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Alamgir, Mohammed, Campbell, Mason J., Sloan, Sean, and Laurance, William F. (2018) Infrastructure expansion and the Indonesian Borneo tropical forests. In: Abstracts from the 55th Annual Meeting of of the Association of Tropical Biology Conservation. 212. p. 36. From: ATBC 2018: 55th Annual Meeting of of the Association of Tropical Biology Conservation: linking natural history and the conservation of tomorrow's tropical ecosystems, 1-5th July 2018, Kuching, Malaysia.

Alamgir, Mohammed, Campbell, Mason J., Sloan, Sean, Phin, Wong Ee, and Laurance, William F. (2018) Road risks and environmental impact assessments in Malaysian road infrastructure projects. Jurutera, February 2018. pp. 13-16.

Alamgir, Mohammed (2017) Road infrastructure planning in Kalimantan, Indonesia. In: [Presented at Infrastructure in the Asia-Pacific: Promoting Benefits & Limiting Environmental Risks]. From: Infrastructure in the Asia-Pacific: Promoting Benefits & Limiting Environmental Risks, 5 October 2017, Kuala Lumpur, Malaysia.

Alvarez-Romero, Jorge G., Devlin, Michelle, da Silva, Eduardo Teixeira, Petus, Caroline, Ban, Natalie C., Pressey, Robert L., Kool, Johnathan, Roberts, Jason J., Cerdeira-Estrada, Sergio, Wenger, Amelia S., and Brodie, Jon (2013) A novel approach to model exposure of coastal-marine ecosystems to riverine flood plumes based on remote sensing techniques. Journal of Environmental Management, 119. pp. 194-207.

Amies, R.L., Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report February 2013. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

Alquezar, Ralph, Glendenning, Lionel, and Costanzo, Simon (2013) The use of the brown macroalgae, Sargassum flavicans, as a potential bioindicator of industrial nutrient enrichment. Marine Pollution Bulletin, 77 (1-2). pp. 140-146.

Anderson-Berry, L.J. (2003) Community Vulnerability to Tropical Cyclones: Cairns, 1996–2000. Natural Hazards, 30 (2). pp. 209-232.

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Barber, Marcus, Addison, Jane, Austin, Jim, Bruce, Caroline, Ebner, Brendan, Higgins, Andrew, Horner, Nerida, Jarvis, Diane, Kenyon, Rob, Lau, Jacqui, Merrin, Linda, Macintosh, Andrew, Philip, Seonaid, Pollino, Carmel, Ponce Reyes, Rocio, Stratford, Danial, Waschka, Marie, and O'Sullivan, Jackie (2018) Chapter 3: Living and built environment of the Darwin catchments. Report Section. CSIRO, Canberra, ACT, Australia.

Bryant, Catherine, Davies, Jaclyn, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring: November 2015 - February 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Banhalmi-Zakar, Zsuzsa, and Vammen Larsen, Sanne (2015) How strategic environmental assessment can inform lenders about potential environmental risks. Impact Assessment and Project Appraisal, 33 (1). pp. 68-72.

Beeden, Roger, Maynard, Jeffrey, Puotinen, Marjetta, Marshall, Paul, Dryden, Jen, Goldberg, Jeremy, and Williams, Gareth (2015) Impacts and recovery from severe tropical cyclone Yasi on the Great Barrier Reef. PLoS ONE, 10. e0121272.

Bryant, Catherine, and Reason, Carissa (2014) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring May - July 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Bryant, C., Davies, J.D., Jarvis, J.C., Tol, S., and Rasheed, M. (2014) Seagrasses in Port Curtis & Rodds Bay 2013: annual long term monitoring, biannual western basin surveys & updated baseline survey. Report. TropWATER, James Cook University, Cairns.

Bartley, Rebecca, Bainbridge, Zoe T., Lewis, Stephen E., Kroon, Frederieke J., Wilkinson, Scott N., Brodie, Jon E., and Silburn, D. Mark (2014) Relating sediment impacts on coral reefs to watershed sources, processes and management: a review. Science of the Total Environment, 468-469. pp. 1138-1153.

