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Number of items at this level: 314.

A

Abrantes, Kátya G., Barnett, Adam, Baker, Ronald, and Sheaves, Marcus (2015) Habitat-specific food webs and trophic interactions supporting coastal-dependent fishery species: an Australian case study. Reviews in Fish Biology and Fisheries, 25 (2). pp. 337-363.

Andutta, Fernando P., Ridd, Peter V., Deleersnijder, Eric, and Prandle, David (2014) Contaminant exchange rates in estuaries: new formulae accounting for advection and dispersion. Progress in Oceanography, 120. pp. 139-153.

Amies, R.L., Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: monthly report February 2013. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

Andutta, Fernando P. , Ridd, Peter V., and Wolanski, E. (2013) The age and the flushing time of the Great Barrier Reef Waters. Continental Shelf Research, 53. pp. 11-19.

Adams, Vanessa Marie (2011) Incorporating socio-economic considerations into systematic conservation planning. PhD thesis, James Cook University.

Abrantes, Kátya, and Sheaves, Marcus (2009) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Marine and Freshwater Research, 60 (9). pp. 949-959.

Abrantes, Kátya, and Sheaves, Marcus (2009) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuarine, Coastal and Shelf Science, 82 (4). pp. 597-607.

Abrantes, Katya, and Sheaves, Marcus (2008) Incorporation of terrestrial wetland material into aquatic food webs in a tropical estuarine wetland. Estuarine, Coastal and Shelf Science , 80 (3). pp. 401-412.

Andutta, Fernando Pinheiro, dos Santos, Michael R.M., De Miranda, Luiz Bruner, Ancona, Cintia M., Saldanha-Corrêa, Flávia M.P., and Gianesella, Sônia M.F. (2006) Monthly variations of physical and chemical properties observed in Santos Bay and Santos Estuarine channel. In: Proceedings of the Environmental and Health World Congress, pp. 80-84. From: EHWC 2006: Environmental and Health World Congress, 16-19 July 2006, Santos, Brazil.

B

Baird, Mark E., Adams, Matthew P., Babcock, Russell C., Oubelkheir, Kadija, Mongin, Mathieu, Wild-Allen, Karen A., Skerratt, Jennifer, Robson, Barbara J., Petrou, Katherina, Ralph, Peter J., O’Brien, Katherine R., Carter, Alex B., Jarvis, Jessie C., and Rasheed, Michael A. (2016) A biophysical representation of seagrass growth for application in a complex shallow-water biogeochemical model. Ecological Modelling, 325. pp. 13-27.

Baena, Martha L., Escobar, Federico, Halffter, Gonzalo, and García–Chávez, Juan H. (2015) Distribution and feeding behavior of Omorgus suberosus (Coleoptera: Trogidae) in Lepidochelys olivacea turtle nests. PLoS ONE, 10 (9).

Baker, Ronald, Sheaves, Marcus, and Johnston, Ross (2015) Geographic variation in mangrove flooding and accessibility for fishes and nektonic crustaceans. Hydrobiologia, 762 (1). pp. 1-14.

Brodie, Jon, Lewis, Stephen, Davis, Aaron, Bainbridge, Zoe, O'Brien, Dominique, Waterhouse, Jane, Devlin, Michelle, and Thomas, Colette R. (2015) Management of agriculture to preserve environmental values of the Great Barrier Reef, Australia. In: Chicharo, Luís, Müller, Felix, and Fohrer, Nicola, (eds.) Ecosystems Services and River Basin Ecohydrology. Springer, Dordrecht, Netherlands, pp. 275-292.

Bell, Justine, Saunders, Megan I., Leon, Javier X., Mills, Morena, Kythreotis, Andrew, Phinn, Stuart, Mumby, Peter, Lovelock, Catherine E., Hoegh-Guldberg, Ove, and Morrison, T.H. (2014) Maps, laws and planning policy: working with biophysical and spatial uncertainty in the case of sea level rise. Environmental Science & Policy, 44. pp. 247-257.

