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Andutta, Fernando P., Ridd, Peter V., Deleersnijder, Eric, and Prandle, David (2014) Contaminant exchange rates in estuaries: new formulae accounting for advection and dispersion. Progress in Oceanography, 120. pp. 139-153.

Marchant, Ross, Stevens, Thomas, Choukroun, Severine, Combes, Gavin, Santarossa, Michael, Whinney, James, and Ridd, Peter (2014) A buoyant tethered sphere for marine current estimation. IEEE Journal of Oceanic Engineering, 39 (1). pp. 2-9.

Ridd, Peter V., da Silva, Eduardo Teixeira, and Stieglitz, Thomas (2013) Have coral calcification rates slowed in the last twenty years? Marine Geology, 346. pp. 392-399.

Waters, Jennifer, Wyatt, Lucy R., Wolf, Judith, Hines, Adrian, and UNSPECIFIED (2013) Data assimilation of partitioned HF radar wave data into Wavewatch III. Ocean Modelling, 72. pp. 17-31.

Wang, Yonghong, Oguchi, Takashi, Ridd, Peter V., and Shen, Huanting (2013) Anthropogenic influence on sedimentation during the last 100 years inferred from magnetic properties in the Changjiang Estuary, China. Environmental Earth Sciences, 70 (4). pp. 1671-1680.

Macdonald, Rachael K., Ridd, Peter V., Whinney, James C., Larcombe, Piers, and Neil, David T. (2013) Towards environmental management of water turbidity within open coastal waters of the Great Barrier Reef. Marine Pollution Bulletin, 74 (1). pp. 82-94.

Wyatt, Lucy R., Jaffrés, Jasmine B.D., and Heron, Mal L. (2013) Spatial averaging of HF radar data for wave measurement applications. Journal of Atmospheric and Oceanic Technology, 30 (9). pp. 2216-2224.

Hoeke, Ron K., Storlazzi, Curt D., and Ridd, Peter V. (2013) Drivers of circulation in a fringing coral reef embayment: a wave-flow coupled numerical modeling study of Hanalei Bay, Hawaii. Continental Shelf Research, 58. pp. 79-95.

Jaffrés, Jasmine B.D. (2013) Mixed layer depth seasonality within the Coral Sea based on Argo data. PLoS ONE, 8 (4). pp. 1-13.

Heron, Malcom L., and Atwater, Daniel P. (2013) Temporal and spatial resolution of HF ocean radars. Ocean Science Journal, 48 (1). pp. 99-103.

Andutta, Fernando P. , Ridd, Peter V., and Wolanski, E. (2013) The age and the flushing time of the Great Barrier Reef Waters. Continental Shelf Research, 53. pp. 11-19.

Stieglitz, Thomas C., Clarke, Jordan F., and Hancock, Gary J. (2013) The mangrove pump: the tidal flushing of animal burrows in a tropical mangrove forest determined from radionuclide budgets. Geochimica et Cosmochimica Acta, 102. pp. 12-22.

Orpin, Alan R., and Ridd, Peter V. (2012) Exposure of inshore corals to suspended sediments due to wave-resuspension and river plumes in the central Great Barrier Reef: a reappraisal. Continental Shelf Research, 47. pp. 55-67.

Browne, Nicola K., Smithers, Scott G., Perry, Chris T., and Ridd, Peter V. (2012) A field-based technique for measuring sediment flux on coral reefs: application to turbid reefs on the Great Barrier Reef. Journal of Coastal Research, 28 (5). pp. 1247-1262.

McClanahan, Tim R., Donner, Simon D., Maynard, Jeffrey A., MacNeil, M. Aaron, Graham, Nicholas A.J., Maina, Joseph, Baker, Andrew C., Alemu, Jahson B., Beger, Maria, Campbell, Stuart J., Darling, Emily S., Eakin, C. Mark, Heron, Scott F., Jupiter, Stacy D., Lundquist, Carolyn J., McLeod, Elizabeth, Mumby, Peter J., Paddack, Michelle J., Selig, Elizabeth R., and van Woesik, Robert (2012) Prioritizing key resilience indicators to support coral reef management in a changing climate. PLoS ONE, 7 (8). pp. 1-7.

Chollett, IIiana, Müller-Karger, Frank E., Heron, Scott F., Skirving, William, and Mumby, Peter J. (2012) Seasonal and spatial heterogeneity of recent sea surface temperature trends in the Caribbean Sea and southeast Gulf of Mexico. Marine Pollution Bulletin, 64 (5). pp. 956-965.

Andutta, Fernando P., Kingsford, Michael J., and Wolanski, Eric (2012) 'Sticky water' enables the retention of larvae in a reef mosaic. Estuarine, Coastal and Shelf Science , 101. pp. 54-63.

de Miranda, Luiz Bruner, Olle, Eugenio Dalle, Bergamo, Alessandro Luvizon, dos Santos Silva, Lourval, and Pinheiro Andutta, Fernando (2012) Circulation and salt intrusion in the Piacaguera Channel, Santos (SP). Brazilian Journal of Oceanography, 60 (1). pp. 11-23.

Ridd, Peter V., Larcombe, Piers, Stieglitz, Thomas, and Orpin, Alan (2012) Comment on "Towards ecologically relevant targets for river pollutant loads to the Great Barrier Reef" by F.J. Kroon, Marine Pollution Bulletin 65 (4-9) 261-266. Marine Pollution Bulletin. pp. 1-4.

Lema, Kimberley A., Willis, Bette L., and Bourne, David G. (2012) Corals form characteristic associations with symbiotic nitrogen-fixing bacteria. Applied and Environmental Microbiology, 78 (9). pp. 3136-3144.

Devlin, M.J., McKinna, L.W., Alvarez-Romero, J.G., Petus, C., Abott, B., Harkness, P., and Brodie, J. (2012) Mapping the pollutants in surface riverine flood plume waters in the Great Barrier Reef, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 224-235.