Bryant, C., Davies, J., Sankey, T., Jarvis, J., and Rasheed, M. (2014) Long Term Seagrass Monitoring in Port Curtis: quarterly seagrass assessments & permanent transect monitoring progress report 2009 to 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Burns, Kathryn A. (2014) PAHs in the Great Barrier Reef Lagoon reach potentially toxic levels from coal port activities. Estuarine, Coastal and Shelf Science , 144. pp. 39-45.

Berry, Kathryn L.E., Seemann, Janina, Dellwig, Olaf, Struck, Ulrich, Wild, Christian, and Leinfelder, Reinhold R. (2013) Sources and spatial distribution of heavy metals in scleractinian coral tissues and sediments from the Bocas del Toro Archipelago, Panama. Environmental Monitoring and Assessment, 185 (11). pp. 9089-9099.

Ban, Natalie C., Bodtker, Karin M., Nicolson, David, Robb, Carolyn K., Royle, Krista, and Short, Charlie (2013) Setting the stage for marine spatial planning: ecological and social data collation and analyses in Canada's Pacific waters. Marine Policy, 39. pp. 11-20.

Bird, Deanne, King, David, Haynes, Katharine, Box, Pamela, Okada, Tetsuya, and Nairn, Kate (2013) Impact of the 2010-11 Floods and the Factors that Inhibit and Enable Household Adaptation Strategies. Report. National Climate Change Adaptation Research Facility, Gold Coast, QLD, Australia.

Brodie, Jon, Waterhouse, Jane, Maynard, Jeffrey, Bennett, John, Furnas, Miles, Devlin, Michelle, Lewis, Stephen, Collier, Catherine, Schaffelke, Britta, Fabricius, Katharina, Petus, Caroline, da Silva, Eduardo, Zeh, Daniel, Randall, Lucy, Brando, Vittorio, McKenzie, Len, O'Brien, Dominique, Smith, Rachael, Warne, Michael, Brinkman, Richard, Tonin, Hemerson, Bainbridge, Zoe, Bartley, Rebecca, Negri, Andrew, Turner, Ryan, Davis, Aaron, Bentley, Christie, Mueller, Jochen, Alvarez-Romero, Jorge, Henry, Nyssa, Waters, David, Yorkston, Hugh, and Tracey, Dieter (2013) Assessment of the relative risk of water quality to ecosystems of the Great Barrier Reef. A report to the Department of the Environment and Heritage Protection, Queensland Government, Brisbane - Report 13/28. Report. James Cook University, Townsville, QLD, Australia.

Bird, Deanne, Box, Pamela, Okada, Tetsuya, Haynes, Katharine, and King, David (2013) Response, recovery and adaptation in flood-affected communities in Queensland and Victoria. Australian Journal of Emergency Management, 28 (4). pp. 36-43.

Byrnes, Peter, Goosem, Miriam, and Turton, Stephen M. (2012) Are less vocal rainforest mammals susceptible to impacts from traffic noise? Wildlife Research, 39 (4). pp. 355-365.

Boon, Helen J., Millar, Joanne, Lake, David, Cottrell, Alison, and King, David (2012) Recovery from Disaster: resilience, adaptability and perceptions of climate change. National Climate Change Adaptation Research Facility, Gold Coast.

Brodie, J.E., Kroon, F.J., Schaffelke, B., Wolanski, E.C., Lewis, S.E., Devlin, M.J., Bohnet, I.C., Bainbridge, Z.T., Waterhouse, J., and Davis, A.M. (2012) Terrestrial pollutant runoff to the Great Barrier Reef: an update of issues, priorities and management responses. Marine Pollution Bulletin, 65 (4-9). pp. 81-100.

Brodie, Jon, Wolanski, Eric, Lewis, Stephen, and Bainbridge, Zoe (2012) An assessment of residence times of land-sourced contaminants in the Great Barrier Reef lagoon and the implications for management and reef recovery. Marine Pollution Bulletin, 65 (4-9). pp. 267-279.

Brown, Lawrence, Buettner, Petra, and Canyon, Deon V. (2012) The energy burden and environmental impact of health services. American Journal of Public Health, 102 (12). e76. pp. 1-8.