Bryant, C., Davies, J.D., Jarvis, J.C., Tol, S., and Rasheed, M. (2014) Seagrasses in Port Curtis & Rodds Bay 2013: annual long term monitoring, biannual western basin surveys & updated baseline survey. Report. TropWATER, James Cook University, Cairns.

Brodie, Jon (2014) Dredging the Great Barrier Reef: use and misuse of science. Estuarine, Coastal and Shelf Science , 142. pp. 1-3.

Bryant, C., Davies, J., Sankey, T., Jarvis, J., and Rasheed, M. (2014) Long term seagrass monitoring in the Port Curtis western basin: quarterly seagrass assessments & permanent transect monitoring progress report 2009 to 2013. Report. TropWATER, James Cook University, Cairns.

Browne, N.K., Smithers, S.G., and Perry, C.T. (2013) Carbonate and terrigenous sediment budgets for two inshore turbid reefs on the central Great Barrier Reef. Marine Geology, 346. pp. 101-123.

Brandl, S.J., and Bellwood, D.R. (2013) Morphology, sociality, and ecology: can morphology predict pairing behavior in coral reef fishes? Coral Reefs, 32 (3). pp. 835-846.

Bell, Ian (2013) Algivory in hawksbill turtles: Eretmochelys imbricata food selection within a foraging area on the Northern Great Barrier Reef. Marine Ecology, 34 (1). pp. 43-55.

Boyden, James, Joyce, Karen E., Boggs, Guy, and Wurm, Penny (2013) Object-based mapping of native vegetation and para grass (Urochloa mutica) on a monsoonal wetland of Kakadu NP using a Landsat 5 TM Dry-season time series. Journal of Spatial Science, 58 (1). pp. 53-77.

Berg Soto, Alvaro (2012) Evaluation of different management approaches to reduce the bycatch of Indo-Pacific humpback dolphins (Sousa chinensis) and Australian snubfin dolphins (Orcaella heinsohni) in Queensland, Australia. PhD thesis, James Cook University.

Bellwood, David R., Renema, Willem, and Rosen, Brian R. (2012) Biodiversity hotspots, evolution and coral reef biogeography: a review. In: Gower, David J., Johnson, Kenneth G., Richardson, James E., Rosen, Brian R., Rüber, Lukas, and Williams, Suzanne T., (eds.) Biotic Evolution and Environmental Change in Southeast Asia. The Systematics Association Special Volume Series, 82 . Cambridge University Press, New York, USA, pp. 216-245.

Browne, N.K., Smithers, S.G., and Perry, C.T. (2012) Coral reefs of the turbid inner-shelf of the Great Barrier Reef, Australia: an environmental and geomorphic perspective on their occurrence, composition and growth. Earth-Science Reviews, 115 (1-2). pp. 1-20.

Botte, Emmanuelle (2011) Effects of pesticide exposure and thermal stress in a model tropical reef fish, the damselfish Acanthochromis polyacanthus. PhD thesis, James Cook University.

Brodie, J.E., Devlin, M., Haynes, D., and Waterhouse, J. (2011) Assessment of the eutrophication status of the Great Barrier Reef lagoon (Australia). Biogeochemistry, 106 (2). pp. 281-302.

Balaguer, P., Diedrich, A., Sarda, R., Fuster, M., Cañellas, B., and Tintoré, J. (2011) Spatial analysis of recreational boating as a first key step for marine spatial planning in Mallorca (Balearic Islands, Spain). Ocean & Coastal Management, 54 (3). pp. 241-249.

Bannister, R.J., Battershill, C.N., and de Nys, R. (2010) Demographic variability and long-term change in a coral reef sponge along a cross-shelf gradient of the Great Barrier Reef. Marine and Freshwater Research, 61 (4). pp. 389-396.

