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Bhattarai, Surya P., Su, Ninghu, and Midmore, David, J. (2005) Oxygation unlocks yield potentials of crops in oxygen-limited soil environments. In: Sparks, Donald L., (ed.) Advances in Agronomy. Elsevier, pp. 313-377.
Butler, James R.A., Wong, Grace Y., Metcalfe, Daniel J., Honzák, Miroslav, Pert, Petina L., Rao, Nalini, van Grieken, Martijn E., Lawson, Tina, Bruce, Caroline, Kroon, Frederieke J., and Brodie, Jon E. An analysis of trade-offs between multiple ecosystem services and stakeholders linked to land use and water quality management in the Great Barrier Reef, Australia. Agriculture, Ecosystems and Environment. (In Press)
Craig, James R., and Read, W. Wayne (2010) The future of analytical solution methods for groundwater flow and transport simulation. In: Proceedings of the XVIII International Conference on Water Resources, pp. 1-8. From: CMWR 2010 XVIII International Conference on Computational Methods in Water Resources, 21-24 June 2010, Barcelona, Spain.
Cox, Kendrick, Gardiner, Christopher, McDonald, Cam, Hilder, Terry, Hall, Trevor, and Clem, Bob (2005) The pre-emptive control of weedy pasture legumes. In: Proceedings of the 8th Queensland Weed Symposium. From: Proceedings of the 8th Queensland Weed Symposium, 19-22 June 2005, Townsville, QLD, Australia.
Davis, Aaron M., Lewis, Stephen E., Bainbridge, Zoë T., Glendenning, Lionel, Turner, Ryan D.R., and Brodie, Jon E. (2012) Dynamics of herbicide transport and partitioning under event flow conditions in the lower Burdekin region, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 182-193.
Devlin, Michelle, and Lewis, Stephen (2011) Advancing Our Understanding of the Source, Transport and Impacts of Pesticides on the Great Barrier Reef and in Associated Ecosystems: a review of MTSRF research outputs, 2006-2010. Report. Reef and Rainforest Research Centre, Cairns, QLD.
Devlin, Michelle, Bricker, Suzanne, and Painting, Suzanne (2011) Comparison of five methods for assessing impacts of nutrient enrichment using estuarine case studies. Biogeochemistry, 106 (2). pp. 177-205.
Davis, A.M., Thorburn, P.J., Lewis, S.E., Bainbridge, Z.T., Attard, S.J., Milla, R., and Brodie, J.E. Environmental impacts of irrigated sugarcane production: Herbicide run-off dynamics from farms and associated drainage systems. Agriculture, Ecosystems and Environment. (In Press)
Johnson, Johanna, Brando, Vittorio, Devlin, Michelle, McKenzie, Len, Morris, Sheridan, Schaffelke, Britta, Thompson, Angus, Waterhouse, Jane, and Waycott, M (2011) Reef Rescue Marine Monitoring Program: 2009/2010 synthesis report. Report. Reef and Rainforest Research Centre, Cairns, QLD.
Kennedy, Karen, Schroeder, Thomas, Shaw, Melanie, Haynes, David, Lewis, Stephen, Bentley, Christie, Paxman, Chris, Carter, Steve, Brando, Vittorio E., Bartkow, Michael, Hearn, Laurence, and Mueller, Jochen F. (2012) Long term monitoring of photosystem II herbicides: correlation with remotely sensed freshwater extent to monitor changes in the quality of water entering the Great Barrier Reef, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 292-305.
Kroon, Frederieke J., Kuhnert, Petra M., Henderson, Brent L., Wilkinson, Scott N., Kinsey-Henderson, Anne, Abbot, Brett, Brodie, Jon E., and Turner, Ryan D.R. (2012) River loads of suspended solids, nitrogen, phosphorus and herbicides delivered to the Great Barrier Reef lagoon. Marine Pollution Bulletin, 65 (4-9). pp. 167-181.
Lewis, Stephen E., Schaffelke, Britta, Shaw, Melanie, Bainbridge, Zoë T., Rohde, Ken W., Kennedy, Karen, Davis, Aaron M., Masters, Bronwyn L., Devlin, Michelle J., Mueller, Jochen F., and Brodie, Jon E. (2012) Assessing the additive risks of PSII herbicide exposure to the Great Barrier Reef. Marine Pollution Bulletin, 65 (4-9). pp. 280-291.
Lewis, S.E., Brodie, J.E., McCulloch, M.T., Mallella, J., Jupiter, S.D., Williams, H. Stuart, Lough, J.M., and Matson, E.G. (2012) An assessment of an environmental gradient using coral geochemical records, Whitsunday Islands, Great Barrier Reef, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 306-319.
Lewis, S.E., Smith, R., Brodie, J.E., Bainbridge, Z.T., Davis, A.M., and Turner, R. (2011) Using monitoring data to model herbicides exported to the Great Barrier Reef, Australia. In: Proceedings of 19th International Congress on Modelling and Simulation, pp. 2051-2056. From: MODSIM 2011 19th International Congress on Modelling and Simulation, 12–16 December 2011, Perth, WA, Australia.