Brodie, J.E., Devlin, M., Haynes, D., and Waterhouse, J. (2011) Assessment of the eutrophication status of the Great Barrier Reef lagoon (Australia). Biogeochemistry, 106 (2). pp. 281-302.

Bricker, Suzanne, and Devlin, Michelle (2011) Preface: "Eutrophication" issue of Biogeochemistry. Biogeochemistry, 106 (2). pp. 135-136.

Ben-Hamadou, R., Atanasova, N., and Wolanski, E. (2011) Ecohydrology modeling: tools for management. In: Wolanski, Eric, McLusky, Donald, Chícharo, L., and Zalewski, M., (eds.) Ecohydrology and Restoration. Treatise on Estuarine and Coastal Science, 10 . Academic Press, London, UK, pp. 301-328.

Ban, Natalie C., Alidina, Hussein M., and Ardron, Jeff A. (2010) Cumulative impact mapping: advances, relevance and limitations to marine management and conservation, using Canada’s Pacific waters as a case study. Marine Policy, 34 (5). pp. 876-886.

Brown, Lawrence H. (2010) Carbon footprinting and health care systems: issues for sustaining the next 100 years of tropical medicine. In: Papers from the Annual Scientific Meeting of the Australasian College of Tropical Medicine (11) p. 66. From: Annual Scientific Meeting of the Australasian College of Tropical Medicine: 100 years of tropical medicine conference, 11-14 June 2010, Townsville, QLD, Australia.

Brodie, Jon, Schroeder, Thomas, Rohde, Ken, Faithful, John, Masters, Bronwyn, Dekker, Arnold, Brando, Vittorio, and Maughan, Mirjam (2010) Dispersal of suspended sediments and nutrients in the Great Barrier Reef lagoon during river-discharge events: conclusions from satellite remote sensing and concurrent flood-plume sampling. Marine and Freshwater Research, 61 (6). pp. 651-664.

Balston, Jacqueline (2009) An analysis of the impacts of long-term climate variability on the commercial barramundi (Lates calcarifer) fishery of north-east Queensland, Australia. Fisheries Research, 99 (2). pp. 83-89.

Bainbridge, Zoe T., Brodie, Jon E. , Faithful, John W., Sydes, Damon A., and Lewis, Stephen E. (2009) Identifying the land-based sources of suspended sediments, nutrients and pesticides discharged to the Great Barrier Reef from the Tully–Murray Basin, Queensland, Australia. Marine and Freshwater Research, 60 (11). pp. 1081-1090.

Blanchard, Ian, and Brown, Lawrence H. (2009) Carbon footprinting of emergency medical services systems: a proof-of-concept study. Prehospital Emergency Care, 13 (4). pp. 546-549.

Balston, Jacqueline (2009) Short-term climate variability and the commercial barramundi (Lates calcarifer) fishery of north-east Queensland, Australia. Marine and Freshwater Research, 60 (9). pp. 912-923.

Broderick, Kathleen (2007) Getting a handle on social-ecological systems in catchments: the nature and importance of environmental perception. Australian Geographer, 38 (3). pp. 297-308.

Butler, Barry, Loong, Dom, and Burrows, Damien (2007) Accumulation of metals in stream sediments of the Upper Walsh River Catchment, North Queensland. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.

Ban, Natalie, and Alder, Jackie (2007) How wild is the ocean? Assessing the intensity of anthropogenic marine activities in British Columbia, Canada. Aquatic Conservation: marine and freshwater ecosystems , 18 (1). pp. 55-85.

Balston, Jacqueline Marie (2007) An examination of the impacts of climate variability and climate change on the wild barramundi (Lates calcarifer): a tropical estuarine fishery of north-eastern Queensland, Australia. PhD thesis, James Cook University.

Bell, Alicia M., and Duke, Norman C. (2005) Effects of Photosystem II-inhibiting herbicides on mangroves: preliminary toxicology trials. Marine Pollution Bulletin, 51 (1-4). pp. 297-307.

Brodie, Jon E., and Devlin, Michelle (2004) Exposure of Great Barrier Reef reefs to land-sourced contaminants: changes due to catchment agricultural development. In: Proceedings of the 10th International Coral Reef Symposium. p. 79. From: 10th International Coral Reef Symposium, 28 June - 2 July 2004, Okinawa, Japan.