Brodie, Jon, Schroeder, Thomas, Rohde, Ken, Faithful, John, Masters, Bronwyn, Dekker, Arnold, Brando, Vittorio, and Maughan, Mirjam (2010) Dispersal of suspended sediments and nutrients in the Great Barrier Reef lagoon during river-discharge events: conclusions from satellite remote sensing and concurrent flood-plume sampling. Marine and Freshwater Research, 61 (6). pp. 651-664.

Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.

Boyle, M.C., FitzSimmons, N.N., Limpus, C.J., Kelez, S., Velez-Zuazo, X., and Waycott, M. (2009) Evidence for transoceanic migrations by loggerhead sea turtles in the southern Pacific Ocean. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1664). pp. 1993-1999.

Brodie, Jon, Lewis, Stephen, Bainbridge, Zoe, Mitchell, Alan, Waterhouse, Jane, and Kroon, Frederieke (2009) Target setting for pollutant discharge management of rivers in the Great Barrier Reef catchment area. Marine and Freshwater Research, 60 (11). pp. 1141-1149.

Berger, Uta, Rivera-Monroy, Victor H., Doyle, Thomas W., Dahdouh-Guebas, Farid, Duke, Norman C., Fontalvo-Herazo, Martha L., Hildenbrandt, Hanno, Koedam, Nico, Mehlig, Ulf, Piou, Cyril, and Twilley, Robert R. (2008) Advances and limitations of individual-based models to analyze and predict dynamics of mangrove forests: a review. Aquatic Botany, 89 (2). pp. 260-274.

Bouillon, Steven, Borges, Alberto V., Castañeda-Moya, Edward, Diele, Karen, Dittmar, Thorsten, Duke, Norman C., Kristensen, Erik, Lee, Shing Y., Marchand, Cyril, Middelburg, Jack J., Rivera-Monroy, Victor H., Smith, Thomas, and Twilley, Robert R. (2008) Mangrove production and carbon sinks: a revision of global budget estimates. Global Biogeochemical Cycles, 22 (2).

Balaguer, Pau, Sarda, Rafael, Ruiz, Maurici, Diedrich, Amy, Vizoso, Guillermo, and Tintore, Joaquin (2008) A proposal for boundary delimitation for integrated coastal zone management initiatives. Ocean & Coastal Management, 51 (12). pp. 806-814.

Butler, Barry, and Burrows, Damien W. (2007) Dissolved Oxygen Guidelines for Freshwater Habitats of Northern Australia. Report. Australian Centre for Tropical Freshwater Research, Townsville, QLD, Australia.

Bishop, Melanie J., Kelaher, Brendan P., Smith, Marcus P. Lincoln, York, Paul H., and Booth, David J. (2006) Ratio-dependent response of a temperate Australian estuarine system to sustained nitrogen loading. Oecologia, 149 (4). pp. 701-708.

Bell, Alicia M., and Duke, Norman C. (2005) Effects of Photosystem II-inhibiting herbicides on mangroves: preliminary toxicology trials. Marine Pollution Bulletin, 51 (1-4). pp. 297-307.

Ban, Natalie, and Coomes, Oliver T. (2004) Home gardens in Amazonian Peru: diversity and exchange of planting material. Geographical Review, 94 (3). pp. 348-367.

C

Collier, C.J., Adams, M.P., Langlois, L., Waycott, M., O'Brien, K.R., Maxwell, P.S., and McKenzie, L. (2016) Thresholds for morphological response to light reduction for four tropical seagrass species. Ecological Indicators, 67. pp. 358-366.

Connolly, Rod M., and Waltham, Nathan J. (2015) Spatial analysis of carbon isotopes reveals seagrass contribution to fishery food web. Ecosphere, 6 (9). pp. 1-12.