Golbuu, Yimnang, Wolanski, Eric, Idechong, Jacques Wasai, Victor, Steven, Isechal, Adelle Lukes, Oldiais, Noelle Wenty, Idip, David, Richmond, Robert H., and van Woesik, Robert (2012) Predicting coral recruitment in Palau's complex reef archipelago. PLoS ONE, 7 (11). pp. 1-10.

Mantovanelli, A., Heron, M.L., Heron, S.F., and Steinberg, C.R. (2012) Relative dispersion of surface drifters in a barrier reef region. Journal of Geophysical Research, 117 (C11016). pp. 1-15.

Spillman, Claire M., Heron, Scott F., Jury, Mark R., and Anthony, Kenneth R. N. (2011) Climate change and carbon threats to coral reefs: national meteorological and ocean services as sentinels. Bulletin of the Amercian Meteorological Society, 92 (12). pp. 1581-1586.

Andutta, Fernando P., Ridd, Peter V., and Wolanski, Eric (2011) Dynamics of hypersaline coastal waters in the Great Barrier Reef. Estuarine, Coastal and Shelf Science, 94 (4). pp. 299-305.

Cetina-Heredia, Paulina, and Connolly, Sean R. (2011) A simple approximation for larval retention around reefs. Coral Reefs, 30 (3). pp. 593-605.

Hoeke, Ron, Storlazzi, Curt, and Ridd, Peter (2011) Hydrodynamics of a bathymetrically complex fringing coral reef embayment: wave climate, in situ observations, and wave prediction. Journal of Geophysical Research: Oceans, 116. pp. 1-19.

McKinna, Lachlan I.W., Furnas, Miles J., and Ridd, Peter V. (2011) A simple, binary classification algorithm for the detection of Trichodesmium spp. within the Great Barrier Reef using MODIS imagery. Limnology and Oceanography: Methods, 9. pp. 50-66.

Robinson, A.M., Wyatt, L.R., and Howarth, M.J. (2011) A two year comparison between HF radar and ADCP current measurements in Liverpool Bay. Journal Of Operational Oceanography, 4 (1). pp. 33-45.

Everingham, Yvette L., and Reason, C.J.C. (2011) Interannual variability in rainfall and wet spell frequency during the New South Wales sugarcane harvest season. International Journal of Climatology, 31 (1). pp. 144-152.

Wyatt, Lucy R., Green, J.Jim, and Middleditch, A. (2011) HF radar data quality requirements for wave measurement. Coastal engineering, 58 (4). pp. 327-336.

Wang, W., and Wyatt, L.R. (2011) Radio frequency interference cancellation for sea-state remote sensing by high-frequency radar. IET Radar, Sonar and Navigation, 5 (4). pp. 405-415.

Viikmäe, B., Soomere, T., Parnell, K.E., and Delpeche, N. (2011) Spatial planning of shipping and offshore activities in the Baltic Sea using Lagrangian trajectories. Journal of Coastal Research, SI 64. pp. 956-960.

Ridd, Peter V., Orpin, Alan R., Stieglitz, Thomas C., and Brunskill, Gregg J. (2011) Will reducing agricultural runoff drive recovery of coral biodiversity and macroalgae cover on the Great Barrier Reef? Ecological Applications, 21 (8). pp. 3332-3335.

Eakin, C. Mark, Morgan, Jessica A., Heron, Scott F., Smith, Tyler B., Lui, Gang, Alvarez-Filip, Lorenzo, Baca, Bart, Bartels, Erich, Bastidas, Carolina, Bouchon, Claude, Brandt, Marilyn, Bruckner, Andrew W., Bunkley-Williams, Lucy, Cameron, Andrew, Causey, Billy D., Chiappone, Mark, Christensen, Tyler R.L., Crabbe, M. James C., Day, Owen, de la Guardia, Elena, Díaz-Pulido, Guillermo, DiResta, Daniel, Gil-Agudelo, Diego L., Gilliam, David S., Ginsburg, Robert N., Gore, Shannon, Guzmán, Héctor M., Hendee, James C., Hernández-Delgado, Edwin A., Husain, Ellen, Jeffrey, Christopher F.G., Jones, Ross J., Jordán-Dahlgren, Eric, Kaufman, Les S., Kline, David I., Kramer, Philip A., Lang, Judith C., Lirman, Diego, Mallela, Jennie, Manfrino, Carrie, Maréchal, Jean-Phillipe, Marks, Ken, Mihaly, Jennifer, Miller, W. Jeff, Mueller, Erich M., Muller, Erinn M., Toro, Carlos A. Orozco, Oxenford, Hazel A., Ponce-Taylor, Daniel, Quinn, Norman, Ritchie, Kim B., Rodríguez, Sebastián, Ramírez, Alberto Rodríguez, Romano, Sandra, Samhouri, Jameal F., Sánchez, Juan A., Schmahl, George P., Shank, Burton V., Skirving, William J., Steiner, Sascha C.C., Villamizar, Estrella, Walsh, Shiela M., Walter, Cory, Weil, Ernesto, Williams, Ernest H., Roberson, Kimberly Woody, and Yusuf, Yusri (2010) Caribbean corals in crisis: record thermal stress, bleaching, and mortality in 2005. PLoS ONE, 5 (11). e13969.

Heron, S.F., Steinberg, C.R., Heron, M.L., Mantovanelli, A., Jaffrés, Jasmine, Skirving, W.J., McAllister, F., Rigby, P., Wisdom, D., and Bainbridge, S. (2010) Advancing ocean monitoring near coral reefs. EOS, 91 (41). pp. 369-380.

Heron, Scott F., Willis, Bette L., Skirving, William J., Eakin, C. Mark, Page, Cathie A., and Miller, Ian R. (2010) Summer hot snaps and winter conditions: modelling white syndrome outbreaks on Great Barrier Reef corals. PLoS ONE, 5 (8). pp. 1-11.