Burns, K.A., Codi, S., and Duke, N.C. (2000) Gladstone, Australia field studies: weathering and degradation of hydrocarbons in oiled mangrove and salt marsh sediments with and without the application of an experimental bioremediation protocol. Marine Pollution Bulletin, 41 (7-12). pp. 392-402.

Brodie, Jon (2000) Keeping the wolf from the door: managing land-based threats to the Great Barrier Reef. In: Proceedings of the 9th International Coral Reef Symposium (2) pp. 705-714. From: Ninth International Coral Reef Symposium, 23-27 October 2000, Bali, Indonesia.

Burns, K.A., Cody, S., Swannell, R.J.P., and Duke, N.C. (1999) Assessing the oil degradation potential of endogenous micro-organisms in tropical marine wetland. Mangroves and Salt Marshes, 3 (2). pp. 67-83.

Burns, Kathy, Codi, Susan, Pratt, Catherine, and Duke, Norman (1999) Weathering of hydrocarbons in mangrove sediments: testing the effects of using dispersants to treat oil spills. Organic Geochemistry, 30. pp. 1273-1286.

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Critchell, Kay Lilian (2018) Using hydrodynamic models to understand the impacts and risks of plastic pollution. PhD thesis, James Cook University.

Chipchase, T., and Awal, S. (2012) Investigation into the suitability of inland ground saline water for the growth of marine microalgae for industrial purposes. International Journal on Algae, 14 (1). pp. 79-92.

Curnock, Matthew, Birtles, Alastair, and Valentine, Peter (2011) Mechanisms for assessing the sustainability of swim-with-whales tourism in the Great Barrier Reef. In: 3rd Australian National Network in Marine Science Conference. pp. 1-5. From: 3rd Australian National Network in Marine Science Conference, 29 November - 1 December 2011, Perth. (Unpublished)

Collier, Catherine J., Lavery, Paul S., Ralph, Peter J., and Masini, Raymond J. (2009) Shade-induced response and recovery of the seagrass Posidonia sinuosa. Journal of Experimental Marine Biology and Ecology, 370 (1-2). pp. 89-103.

Curnock, Matthew, Birtles, Alastair, and Valentine, Peter (2009) Key steps towards adaptive management of a whalewatching industry: developing sustainability objectives and indicators for the swimming-with-dwarf minke whales activity in the Great Barrier Reef. In: 18th Biennial Conference on the Biology of Marine Mammals. p. 1. From: 18th Biennial Conference on the Biology of Marine Mammals, 12-16 October 2009, Quebec. (Unpublished)

Costelloe, Marina (2003) Environmental review of the Mary Kathleen uranium mine. Masters (Research) thesis, James Cook University.

Curtis, Ian A. (2002) Environmentally sustainable tourism: a case for carbon trading at northern Queensland hotels and resorts. Australasian Journal of Environmental Management, 9 (1). pp. 27-36.

Chilvers, B. Louise, and Corkeron, Peter J. (2001) Trawling and bottlenose dolphins' social structure. Proceedings of the Royal Society of London: Biological Sciences, 268 (1479). pp. 1901-1905.

Calvert, Gregor Alan (2001) The effects of cattle grazing on vegetation diversity and structural characteristics in the semi-arid rangelands of North Queensland. PhD thesis, James Cook University.

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Death, Russell, Canning, Adam, Magierowski, Regina, and Tonkin, Jonathan (2018) Why aren't we managing water quality to protect ecological health? In: [Presented at the 31st Annual FLRC Workshop]. From: 31st Annual FLRC Workshop, 7-9 February 2018, Auckland, New Zealand.