Caronni, Sarah, Bresciani, Alessia, Delaria, Maria Anna, Meloni, Federico, Navone, Augusto, Panzalis, Pieraugusto, Heimann, Kirsten, and Ceccherelli, Giulia (2015) Ecology of the benthic mucilage-forming microalga Chrysophaeum taylorii in the W Mediterranean Sea: substratum and depth preferences. Estuarine, Coastal and Shelf Science , 161. pp. 38-45.

Carter, A.B., Davies, J.D., Bryant, C.V., Jarvis, J.C., McKenna, S.A., and Rasheed, M.A. (2015) Seagrasses in Port Curtis and Rodds Bay 2014: annual long-term monitoring, biannual western basin, and updated baseline survey. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Bryant, Catherine, Jarvis, Jessie, York, Paul, and Rasheed, Michael (2015) Developing thresholds and indicators of seagrass meadow condition using long-term monitoring data. In: Abstracts from the 52nd Australian Marine Science Association Annual Conference, p. 90. From: AMSA 2015: 52nd Australian Marine Science Association Annual Conference, 5-9 July 2015, Geelong, VIC, Australia.

Cinner, Joshua E., and Kittinger, John N. (2015) Linkages between social systems and coral reefs. In: Mora, Camilo, (ed.) Ecology of Fishes on Coral Reefs. Cambridge University Press, Cambridge, UK, pp. 215-220.

Carter, Alex, Taylor, Helen, and Rasheed, Michael (2014) Torres Strait mapping: seagrass consolidation: 2002-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Taylor, H.A., McKenna, S.A., York, P.Y., and Rasheed, M.A. (2014) The effects of climate on seagrasses in the Torres Strait: 2011-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Taylor, Helen, and Rasheed, Michael (2014) Torres Strait dugong sanctuary: deepwater seagrass monitoring 2010-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2014) Long-term seagrass monitoring in the Port of Thursday Island: March 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, and Rasheed, Michael (2014) Critical marine habitats in high risk areas, South Warden Reef to Howick Group region: 2013 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2013) Port of Weipa long‐term seagrass monitoring: August 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Cinner, Joshua (2013) Conservation focus: human dimensions of coral reefs. Conservation Biology, 27 (3). pp. 441-442.

Carter, Alex, Taylor, Helen, McKenna, Skye, and Rasheed, Michael (2013) Critical marine habitats in high risk areas, Torres Strait: Seo Reef to Kai-Wareg Reef: 2013 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, and Rasheed, Michael (2013) Critical marine habitats in high risk areas: Bathurst Bay region: 2012 atlas. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Carter, Alex, Chartrand, Katie, and Rasheed, Michael (2012) Critical marine habitats in high risk areas: Princess Charlotte Bay region: 2011 atlas. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Chipchase, T., and Awal, S. (2012) Investigation into the suitability of inland ground saline water for the growth of marine microalgae for industrial purposes. International Journal on Algae, 14 (1). pp. 79-92.

Collier, C.J., Waycott, M., and McKenzie, L.J. (2012) Light thresholds derived from seagrass loss in the coastal zone of the northern Great Barrier Reef, Australia. Ecological Indicators, 23. pp. 211-219.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2012) Port of Karumba long-term seagrass monitoring: November 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, A.B., McKenna, S.A., and Rasheed, M.A. (2012) Port of Weipa long-term seagrass monitoring: 2000-2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, Alex, Mapstone, Bruce, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2012) Reproductive benefits of no-take reserves vary atitudinally for Plectropomus leopardus. In: Abstracts from the 12th International Coral Reef Symposium, pp. 259-260. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Collier, Catherine J., Waycott, Michelle, and Ospina, Ana Giraldo (2012) Responses of four Indo-West Pacific seagrass species to shading. Marine Pollution Bulletin, 65 (4-9). pp. 342-354.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Carter, A., McKenna, S.A., and Rasheed, M.A. (2011) Seagrass, algae and macro-invertebrate survey for proposed channel extension in the Port of Weipa. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Carter, Alex, Carton, Guy, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2011) Significant variation in spawning frequency of common coral trout, Plectropomus leopardus, on the Great Barrier Reef. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association, p. 35. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Chen, Zhongyuan, Yanagi, Tetsuo, and Wolanski, Eric (2010) EMECS8 – harmonizing catchment and estuary. Estuarine, Coastal and Shelf Science, 86 (3). v-v.