Mitchell, David Clive (2005) Understanding the surface hydrology of low lying sugarcane fields for a basis of optimised surface drainage criteria. PhD thesis, James Cook University.
Navaratna, Dimuth, Elliman, Jennifer, Cooper, Alanna, Shu, Li, Baskaran, Kanagaratnam, and Jegatheesan, Veeriah (2012) Impact of herbicide Ametryn on microbial communities in mixed liquor of a membrane bioreactor (MBR). Bioresource Technology, 113. pp. 181-190.
Nelson, P.N., Whitehead, P.W., and Link, C.A. (2010) Buried lava flows crossing the Great Divide in north Queensland: discovery using magnetic methods, and implications for hydrology. Australian Journal of Earth Sciences, 57 (3). pp. 279-289.
Nelson, Paul N., Cotsaris, Evangelo, and Oades, J. Malcolm (1996) Nitrogen, phosphorus and organic carbon in streams draining two grazed catchments. Journal of Environmental Quality, 25 (6). pp. 1221-1229.
Nelson, P.N., Cotsaris, E., Oades, J.M., and Bursill, D.B. (1990) Influence of soil clay content on dissolved organic matter in stream water. Marine and Freshwater Research, 41 (6). pp. 761-774.
O'Reagain, Peter, Bainbridge, Zoe, and Brodie, Jon (2008) Wambiana Grazing Trial: water quality update to Burdekin Dry Tropics NRM. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.
Pearson, Richard G., and Stork, Nigel (2008) Catchment to reef: water quality and ecosystem health in tropical streams. In: Stork, Nigel E., and Turton, Stephen M., (eds.) Living in a Dynamic Tropical Forest Landscape. Blackwell Publishing, Carlton, VIC, Australia, pp. 557-576.
Pearson, Benjamin Alastair (2006) Rates and controls of streambank retreat and erosion in three tropical streams in North-eastern Queensland. PhD thesis, James Cook University.
Rasiah, V., Armour, J.D., and Nelson, P.N. (2011) Identifying the major variables controlling transport of water and analytes from an alluvial aquifer to streams. Journal of Environmental Hydrology, 19. pp. 1-15.
Su, Ninghu (2012) Distributed-order infiltration, absorption and water exchange in mobile and immobile zones of swelling soils. Journal of Hydrology, 468-469 (10). pp. 1-10.
Su, Ninghu, Watt, Jim P. C., Vincent, Keith W., Close, Murray E., and Mao, Renzhao (2004) Analysis of turbulent flow patterns of soil water under field conditions using Burgers equation and porous suction-cup samplers. Australian Journal of Soil Research, 42 (1). pp. 9-16.
Stoeckl, N., and Inman-Bamber, N.G. (2003) The value of irrigation water with uncertain future rain: a simulation case study of sugarcane irrigation in northern Australia. Water Resources Research, 39 (10). pp. 1302-1307.
Tweed, Sarah, Grace, Michael, LeBlanc, Marc, Cartwright, Ian, and Smithyman, Donna (2011) The individual response of saline lakes to a severe drought. Science of the Total Environment, 409 (19). pp. 3919-3933.
Verrall, D.P., and Read, W.W. (2012) Predicting diffusion in aquifers beneath saline ponds. Journal of Hydrology, 475. pp. 150-157.
Versace, Vince Lawrence, Ierodiaconou, Daniel, Stagnitti, Frank, Hamilton, Andrew John, Walter, M. Todd, and Leblanc, Marc (2007) The relationship between native vegetation and in-stream salinity: an Australian case study. In: Schumann, Andreas, and Pahlow, Markus, (eds.) Reducing the Vulnerability of Societies to Water Related Risks at the Basin Scale. IAHS Press, pp. 1-5.
Waterhouse, J., Brodie, J., Lewis, S., and Mitchell, A. (2012) Quantifying the sources of pollutants in the Great Barrier Reef catchments and the relative risk to reef ecosystems. Marine Pollution Bulletin, 65 (4-9). pp. 394-406.
Waterhouse, Jane, and Devlin, Michelle (2011) Managing Water Quality on the Great Barrier Reef: an overview of MTSRF research outputs, 2006-2010. Report. Reef and Rainforest Research Centre, Cairns.
Waterhouse, Jane, and Brodie, Jon (2011) Identification of Priority Pollutants and Priority Areas in the Great Barrier Reef catchments. Report. Reef and Rainforest Research Centre, Cairns, QLD.
Whitehead, P.W., and Nelson, P.N. (2008) Influence of basalt flows and alluvial deposition on surface and groundwater hydrology on the Great Divide, North Queensland. In: Papers from 2008 Western Pacific Geophysics Meeting. From: American Geophysical Union, Western Pacific Meeting, 29 July – 1 August 2008, Cairns, QLD, Australia.