Koubbi, Philippe, Ozouf-Costaz, Catherine, Goarant, Anne, Moteki, Masato, Hulley, Percy-Alexander, Causse, Romain, Dettai, Agnès, Duhamel, Guy, Pruvost, Patrice, Tavernier, Eric, Post, Alexandra L., Beaman, Robin J., Rintoul, Stephen R., Hirawake, Toru, Hirano, Diasuke, Ishimaru, Takashi, Riddle, Martin, and Hosie, Graham (2010) Estimating the biodiversity of the East Antarctic shelf and oceanic zone for ecoregionalisation: example of the ichthyofauna of the CEAMARC (Collaborative East Antarctic Marine Census) CAML surveys. Polar Science, 4 (2). pp. 115-133.

Stieglitz, Thomas C., Cook, Peter G., and Burnett, William C. (2010) Inferring coastal processes from regional-scale mapping of 222Radon and salinity: examples from the Great Barrier Reef, Australia. Journal of Environmental Radioactivity, 101 (7). pp. 544-552.

Choukroun, Séverine, Ridd, Peter V., Brinkman, Richard, and McKinna, Lachlan I.W. (2010) On the surface circulation in the western Coral Sea and residence times in the Great Barrier Reef. Journal of Geophysical Research: oceans, 115. pp. 1-13.

Renagi, Ora, Ridd, Peter, and Stieglitz, Thomas (2010) Quantifying the suspended sediment discharge to the ocean from the Markham River, Papua New Guinea. Continental Shelf Research, 30 (9). pp. 1030-1041.

Viikmäe, Bert, Soomere, Tarmo, Viidebaum, Mikk, and Berezovski , Mihhail (2010) Temporal scales for transport patterns in the Gulf of Finland. Estonian Journal of Engineering, 16 (3). pp. 211-227.

Kench, Paul, Brander, Robert W., Parnell, Kevin E., and O'Callaghan, J.M. (2009) Seasonal variations in wave characteristics around a coral reef island, South Maalhosmadulu atoll, Maldives. Marine Geology, 262 (1-4). pp. 116-129.

Hollins, Suzanne E., Heron, Scott F., and Ridd, Peter V. (2009) Methods for monitoring tidal flushing in large animal burrows in tropical mangrove swamps. Estuarine, Coastal and Shelf Science, 82 (4). pp. 615-620.

Kelpsaite, L., Parnell, K.E., and Soomere, T. (2009) Energy pollution: the relative influence of wind-wave and vessel-wake energy in Tallinn Bay, the Baltic Sea. Journal of Coastal Research, 56 (1). pp. 812-816.

Soomere, Tarmo, Parnell, K.E., and Keevallik, Sirje (2009) Preface. Special issue on ocenaography, meterology and coastal engineering. Estonian Journal of Engineering, 15 (3). pp. 149-150.

Didenkulova, I., Parnell, K.E., Soomere, T., Pelinovsky, E., and Kurennoy, D. (2009) Shoaling and runup of long waves induced by high-speed ferries in Tallinn Bay. Journal of Coastal Research, 56 (1). pp. 491-495.

Wyatt, Lucy R., Green, J.Jim, and Middleditch, Andrew (2009) Signal sampling impacts on HF radar wave measurement. Journal of Atmospheric and Oceanic Technology, 26 (4). pp. 793-805.

Torsvik, T., Didenkulova, I., Soomere, T., and Parnell, Kevin E. (2009) Variability in spatial patterns of long nonlinear waves from fast ferries in Tallinn Bay. Nonlinear Processes in Geophysics, 16 (2). pp. 351-363.

Kurennoy, D., Soomere, T., and Parnell, K.E. (2009) Variability in the properties of wakes generated by high-speed ferries. Journal of Coastal Research, 56 (1). pp. 519-523.

Heron, M.L., Prytz, A., Heron, S.F., Helzel, T., Schlick, T., Greenslade, D.J.M., Schulz, E., and Skirving, W.J. (2008) Tsunami observations by coastal ocean radar. International Journal of Remote Sensing, 29 (21). pp. 6347-6359.

Mantovanelli, A., and Ridd, P.V. (2008) SEDVEL: an underwater balance for measuring in situ settling velocities and suspended cohesive sediment concentrations. Journal of Sea Research, 60 (4). pp. 235-245.

Povinec, P.P., Bokuniewicz, H., Burnett, W.C., Cable, J., Charette, M., Comanducci, J.-F., Kontar, E.A., Moore, W.S., Oberdorfer, J.A., de Oliveira, J., Peterson, R., Stieglitz, T., and Taniguchi, M. (2008) Isotope tracing of submarine groundwater discharge offshore Ubatuba, Brazil: results of the IAEA–UNESCO SGD project. Journal of Environmental Radioactivity, 99 (10). pp. 1596-1610.

Cooper, Timothy F., Ridd, Peter V., Ulstrup, Karin E., Humphrey, Craig, Slivokoff, Matthew, and Fabricius, Katharina E. (2008) Temporal dynamics in coral bioindicators for water quality on coastal coral reefs of the Great Barrier Reef. Marine and Freshwater Research, 59 (8). pp. 703-716.

Lambrechts, Jonathan, Hanert, Emmanuel, Deleersnijder, Eric, Bernard, Paul-Emile, Legat, Vincent, Remacle, Jean-Francois, and Wolanski, Eric (2008) A multi-scale model of the hydrodynamics of the whole Great Barrier Reef. Estuarine, Coastal and Shelf Science , 79 (1). pp. 143-151.

Stieglitz, Thomas, Rapaglia, John, and Bokuniewicz, Henry (2008) Estimation of submarine groundwater discharge from bulk ground electrical conductivity measurements. Journal of Geophysical Research: oceans, 113. - .

Heron, S.F., and Ridd, P.V. (2008) The tidal flushing of multiple-loop animal burrows. Estuarine, Coastal and Shelf Science , 78 (1). pp. 135-144.

Wolanski, Eric, Fabricius, Katharina E., Cooper, Timothy F., and Humphrey, Craig (2008) Wet season fine sediment dynamics on the inner shelf of the Great Barrier Reef. Estuarine, Coastal and Shelf Science , 77 (4). pp. 755-762.