Chartrand, K.M., McKenna, S.A., Petrou, K., Jimenez-Denness, I.M., Franklin, J., Sankey, T.L., Hedge, S.A., Rasheed, M.A., and Ralph, P.J. (2010) Port Curtis benthic primary producer habitat assessment and health studies update: interim report December 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Cooper, Timothy F., and Ulstrup, Karin E. (2009) Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient. Estuarine, Coastal and Shelf Science , 83 (2). pp. 186-196.

Carter, Alexandra, Mapstone, Bruce, Russ, Garry, Tobin, Andrew, and Williams, Ashley (2009) Regional variation in the benefit of no-take marine reserves on reproductive output of the common coral trout, Plectropomus leopardus. In: Abstracts from the Australian National Network in Marine Science Inaugural Conference. From: ANNIMS 2009: Australian National Network in Marine Science Inaugural Conference, 1-2 December 2009, Hobart, TAS, Australia.

Coles, Robert, McKenzie, Len, Rasheed, Michael, Mellors, Jane, Taylor, Helen, Dew, Kara, McKenna, Skye, Sankey, Tonia, Carter, Alexandra, and Grech, Alana (2007) Status and trends of seagrass habitats in the Great Barrier Reef World Heritage Area. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Carter, Alex B., Sheppard, James K., Coles, Robert G., and McKenzie, Len J. (2007) Sub-tidal seagrasses of the Torres Strait: spatial patterns and nutritional value for marine herbivores. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Cooper, Michelle, Faithful, John W., and Shields, Graham (2005) Sediment dynamics of a large tropical river system: the Burdekin River and Lake Dalrymple, Australia. In: Proceedings of 10th International Symposium on the interactions between sediments and water, p. 198. From: 10th International Symposium on the interactions between sediments and water, 28 August - 2 September 2005, Bled, Slovenia.

Calvert, Gregor Alan (2001) The effects of cattle grazing on vegetation diversity and structural characteristics in the semi-arid rangelands of North Queensland. PhD thesis, James Cook University.

Cavanagh, J.E., Burns, K.A., Brunskill, G.J., Ryan, D.A.J., and Ahokas, J.T. (2000) Induction of hepatic cytochrome P-450 1A in Pikey Bream (Acanthopagrus berda) collected from agricultural and urban catchments in far north Queensland. Marine Pollution Bulletin, 41 (7-12). pp. 377-384.

Cavanagh, J.E., Burns, K.A., Brunskill, G.J., and Coventry, R.J. (1999) Organochlorine pesticide residues in soils and sediments of the Herbert and Burdekin River regions: implications for contamination of the Great Barrier Reef. Marine Pollution Bulletin, 39 (1-12). pp. 367-375.

D

Duke, Norman C. (2016) Oil spill impacts on mangroves: recommendations for operational planning and action based on a global review. Marine Pollution Bulletin, 109 (2). pp. 700-715.

Dafforn, Katherine A., Mayer-Pinto, Mariana, Morris, Rebecca L., and Waltham, Nathan J. (2015) Application of management tools to integrate ecological principles with the design of marine infrastructure. Journal of Environmental Management, 158. pp. 61-73.

Devlin, Michelle J., Petus, Caroline, Da Silva, Eduardo, Tracey, Dieter, Wolff, Nicholas, Brodie, Jon, Waterhouse, Jane, and Martin, Katherine (2015) Improvements to water quality monitoring through the inclusion of ocean colour products correlated with in-situ water quality gradients for the Great Barrier Reef. In: Posters from the International Ocean Colour Science meeting. From: IOCS 2015: Second International Ocean Colour Science Meeting, 15-18 June 2015, San Fransisco, CA, USA.