Davies, Jaclyn, Shepherd, Lloyd, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring Update: February - May 2016. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2016) Gladstone Western Basin BPAR Monitoring: August - November 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Scott, Emma, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Duplication BPAR Monitoring: May - August 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Taylor, Helen, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring February/ March - May 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Scott, Emma, Bryant, Catherine, and Rasheed, Michael (2015) Gladstone Western Basin and Channel Duplication BPAR Monitoring: November 2014 - March 2015. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Davies, Jaclyn, Tol, Samantha, and Rasheed, Michael (2015) Port of Townsville annual monitoring and baseline survey: October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Descombes, Patrice, Wisz, Mary S., Leprieur, Fabien, Parravicini, Valerianio, Heine, Christian, Olsen, Steffen M., Swingedouw, Didier, Kulbicki, Michel, Mouillot, David, and Pellissier, Loïc (2015) Forecasted coral reef decline in marine biodiversity hotspots under climate change. Global Change Biology, 21 (7). pp. 2479-2487.

Dale, Allan, Vella, Karen, and Potts, Ruth (2015) Progressing climate change adaptation in the far north through community resilience. Report. Cairns Institute, James Cook University, Cairns, QLD, Australia. (Unpublished)

Dornan, Matthew, and Newton Cain, Theresa (2015) Vanuatu and cyclone Pam: an update on economic, fiscal and development impacts. Report. Asian Development Bank.

Davies, Jaclyn, Bryant, Catherine, and Rasheed, Michael (2014) Gladstone Western Basin and Channel Dupliaction BPAR Monitoring August - October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Dunn, Ryan J.K., Waltham, Nathan J., Benfer, Nathan P., King, Brian A., Lemckert, Charles J., and Zigic, Sasha (2014) Gold Coast Broadwater: southern Moreton Bay, Southeast Queensland (Australia). In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 93-110.

Davis, A.M., Thorburn, P.J., Lewis, S.E., Bainbridge, Z.T., Attard, S.J., Milla, R., and Brodie, J.E. (2013) Environmental impacts of irrigated sugarcane production: Herbicide run-off dynamics from farms and associated drainage systems. Agriculture, Ecosystems and Environment, 180. pp. 123-135.

Devlin, Michelle J., da Silva, Eduardo Teixeira, Petus, Caroline, Wenger, Amelia, Zeh, Daniel, Tracey, Dieter, Álvarez-Romero, Jorge G., and Brodie, Jon (2013) Combining in-situ water quality and remotely sensed data across spatial and temporal scales to measure variability in wet season chlorophyll-a: Great Barrier Reef lagoon (Queensland, Australia). Ecological Processes, 2. 31. pp. 1-22.

Dunn, Ryan J.K., Robertson, David, Teasdale, Peter R., Waltham, Nathan J., and Welsh, David T. (2013) Benthic metabolism and nitrogen dynamics in an urbanised tidal creek: domination of DNRA over denitrificDunnation as a nitrate reduction pathway. Estuarine, Coastal and Shelf Science , 131. pp. 271-281.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Port Curtis and Rodds Bay Seagrass Monitoring Program. Biannual western basin & annual long term monitoring November 2012. Report. TropWATER, James Cook University, Cairns.

DeBose, J.L., Nuttall, M.F., Hickerson, E.L., and Schmahl, G.P. (2013) A high-latitude coral community with an uncertain future: Stetson Bank, northwestern Gulf of Mexico. Coral Reefs, 32 (1). pp. 225-267.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: January 2013 update report. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

Devlin, Michelle, Petus, Caroline, da Silva, Eduardo Teixera, Alvarez-Romero, Jorge, Zeh, Daniel, Waterhouse, Jane, and Brodie, Jon (2013) Mapping of exposure to flood plumes, water types and exposure to pollutants (DIN, TSS) in the Great Barrier Reef: toward the production of operational risk maps for the world's most iconic marine ecosystem. Report Section. James Cook University, Townsville, QLD.

Davies, J.N., McCormack, C.V., Sankey, T.L., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: September 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Dieleman, Wouter I.J., Vicca, Sara, Dijkstra, Feike A., Hagedorn, Frank, Hovenden, Mark J., Larsen, Klaus S., Morgan, Jack A., Volder, Astrid, Beier, Claus, Dukes, Jeffrey S., King, John, Leuzinger, Sebastian, Linder, Sune, Luo, Yiqi, Oren, Ram, De Angelis, Paolo , Tingey, David, Hoosbeek, Marcel R., and Janssens, Ivan A. (2012) Simple additive effects are rare: a quantitative review of plant biomass and soil process responses to combined manipulations of CO2 and temperature. Global Change Biology, 18 (9). pp. 2681-2693.