Mao, Yadan, and Heron, Malcolm L. (2008) The influence of fetch on the response of surface currents to wind studied by HF ocean surface radar. Journal of Physical Oceanography, 38 (5). pp. 1107-1121.

White, Laurent, and Wolanski, Eric (2008) Flow separation and vertical motions in a tidal flow interacting with a shallow-water island. Estuarine, Coastal and Shelf Science , 77 (3). pp. 457-466.

Taniguchi, M., Stieglitz, T., and Ishitobi, T. (2008) Temporal variability of water quality of submarine groundwater discharge in Ubatuba, Brazil. Estuarine, Coastal and Shelf Science , 76 (3). pp. 484-492.

Parnell, Kevin, Delpeche, Nicole, Didenkulova, Ira, Dolphin, Tony, Erm, Ants, Kask, Andres, Kelpsaite, Loreta, Kurennoy, Dimitry, Quak, Ewald, Raamet, Andrus, Soomere, Tarmo, Terentjeva, Anna, Torsvik, Tomas, and Zaitseva-Parnaste, Inga (2008) Far-field vessel wakes in Tallinn Bay. Estonian Journal of Engineering, 14 (4). pp. 273-302.

Fass, T., Cook, P.G., Stieglitz, T., and Herczeg, A.L. (2007) Development of saline ground water through transpiration of sea water. Ground Water, 45 (6). pp. 703-710.

Wang, Yonghong, Heron, Malcolm M., Prytz, Arnstein, Ridd, Peter V., Steinberg, Craig R., and Hacker, Jörg M. (2007) Evaluation of a new airborne microwave remote sensing radiometer by measuring the salinity gradients across the shelf of the Great Barrier Reef lagoon. IEEE Transactions on Geoscience and Remote Sensing, 45 (11). pp. 3701-3709.

Allison, Nicola, Finch, Adrian A., Webster, Jody M., and Clague, David A. (2007) Palaeoenvironmental records from fossil corals: the effects of submarine diagenesis on temperature and climate estimates. Geochimica et Cosmochimica Acta, 71 (19). pp. 4693-4703.

Kosnik, Matthew A., Hua, Quan, Jacobsen, Geraldine E., Kaufman, Darrell S., and Wust, Raphael A. (2007) Sediment mixing and stratigraphic disorder revealed by the age-structure of Tellina shells in Great Barrier Reef sediment. Geology, 35 (9). pp. 811-814.

Stieglitz, Thomas C., Rapaglia, John, and Krupa, Steven C. (2007) An effect of pier pilings on nearshore submarine groundwater discharge from a (partially) confined aquifer. Estuaries and Coasts, 30 (3). pp. 543-550.

Holliday, D., Stieglitz, T.C., Ridd, P.V., and Read, W.W. (2007) Geological controls and tidal forcing of submarine groundwater discharge from a confined aquifer in a coastal sand dune system. Journal of Geophysical Research: oceans, 112. pp. 1-10.

Webster, Jody M., Wallace, Laura M., Clague, David A., and Braga, Juan Carlos (2007) Numerical modeling of the growth and drowning of Hawaiian coral reefs during the last two glacial cycles (0-250 kyr). G3: Geochemistry, Geophysics, Geosystems, 8 (3). pp. 1-23.

Luick, John L., Mason, Luciano, Hardy, Thomas, and Furnas, Miles J. (2007) Circulation in the Great Barrier Reef Lagoon using numerical tracers and in situ data. Continental Shelf Research, 27 (6). pp. 757-778.

Ridd, Peter V. (2007) A critique of a method to determine long-term decline of coral reef ecosystems. Energy and Environment, 18 (6). pp. 783-796.

Heron, Malcolm L., Skirving, William J., and Michael, Kelvin J. (2006) Short-wave ocean wave slope models for use in remote sensing data analysis. IEEE: transactions on geoscience and remote sensing, 44 (7). pp. 1962-1973.

Bode, Michael, Bode, Lance, and Armsworth, Paul R. (2006) Larval dispersal reveals regional sources and sinks in the Great Barrier Reef. Marine Ecology Progress Series, 308. pp. 17-25.

Cummins, Phil, and Goldberg, Jeremy (2005) Earthquakes, plate tectonics and the Indian Ocean tsunami. Status of coral reefs in tsunami affected countries: 2005, 2005. pp. 7-30.

Bode, Lance, and Mason, Luciano B. (2005) Evaluation of a nonlinear reef parametrisation for steady flows. ANZIAM Journal, 46 (E). pp. 1017-1034.

Greiner, R., Herr, A., Brodie, J., and Haynes, D. (2005) A multi-criteria approach to Great Barrier Reef catchment (Queensland, Australia) diffuse-source pollution problem. Marine Pollution Bulletin, 51 (1). pp. 128-137.

Anthony, Kenneth R.N., Ridd, Peter V., Orpin, Alan R., Larcombe, Piers, and Lough, Janice (2004) Temporal variation of light availability in coastal benthic habitats : effects of clouds, turbidity, and tides. Limnology and Oceanography, 49 (6). pp. 2201-2211.

Orpin, Alan R., Ridd, Peter V., Thomas, Séverine, Anthony, Kenneth R.N., Marshall, Paul, and Oliver, Jamie (2004) Natural turbidity variability and weather forecasts in risk management of anthropogenic sediment discharge near sensitive environments. Marine Pollution Bulletin, 49 (7). pp. 602-612.

Halide, Halmar, Brinkman, Richard, and Ridd, Peter (2004) Designing bamboo wave attenuators for mangrove plantations. Indian Journal of Marine Sciences, 33 (3). pp. 220-225.

Thomas, Séverine, and Ridd, Peter V. (2004) Review of methods to measure short time scale sediment accumulation. Marine Geology, 207 (1-4). pp. 95-114.

de Silva Samarasinghe, J.R., Bode, L., and Mason, L.B. (2003) Modelled response of Gulf St Vincent (South Australia) to evaporation, heating and winds. Continental Shelf Research, 23 (14). pp. 1285-1313.