Davies, Jaclyn, Tol, Samantha, and Rasheed, Michael (2015) Port of Townsville annual monitoring and baseline survey: October 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Duke, Norman C., and Schmitt, Klaus (2015) Mangroves: unusual forests at the seas edge. In: Pancel, Laslo, and Köhl, Michael, (eds.) Tropical Forestry Handbook. Springer, Berlin, Germany, pp. 1-24.

Davies, J.N., McKenna, S.A., Jarvis, J.C., Carter, A.B., and Rasheed, M.A. (2014) Port of Townsville annual monitoring and baseline survey: October 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Dunn, Ryan J.K., Waltham, Nathan J., Benfer, Nathan P., King, Brian A., Lemckert, Charles J., and Zigic, Sasha (2014) Gold Coast Broadwater: southern Moreton Bay, Southeast Queensland (Australia). In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 93-110.

Davis, Aaron M., Lewis, Stephen E., O'Brien, Dominique S., Bainbridge, Zoë T., Bentley, Christie, Mueller, Jochen F., and Brodie, Jon E. (2014) Water resource development and high value coastal wetlands on the lower Burdekin floodplain, Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 223-246.

Davis, A.M., Thorburn, P.J., Lewis, S.E., Bainbridge, Z.T., Attard, S.J., Milla, R., and Brodie, J.E. (2013) Environmental impacts of irrigated sugarcane production: Herbicide run-off dynamics from farms and associated drainage systems. Agriculture, Ecosystems and Environment, 180. pp. 123-135.

Devlin, Michelle J., da Silva, Eduardo Teixeira, Petus, Caroline, Wenger, Amelia, Zeh, Daniel, Tracey, Dieter, Álvarez-Romero, Jorge G., and Brodie, Jon (2013) Combining in-situ water quality and remotely sensed data across spatial and temporal scales to measure variability in wet season chlorophyll-a: Great Barrier Reef lagoon (Queensland, Australia). Ecological Processes, 2. pp. 1-22.

Diedrich, Amy, Terrados, Jorge, Arroyo, Nina Larissa, and Balaguer, Pablo (2013) Modeling the influence of attitudes and beliefs on recreational boaters' use of buoys in the Balearic Islands. Ocean & Coastal Management, 78. pp. 112-120.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Port Curtis and Rodds Bay seagrass monitoring program: biannual western sasin & annual long term monitoring: November 2012. Report. TropWATER, James Cook University, Cairns.

Davies, Jaclyn, McKenna, Skye, and Rasheed, Michael (2013) Port of Townsville long-term seagrass monitoring: September 2012. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

DeBose, J.L., Nuttall, M.F., Hickerson, E.L., and Schmahl, G.P. (2013) A high-latitude coral community with an uncertain future: Stetson Bank, northwestern Gulf of Mexico. Coral Reefs, 32 (1). pp. 225-267.

Davies, J.D., McCormack, C.V., and Rasheed, M.A. (2013) Gladstone Permanent Transect Seagrass Monitoring: January 2013 update report. Report. Centre for Tropical Water and Aquatic Ecosystem Research, James Cook University, Cairns, QLD, Australia.

Dunn, Ryan J.K., Welsh, David T., Jordan, Mark A., Waltham, Nathan J., Lemckert, Charles J., and Teasdale, Peter R. (2012) Benthic metabolism and nitrogen dynamics in a sub-tropical coastal lagoon: microphytobenthos stimulate nitrification and nitrate reduction through photosynthetic oxygen evolution. Estuarine, Coastal and Shelf Science , 113. pp. 272-282.