Davis, Aaron M., Lewis, Stephen E., Bainbridge, Zoë T., Glendenning, Lionel, Turner, Ryan D.R., and Brodie, Jon E. (2012) Dynamics of herbicide transport and partitioning under event flow conditions in the lower Burdekin region, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 182-193.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: November 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: October 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Dieleman, Wouter (2012) Global change effects on soil C and soil C cycling. PhD thesis, James Cook University.

Davies, J.N., McKenna, S.A., Rasheed, M.A., and Taylor, H.A. (2012) Long-term seagrass monitoring in the Port of Thursday Island: February 2012. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Devlin, Michelle, and Lewis, Stephen (2011) Advancing Our Understanding of the Source, Transport and Impacts of Pesticides on the Great Barrier Reef and in Associated Ecosystems: a review of MTSRF research outputs, 2006-2010. Report. Reef and Rainforest Research Centre, Cairns, QLD.

Devlin, Michelle, Bricker, Suzanne, and Painting, Suzanne (2011) Comparison of five methods for assessing impacts of nutrient enrichment using estuarine case studies. Biogeochemistry, 106 (2). pp. 177-205.

Dieleman, Wouter I.J., and Janssens, Ivan A. (2011) Can publication bias affect ecological research? A case study on soil respiration under elevated CO2. New Phytologist, 190 (3). pp. 517-521.

Douglas, Michael, Jackson, Sue, Setterfield, Samantha, Pusey, Brad, Davies, Peter, Kennard, Mark, Burrows, Damien, and Bunn, Stuart (2011) Northern futures: threats and opportunities for freshwater ecosystems. In: Pusey, B.J., (ed.) Aquatic Biodiversity in Northern Australia: Patterns, Threats and Future. CDU Press, Darwin, NT, pp. 203-220.

Dieleman, W.I.J., Luyssaert, S., Rey, A., De Angelis, P., Barton, C.V.M., Broadmeadow, M.S.J., Broadmeadow, S.B., Chigwerewe, K.S., Crookshanks, M., Dufrêne, E., Jarvis, P.G., Kasurinen, A., Kellomäki, S., Le Dantec, V., Liberloo, M., Marek, M., Medlyn, B., Pokorný, R., Scarascia-Mugnozza, G., Temperton, V.M., Tingey, D., Urban, O., Ceulemans, R., and Janssens, I.A. (2010) Soil [N] modulates soil C cycling in CO2-fumigated tree stands: a meta-analysis. Plant, Cell & Environment, 33 (12). pp. 2001-2011.

Doupe, Robert G., Mitchell, Jim, Knott, Matthew J., Davis, Aaron M., and Lymbery, Alan J. (2010) Efficacy of exclusion fencing to protect ephemeral floodplain lagoon habitats from feral pigs (Sus scrofa). Wetlands Ecology and Management, 18 (1). pp. 69-78.

Dowe, John Leslie (2009) A preliminary note on the impact of Cyclone Larry on populations of Archontophoenix alexandrae (Arecaceae), north Queensland, Australia. Palms & Cycads, 102. pp. 4-8.

Dawe, Gregory, and Goosem, Miriam (2008) Noise Disturbance Along Highways: Kuranda Range road upgrade project. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Daley, Ben, and Griggs, Peter (2006) Mining the reefs and cays: coral, guano and rock phosphate extraction in the Great Barrier Reef, 1844-1940. Environment and History, 12 (4). pp. 395-433.

Dixon, Ian, Douglas, Michael, Dowe, John, and Burrows, Damien (2006) Tropical rapid appraisal of riparian condition Version 1 (for use in tropical savannas). UNSPECIFIED. Land and Water Australia, Canberra, Australia.

Doupe, Rob, Froend, Ray, and Pettit, Neil (2006) A comment on allocating regulated river water for the Ord River, Western Australia. Ecological Management and Restoration, 7 (1). pp. 32-36.

Daley, Benjamin (2005) Changes in the Great Barrier Reef since European settlement: implications for contemporary management. PhD thesis, James Cook University.