Burrage, D.M., Steinberg, C.R., Mason, L.B., and Bode, L. (2003) Tidal corrections for TOPEX altimetry in the Coral Sea and Great Barrier Reef Lagoon: comparisons with long-term tide gauge records. Journal of Geophysical Research: oceans, 108 (C7). 34-1.

Harris, Peter T, and Beaman, Robin J (2003) Processes controlling the formation of the Mertz Drift, George Vth continental shelf, East Antarctica: evidence from 3.5 kHz sub-bottom profiling and sediment cores. Deep-sea Research. Part II: topical studies in oceanography, 50 (8-9). pp. 1463-1480.

Nott, Jonathan (2003) Waves, coastal boulder deposits and the importance of the pre-transport setting. Earth and Planetary Science Letters, 210 (1-2). pp. 269-276.

Nott, Jonathan (2003) Tsunami or storm waves?: determining the origin of a spectacular field of wave emplaced boulders using numerical storm surge and wave models and hydrodynamic transport equations. Journal of Coastal Research, 19 (2). pp. 348-356.

Bryce, S., Larcombe, P., and Ridd, P.V. (2003) Hydrodynamic and geomorphological controls on suspended sediment transport in mangrove creek systems, a case study: Cocoa Creek, Townsville, Australia. Estuarine, Coastal and Shelf Science, 56 (3-4). pp. 415-431.

Williams, J.J., O'Connor, B.A., Arens, S.M., Abadie, S., Bell, P., Balouin, Y., Van Boxel, J.H., Do Carmo, A.J., Davidson, M., Ferreira, O., Heron, M., Howa, H., Hughes, Z., Kaczmarek, L.M., Kim, H., Morris, B., Nicholson, J., Pan, S., Salles, P., Silva, A., Smith, J., Soares, C., and Vila-Concejo, A. (2003) Tidal inlet function: field evidence and numerical simulation in the India project. Journal of Coastal Research, 19 (1). pp. 189-211.

Burrage, D.M., Heron, M.L., Hacker, J.M., Stieglitz, T.C., Steinberg, C.R., and Prytz, A. (2002) Evolution and dynamics of tropical river plumes in the Great Barrier Reef: an integrated remote sensing and in situ study. Journal of Geophysical Research: oceans, 107 (12). pp. 1-17.

Hendy, Erica J., Gagan, Michael K., Alibert, Chantal A., McCulloch, Malcolm T., Lough, Janice M, and Isdale, Peter J. (2002) Abrupt decrease in tropical Pacific sea surface salinity at end of Little Ice Age. Science, 295 (5559). pp. 1511-1514.

Heron, Malcolm L. (2002) Applying a unified directional wave spectrum to the remote sensing of wind wave directional spreading. Canadian Journal of Remote Sensing, 28 (3). pp. 346-353.

Thomas, Severine, Ridd, Peter V., and Smith, Peter J. (2002) New instrumentation for sediment dynamics studies. Marine Technology Society Journal, 36 (1). pp. 55-58.

Burrage, Derek M., Goodberlet, Mark A., and Heron, Malcom (2002) Simulating passive microwave radiometer designs using Simulink. SIMULATION: Transactions of The Society for Modeling and Simulation International, 78 (1). pp. 36-55.

Heron, Malcolm L., and Prytz, Arnstein (2002) Wave height and wind direction from the HF coastal ocean surface radar. Canadian Journal of Remote Sensing, 28 (3). pp. 385-393.

Heron, S.F., and Ridd, P.V. (2001) The use of computational fluid dynamics in predicting the tidal flushing of animal burrows. Estuarine, Coastal and Shelf Science , 52 (4). pp. 411-421.

Stieglitz, Thomas, and Ridd, Peter V. (2001) Trapping of mangrove propagules due to density-driven secondary circulation in the Normanby River estuary, NE Australia. Marine Ecology-Progress Series, 211. pp. 131-142.

Ridd, P., Day, G., Thomas, S., Harradence, J., Fox, D., Bunt, J., Renagi, O., and Jago, C. (2001) Measurement of sediment deposition rates using an optical backscatter sensor. Estuarine, Coastal and Shelf Science , 52 (2). pp. 155-163.

Stirling, C.H., Esat, T.M., Lambech, K., McCulloch, M.T., Blake, S.G., Lee, D-C., and Halliday, A.N. (2001) Orbital forcing of the marine isotope stage 9 interglacial. Science, 291 (5502). pp. 290-293.

Harris, Peter T, Brancolini, Giuliano, Armand, Leanne, Brusetti, Martina, Beaman, Robin J, Giorgetti, Giovanna, Presti, Massimo, and Trincardi, Fabio (2001) Continental shelf drift deposit indicates non-steady state Antarctic bottom water production in the Holocene. Marine Geology, 179 (1-2). pp. 1-8.

Heron, M.L., and Heron, S.F. (2001) Cumulative probability noise analysis in geophysical spectral records. International Journal of Remote Sensing, 22 (13). pp. 2537-2544.

Hollins, S.E., Ridd, P.V., and Read, W.W. (2000) Measurement of the diffusion coefficient for salt in salt flat and mangrove soils. Wetlands Ecology and Management, 8 (4). pp. 257-262.

Stieglitz, Thomas, Ridd, Peter, and Muller, Paul (2000) Passive irrigation and functional morphology of crustacean burrows in a tropical mangrove swamp. Hydrobiologia: the international journal on limnology and marine sciences, 421 (1). pp. 69-76.

Stieglitz, Thomas, Ridd, Peter V., and Hollins, Suzanne (2000) A small sensor for detecting animal burrows and monitoring burrow water conductivity. Wetlands Ecology and Management, 8 (1). pp. 1-7.

Heron, S.F., and Heron, M.L. (1998) A Comparison of algorithms for extracting significant wave height from HF radar ocean backscatter spectra. Journal of Atmospheric and Oceanic Technology, 15 (5). pp. 1157-1163.