Davies, J.N., McCormack, C.V., Sankey, T.L., and Rasheed, M.A. (2012) Gladstone permanent transect seagrass monitoring: September 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davis, Aaron Marshall (2012) Dietary ecology of terapontid grunters (Pisces: Terapontidae) with particular reference to ontogeny and phylogeny. PhD thesis, James Cook University.

de Miranda, Luiz Bruner, Olle, Eugenio Dalle, Bergamo, Alessandro Luvizon, dos Santos Silva, Lourval, and Pinheiro Andutta, Fernando (2012) Circulation and salt intrusion in the Piacaguera Channel, Santos (SP). Brazilian Journal of Oceanography, 60 (1). pp. 11-23.

Davis, Aaron M., Lewis, Stephen E., Bainbridge, Zoë T., Glendenning, Lionel, Turner, Ryan D.R., and Brodie, Jon E. (2012) Dynamics of herbicide transport and partitioning under event flow conditions in the lower Burdekin region, Australia. Marine Pollution Bulletin, 65 (4-9). pp. 182-193.

Devlin, Michelle, Wenger, Amelia, Da Silva, Eduardo, Alvarez Romero, Jorge G., Waterhouse, Jane, and McKenzie, Len (2012) Extreme weather conditions in the Great Barrier Reef: drivers of change? In: Proceedings of the 12th International Coral Reef Symposium, pp. 1-5. From: 12th International Coral Reef Symposium, 9-13 July 2012, Cairns, QLD, Australia.

Davis, Benjamin, Johnston, Ross, Baker, Ronnie, and Sheaves, Marcus (2012) Fish utilisation of wetland nurseries with complex hydrological connectivity. PLoS ONE, 7 (11). pp. 1-11.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: November 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McCormack, C.V., and Rasheed, M.A. (2012) Gladstone Permanent Transect Seagrass Monitoring: October 2012 update report. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Davies, J.N., McKenna, S.A., Rasheed, M.A., and Taylor, H.A. (2012) Long-term seagrass monitoring in the Port of Thursday Island: February 2012. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Diedrich, Amy, and Tintore, Joaquin (2012) Multi-method approach to exploring social-ecological dimensions in a Mediterranean suburban beach setting. Coastal Management, 40 (3). pp. 301-311.

Diedrich, Amy, Huguet, Pablo Balaguer, and Subirana, Joaquín Tintoré (2011) Methodology for applying the limits of acceptable change process to the management of recreational boating in the Balearic Islands, Spain (Western Mediterranean). Ocean & Coastal Management, 54 (4). pp. 341-351.

Devlin, Michelle, Bricker, Suzanne, and Painting, Suzanne (2011) Comparison of five methods for assessing impacts of nutrient enrichment using estuarine case studies. Biogeochemistry, 106 (2). pp. 177-205.

Diedrich, A., Tintore, J., and Navines, F. (2010) Balancing science and society through establishing indicators for integrated coastal zone management in the Balearic Islands. Marine Policy, 34 (4). pp. 772-781.

Diedrich, Amy (2010) Cruise ship tourism in Belize: the implications of developing cruise ship tourism in an ecotourism destination. Ocean & Coastal Management, 53 (5-6). pp. 234-244.

Doupe, Robert G., and Burrows, Damien W. (2008) Thirty years later, should we be more concerned for the ongoing invasion of Mozambique Tilapia in Australia? Pacific Conservation Biology, 14 (4). pp. 235-238.

Duke, N.C., Meynecke, J.-O., Dittmann, S., Ellison, A.M., Anger, K., Berger, U., Cannicci, S., Diele, K., Ewel, K.C., Field, C.D., Koedam, N., Lee, S.Y., Marchand, C., Nordhaus, I., and Dahdouh-Guebas, F. (2007) A world without mangroves? Science, 317. pp. 41-42.

Doupe, Robert G., Lymbery, Alan J., and Pettit, Neil E. (2006) Stream salinization is associated with reduced taxonomic, but not functional diversity in a riparian plant community. Austral Ecology, 31 (3). pp. 388-393.

Doupe, Rob, Froend, Ray, and Pettit, Neil (2006) A comment on allocating regulated river water for the Ord River, Western Australia. Ecological Management and Restoration, 7 (1). pp. 32-36.