Duke, Norman C., Bell, Alicia M., Pedersen, Dan K., Roelfsema, Chris M., and Bengston Nash, Susan (2005) Herbicides implicated as the cause of severe mangrove dieback in the Mackay region, NE Australia: consequences for marine plant habitats of the GBR World Heritage Area. Marine Pollution Bulletin, 51 (1-4). pp. 308-324.

Devlin, M.J., and Brodie, J. (2005) Terrestrial discharge into the Great Barrier Reef Lagoon: nutrient behavior in coastal waters. Marine Pollution Bulletin, 51 (1). pp. 9-22.

Dale, Allan, and Crisp, Rosey (2002) Institutionalising social assessment in Queensland: the Social Impact Assessment Unit 1993-1996. In: Dale, Allan, Taylor, Nick, and Lane, Marcus, (eds.) Social Assessment in Natural Resource Management Institutions. CSIRO Publishing, Melbourne, VIC, Australia, pp. 125-135.

Duke, Norman, and Wolanski, Eric (2001) Muddy coastal waters and depleted mangrove coastlines - depleted seagrass and coral reefs. In: Wolanski, Eric, (ed.) Oceanographic Processes of Coral Reefs: physical and biology links in the Great Barrier Reef. CRC Press, Washington, DC, USA, pp. 77-91.

Dinsdale, E.A. (2000) Abundance of black-band disease on corals from one location on the Great Barrier Reef: a comparison with abundance in the Caribbean region. In: Proceedings of the 9th International Coral Reef Symposium (2) pp. 1239-1243. From: Ninth International Coral Reef Symposium, 23-27 October 2000, Bali, Indonesia.

Devlin, M., Waterhouse, J., and Brodie, J.E. (2000) Terrestrial discharge into the Great Barrier Reef: distribution of river waters and pollutant concentrations during flood plumes. In: Proceedings of the 9th International Coral Reef Symposium (2) pp. 1205-1211. From: Ninth International Coral Reef Symposium, 23-27 October 2000, Bali, Indonesia.

Duke, Norman, and Khan, M. Ajmal (1999) Structure and composition of the seaward mangrove forest at Mai Po Marshes Nature Reserve, Hong Kong. In: The mangrove ecosystem of Deep Bay and the Mai Po marshes, Hong Kong : proceedings of the International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, Hong Kong. pp. 83-104. From: International Workshop on the Mangrove Ecosystem of Deep Bay and the Mai Po Marshes, 3-20 September 1993, Hong Kong.

Duke, N.C., Burns, K.A., Ellison, J.C., Rupp, R.J., and Dalhaus, O. (1998) Effects of oil and dispersed-oil on mature mangroves in field trials at Gladstone. APPEA Journal, 38 (2). pp. 637-645.

Duke, N.C., Burns, K.A., and Dalhaus, O. (1998) Effects of oils and dispersed-oils on mangrove seedlings in planthouse experiments: a preliminary assessment of results two months after oil treatments. APPEA Journal, 38 (2). pp. 631-636.

Duke, N.C., Ellison, J.C., and Burns, K.A. (1998) Surveys of oil spill incidents affecting mangrove habitat in Australia: a preliminary assessment of incidents, impacts on mangroves, and recovery of deforested areas. APPEA Journal, 38 (2). pp. 646-654.

Duke, Norman C., Pinzón, Zulelka S., and Prada, Martha C. (1997) Large scale damage to mangrove forests following two large oil spills in Panama. Biotropica, 29 (1). pp. 2-14.

Dale, Allan P., Chapman, Peter, and McDonald, Morag L. (1997) Social impact assessment in Queensland: why practice lags behind legislative opportunity. Impact Assessment and Project Appraisal, 15 (2). pp. 159-179.

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Edmunds, Richard C, Gill, J.A., Baldwin, David H., Linbo, Tiffany L., French, Barbara L., Brown, Tanya L., Esbaugh, Andrew J., Mager, Edward M., Stieglitz, John, Hoenig, Ron, Benetti, Daniel, Grosell, Martin, Scholz, Nathaniel L., and Incardona, John P. (2015) Corresponding morphological and molecular indicators of crude oil toxicity to the developing hearts of mahi mahi. Scientific Reports, 5. 17326.

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