Andutta, Fernando Pinheiro, de Miranda, Luiz Bruner, Schettini, Carlos Augusto Franca, Siegle, Eduardo, da Silva, Mario Pereira, Izumi, Vitor Massaki, and Chagas, Felipe Murai Temporal variations of temperature, salinity and circulation in the Peruipe river estuary (nova Vicosa, BA). Continental Shelf Research, 70. pp. 36-45.

Book Chapter

Wang, X.H., and Andutta, F.P. (2013) Sediment transport dynamics in ports, estuaries and other coastal environments. In: Manning, Andrew J., (ed.) Sediment Transport Processes and their Modelling Applications. InTech, Croatia, pp. 3-36.

Wolanski, Eric, Andutta, Fernando, and Delhez, Eric (2012) Estuarine hydrology. In: Bengtsson, Lars, Herschy, Reginald W., and Fairbridge, Rhodes W., (eds.) Encyclopedia of Lakes and Reservoirs. Encyclopedia of Earth Sciences Series . Springer-Verlag, pp. 238-249.

Stieglitz, Thomas (2011) Submarine groundwater discharge. In: Hopley, David, (ed.) Encyclopedia of Modern Coral Reefs: structure, form and process. Encyclopedia of Earth Sciences . Springer, Dordrecht, Netherlands, p. 1052.

Eakin, C.M., Lough, J.M., and Heron, Scott (2009) Climate variability and change: monitoring data and evidence for increased coral bleaching stress. In: van Oppen, Madeleine J.H., and Lough, Janice M., (eds.) Coral Bleaching: patterns, processes, causes and consequences. Ecological Studies, 205 . Springer, Berlin, Germany, pp. 41-67.

Donner, Simon D., Heron, Scott F., and Skirving, William (2009) Future scenarios: a review of modelling efforts to predict the future of coral reefs in an era of climate change. In: van Oppen, Madeleine J.H., and Lough, Janice M., (eds.) Coral Bleaching: Patterns, Processes Causes and Consequences. Ecological Studies, 205 . Springer, Berlin, Germany, pp. 159-173.

Walsh, John P., and Ridd, Peter V. (2009) Processes, sediments, and stratigraphy of the Fly River Delta. In: Bolton, B.R., (ed.) The Fly River, Papua New Guinea: environmental studies in an impacted tropical river system. Developments in Earth & Environmental Sciences 9 . Elsevier, Burlington, MA, USA, pp. 153-176.

Kingsford, M.J., and Wolanski, E. (2008) Oceanography. In: Hutchings, Pat, Kingsford, Mike, and Hoegh-Guldberg, Ove, (eds.) The Great Barrier Reef: biology, environment and management. CSIRO Publishing, Collingwood, VIC, Australia, pp. 28-39.

Skirving, William, Heron, Mal, and Heron, Scott (2006) The hydrodynamics of a bleaching event: implications for management and monitoring. In: Phinney, Jonathan T., Hoegh-Guldberg, 0ve, Kleypas, Joanie, Skirving, William, and Strong, Al, (eds.) Coral Reefs and Climate Change: Science and Management. American Geophysical Union, Washington DC, USA, pp. 145-161.

Report

Stieglitz, Thomas (2006) AIMS@JCU cruise report SHOALS. Project Report. AIMS@JCU, Townsville, Australia. (Unpublished)

Conference Item

Wyatt, Lucy R., Atwater, Dan, Mantovanelli, Allessandra, Prytz, Arnstein, and Rehder, Sven (2013) The Australian Coastal Ocean Radar Network data availability and quality. In: Proceedings of the International Radar Symposium (2), pp. 405-410. From: IRS 2013: International Radar Symposium, 9-21 June 2013, Dresden, Germany.

Wyatt, L.R., Atwater, D., Prytz, A., and Rehder, S. (2013) A comparison between SeaSonde and WERA HF radar current measurements. In: Proceedings of Oceans 2013 MTS/IEEE Bergen. From: Oceans 2013 MTS/IEEE Bergen, 10-13 June 2013, Bergen, Norway.

Heron, Mal, Wyatt, Lucy, Atwater, Daniel, and Prytz, Arnstein (2012) The Australian coastal ocean radar network: lessons learned in the establishment phase. In: OCEANS, 2012 - YEOSU, pp. 1-5. From: OCEANS, 2012 - YEOSU, 21-24 May 2012, Yeosu, Korea (South).

Heron, Mal, Mantovanelli, Allessandra, Massa, Diane Di, and Heron, Scott (2012) Coastal ocean radars applied to coral reef science and management. In: Proceedings of the 12th International Coral Reef Symposium, pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Heron, Scott F., Maynard, Jeffrey, Willis, Bette, Christensen, Tyler, Harvell, C Drew, Vargas-Angel, Bernardo, Beeden, Roger, Sziklay, Jamie, Aeby, Greta, Franklin, Eric C., Skirving, William, Eakin, C. Mark, Burgess, Tim, Li, Jianke, Liu, Gang, Lucas, Ethan, Rauenzahn, Jackqueline, and Strong, Al (2012) Developments in understanding relationships between environmental conditions and coral disease. In: Proceedings of the 12th International Coral Reef Symposium, pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Heron, Scott, Pressey, Robert L., Skirving, William J., Rauenzahn, Jacqueline L., Parker, Britt-Anne A., and Eakin, C. Mark (2012) Identifying oceanic thermal anomalies in the coral triangle region. In: Proceedings of the 12th International Coral Reef Symposium, pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Doshi, Amar, Pascoe, Sean, Thébaud, Olivier, Thomas, Colette R., Setiasih, Naneng, Hong, James Tan Chun, True, James, Schuttenberg, Heidi Z., and Heron, Scott F. (2012) Loss of economic value from coral bleaching in S.E. Asia. In: Proceedings of the 12th International Coral Reef Symposium, pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Mantovanelli, Allessandra, and Heron, Mal (2012) Radar-based tracking of pollutants/larvae in the Coral Sea. In: Proceedings of the 12th International Coral Reef Symposium, pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Wyatt, Lucy (2012) Use of HF radar for marine renewable applications. In: OCEANS, 2012 - YEOSU, pp. 1-5. From: OCEANS, 2012, 21-24 May 2012, Yeosu, Korea (South).

Jaffrés, Jasmine B.D., and Heron, Malcolm L. (2011) Wave climate in the Southern Great Barrier Reef, Australia: evaluation of an ocean HF radar system and WaveWatch3. In: Proccedings of OCEANS 2011, pp. 1-6. From: OCEANS 2011 MTS/IEEE Kona, 19-22 September 2011, Waikoloa, HI, USA.

Heron, Mal, Prytz, Arnstein, and Steinberg, Craig (2011) Application of VHF high resolution radar to evaluating circulation around a seawater intake facility. In: Proccedings of OCEANS 2011, pp. 1-5. From: OCEANS 2011 MTS/IEEE Kona, 19-22 September 2011, Waikoloa, HI, USA.

Gal, Y., Browne, M,, and Lane, C. (2011) Automatic estimation of nearshore wave height from video timestacks. In: Proceedings of 2011 International Conference on Digital Image Computing: techniques and applications, pp. 364-369. From: DICTA 2011 International Conference on Digital Image Computing: techniques and applications, 6-8 December 2011, Noosa, QLD, Australia.

Heron, Mal, Prytz, Arnstein, and Steinberg, Craig (2011) High Resolution Ocean Radar Observations in Ports and Harbours. In: Proceedings of Coasts and Ports 2011, pp. 1-6. From: Coasts and Ports 2011, 28 - 30 September 2011, Perth, WA, Australia.

Stieglitz, T.C., Hancock, G., Clarke, J., and Cook, P.G. (2011) Radioisotopes and coastal research in the Great Barrier Reef. In: Abstracts from 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, pp. 106-107. From: 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, 12-14 July 2011, Cairns, QLD, Australia.

Mantovanelli, A., Heron, M.L., Prytz, A., Steinberg, C.R., and Wisdom, E. (2011) Validation of radar-based Lagrangian trajectories against surface-drogued drifters in the coral sea, Australia. In: Proceedings of OCEANS 2011, pp. 1-4. From: OCEANS 2011 MTS/IEEE Kona, 19-22 September 2011, Waikoloa, HI, USA.

Jaffrés, Jasmine B.D., and Heron, Mal (2011) Wave Climate off the Perth Coast: evaluation of an ocean HF radar system and WaveWatch3. In: Proceedings of Coasts and Ports 2011, pp. 1-6. From: Coasts and Ports 2011, 28 - 30 September 2011, Perth, WA, Australia.

Heron, M.L., and Prytz, A. (2011) The data archive for the phased array HF radars in the Australian Coastal Ocean Radar Network. In: Proceedings of OCEANS 2011 IEEE Spain, pp. 1-4. From: OCEANS 2011 IEEE Spain, 6-9 June 2011, Santander, Spain.

Atwater, D.P., and Heron, M.L. (2011) A first approach to SeaSonde quality control. In: Proccedings of OCEANS 2011, pp. 1-5. From: OCEANS 2011 MTS/IEEE Kona, 19-22 September 2011, Waikoloa, HI, USA.

DiMassa, Diane D., Heron, Malcolm L., Mantovanelli, Allessandra, Heron, Scott F., and Steinberg, Craig (2010) Can vertical mixing from turbulent kinetic energy mitigate coral bleaching? An application of high frequency ocean radar. In: Proceedings of Oceans 2010 IEEE. From: Oceans 10 IEEE Sydney, 24-27 May 2010, Sydney, NSW, Australia.

Stieglitz, T.C., Holliday, D., Ridd, P.V., Cook, P.G., and Read, W.W. (2010) Geological controls and tidal forcing of submarine groundwater discharge from a confined aquifer, Elim Beach, northeast Australia. In: Abstracts from ASLO & NABS 2010 Summer Meeting, p. 1. From: ASLO & NABS: 2010 Summer Meeting, 6 - 11 June 2010, Santa Fe, NM, USA.

Atwater, D.P., and Heron, M.L. (2010) HF radar two-station baseline bisector comparisons of radial components. In: Proceedings of Oceans 2010 IEEE. From: Oceans 10 IEEE Sydney, 24-27 May 2010, Sydney, NSW, Australia.

Bainbridge, S.J., Steinberg, C.R., Heron, M.L., and Furnas, M.J. (2010) Integrating observation systems: an example from the Great Barrier Reef. In: Proceedings of Oceans 2010 IEEE. From: Oceans 10 IEEE Sydney, 24-27 May 2010, Sydney, NSW, Australia.

Stieglitz, Thomas, van Beek, Pieter, and Souhaut, Marc (2010) Multi-tracer reconnaissance of submarine groundwater discharge along the French Mediterranean coast. In: Abstracts from Radium and Radon Isotapes as Environmental Tracers, p. 20. From: Radium and Radon Conference 2010: Radium and Radon Isotopes as Environmental Tracers, 14 - 19 March 2010, Jerusalem, Israel.

Atwater, D.P., and Heron, M.L. (2010) Temporal error analysis for compact cross-loop direction-finding HF radar. In: Proceedings of Oceans 2010 MTS/IEEE Seattle Conference & Exhibition, pp. 1-6. From: Oceans 2010 MTS/IEEE Seattle, 20-23 September 2010, Seattle, WA, USA.

Jaffrés, Jasmine, Heron, Malcolm L., Middleditch, Andrew, Steinberg, Craig R., and Durrant, Tom H. (2010) Waves in the southern Great Barrier Reef. In: Proceedings of Oceans 2010 IEEE. From: Oceans 2010 Sydney, 24-27 May 2010, Sydney, NSW, Australia.

Heron, M.L., Mantovanelli, A., Steinberg, C., and King, B. (2010) What can HF radar contribute to the salvage of a grounded ship? In: Proceedings of Oceans 2010 MTS/IEEE Seattle Conference & Exhibition, pp. 1-4. From: Oceans 2010 MTS/IEEE Seattle, 20-23 September 2010, Seattle, WA, USA.

Heron, M.L., and Marrone, P. (2010) Wind direction manifestation on HF ocean radar echoes. In: Proceedings of Oceans 2010 IEEE. From: Oceans 10 IEEE Sydney, 24-27 May 2010, Sydney, NSW, Australia.

Mantovanelli, A., Heron, M.L., and Prytz, A. (2010) The use of HF radar surface currents for computing Lagrangian trajectories: benefits and issues. In: Proceedings of Oceans 2010 IEEE. From: Oceans 10 IEEE Sydney, 24-27 May 2010, Sydney, NSW, Australia.

Heron, M.L. (2009) The Australian coastal ocean radar network facility. In: Proceedings of the Canadian Conference on Electrical and Computer Engineering 2009, pp. 23-26. From: Canadian Conference on Electrical and Computer Engineering 2009, 3-6 May 2009, St John's, NFLD, Canada.

Heron, M.L., and Prytz, A. (2009) HF radar role in an integrated ocean observing system. In: Proceedings of the Oceans 2009 - Europe Conference , pp. 1-4. From: Oceans 2009 - Europe Conference , 11-14 May, 2009, Bremen, Germany.

Wyatt, Lucy R., and Green, J. Jim (2009) Measuring high and low waves with HF radar. In: OCEANS 2009 - Europe, pp. 1029-1033. From: Oceans 2009 - Europe Conference , 11-14 May 2009, Bremen, Germany.

Heron, M.L., and Prytz, A. (2008) The Australian Coastal Ocean Radar Network: data archiving protocols. In: Proceedings of the Western Pacific Geophysics Meeting (89). From: 2008 Western Pacific Geophysics Meeting, 29 July - 1 August 2008, Cairns, QLD, Australia.

Wyatt, Lucy R., Green, J. Jim, and Middleditch, Andrew (2008) Directional spectra comparisons between HF radar and a wave model. In: Proceedings of the IEEE/OES/CMTC 9th Working Conference on Current Measurement Technology, pp. 211-216. From: IEEE/OES/CMTC 9th Working Conference on Current Measurement Technology, 17-19 March 2008, Charlston, SC, USA.

Wyatt, L.R., Green, J.J., Middleditch, A., and Waters, J.C. (2008) HF radar directional spectra validation with buoy and model data. In: Proceedings of the 27th International Conference on Offshore Mechanics and Arctic Engineering (4), pp. 869-877. From: ASME 2008: 27th International Conference on Offshore Mechanics and Arctic Engineering, 15-20 June 2008, Estoril, Portugal.

Cetina-Heredia, P., and Michael, H. (2008) Modelling physical processes driving larval transport in reef systems. In: Proceedings of the Western Pacific Geophysics Meeting (89). From: 2008 Western Pacific Geophysics Meeting, 29 July - 1 August 2008, Cairns, QLD, Australia.

Pinheiro Andutta, Fernando, de Miranda, Luiz Bruner, de Castro, Belmiro Mendes, Fontes, Roberto Fioravanti Carelli, and Ramos e Silva, Carlos Augusto (2006) Numerical simulation of the hydrodynamic in the Curimataú estuary, RN Brazil. In: Proceedings of the III Simposio Brasileiro de Oceanografia, pp. 545-558. From: III Simposio Brasileiro de Oceanografia, 2008, Sao Paulo, Brazil.

Bathgate, Jonathan S., and Heron, Mal (2005) Swell waves monitored by HF ocean surface radar at Tweed Heads and Bass Strait. In: Proceedings of the 17th Australasian Coastal and Ocean Engineering Conference Conference and the 10th Australasian Port and Harbour Conference, pp. 191-196. From: 2005 Coasts and Ports Australasian Conference, 20-23 September 2005, Adelaide, SA, Australia.

Heron, Mal L. (2005) The role of HF ocean surface radar in Australia as a long-term coastal ocean monitoring facility. In: Proceedings of the 17th Australasian Coastal and Ocean Engineering Conference Conference and the 10th Australasian Port and Harbour Conference, pp. 185-190. From: 2005 Coasts and Ports Australasian Conference, 20-23 September 2005, Adelaide, SA, Australia.

Book

Mazda, Yoshihiro, Wolanski, Eric, and Ridd, Peter (2007) The Role of Physical Processes in Mangrove Environments: manual for the preservation and utilization of mangrove ecosystems. Terrapub, Tokyo, Japan.

Thesis

Andutta, Fernando Pinheiro (2012) Water dynamics and transport timescales of coastal waters and estuaries. PhD thesis, James Cook University.

Jaffrés, Jasmine Bernadette Denise (2011) The oceanographic and geochemical effects of mixed layer depth variability and increasing anthropogenic CO₂ on the inorganic carbon system of the Coral Sea. PhD thesis, James Cook University.

Choukroun, Séverine (2010) The surface circulation of the Coral Sea and Great Barrier Reef. PhD thesis, James Cook University.

Hoeke, Ron Karl (2010) An investigation of wave-dominated coral reef hydrodynamics. PhD thesis, James Cook University.

Page, Geoff (2007) Mass transport evaluation using consolidated VHF Radar and Acoustic Doppler Current Profiler data. Masters (Research) thesis, James Cook University.

Mantovanelli, Alessandra (2005) A new approach for measuring in situ the concentration and settling velocity of suspended cohesive sediment. PhD thesis, James Cook University.

Bathgate, Jonathan Stacy (2005) Extensions to the COSRAD HF ocean surface radar : extraction of swell wave parameters. PhD thesis, James Cook University.

Puotinen, Marjetta Lee (2004) Tropical cyclone impacts on coral reef communities: modelling the disturbance regime in the Great Barrier Reef region, 1969-2003. PhD thesis, James Cook University.

This list was generated on Thu Apr 24 13:56:23 2014 EST.