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Rivera Posada, Jairo A. (2012) Pathogenesis of crown-of-thorns starfish (Acanthaster planci L). PhD thesis, James Cook University.

Rasheed, M.A., Reason, C.L., McCormack, C.V., Chartrand, K.M., and Carter, A.B. (2012) Port Curtis and Rodds Bay seagrass monitoring program: November 2011. Report. Department of Agriculture, Fisheries and Forestry (DAFF), Cairns, QLD, Australia.

Rasheed, Michael A., and Unsworth, Richard K.F. (2011) Long-term climate-associated dynamics of a tropical seagrass meadow: implications for the future. Marine Ecology Progress Series, 422. pp. 93-103.

Russell, Tanya L., Kay, Brian H., and Skilleter, Greg A. (2009) Environmental effects of mosquito insecticides on saltmarsh invertebrate fauna. Aquatic Biology, 6. pp. 77-90.

Russell, Tanya L., and Hale, Peter T. (2009) Conservation of the false water rat (Xeromys myoides) depends on landscape complementation. Australian Mammalogy, 31 (2). pp. 81-87.

Rasheed, M.A., McKenna, S.A., Sankey, T.L., and Taylor, H.A. (2008) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: November 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., Taylor, H.A., and Sankey, T.L. (2008) Long term seagrass monitoring in Port Curtis and Rodds Bay, Gladstone: October 2007. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, Michael A., Dew, Kara R., McKenzie, Len J., Coles, Robert G., Kerville, Simon P., and Campbell, Stuart J. (2008) Productivity, carbon assimilation and intra-annual change in tropical reef platform seagrass communities of the Torres Strait, north-eastern Australia. Continental Shelf Research, 28 (16). pp. 2292-2303.

Rasheed, Michael, Taylor, Helen, Dew, Kara, Carter, Alex, and Sankey, Tonia (2007) Deepwater seagrass dynamics in Hay Point: measuring variability and monitoring impacts of capital dredging. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Dew, K.R., McKenna, S.A., Sankey, T.L., Taylor, H.A., and Carter, A. (2007) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2006. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Roelofs, Anthony, Rasheed, Michael, Thomas, Ross, McKenna, Skye, and Taylor, Helen (2006) Port of Weipa long term seagrass monitoring: 2003-2005. Report. Ports Corporation of Queensland, Cairns, QLD, Australia.

Rasheed, M.A., McKenna, S.A., and Thomas, R. (2005) Long-term seagrass monitoring in Port Curtis and Rodds Bay, Gladstone: October/November 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Thomas, R., and McKenna, S.A. (2005) Port of Abbot Point seagrass, algae and benthic macro-invertebrate community survey: March 2005. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, Michael, and McKenna, Skye (2005) Port of Karumba long term seagrass monitoring: progress report: October 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, M.A., Thomas, R., and McKenna, S.A. (2004) Port of Hay Point seagrass, algae and benthic macro-invertebrate community survey: July 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Rasheed, Michael A. (1999) Recovery of experimentally created gaps within a tropical Zostera capricorni (Aschers.) seagrass meadow, Queensland Australia. Journal of Experimental Marine Biology and Ecology, 235 (2). pp. 183-200.

Rosser, Zoe Catherine (1998) The role of disturbance in community dynamics and structuring of tropical rainforest stream communities. PhD thesis, James Cook University.

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Sheaves, Marcus (2016) Simple processes drive unpredictable differences in estuarine fish assemblages: baselines for understanding site-specific ecological and anthropogenic impacts. Estuarine, Coastal and Shelf Science , 170. pp. 61-69.

Smith, Timothy M., York, Paul H., Macreadie, Peter I., Keough, Michael J., Ross, D. Jeff, and Sherman, Craig D.H. (2016) Recovery pathways from small scale disturbance in a temperate Australian seagrass. Marine Ecology Progress Series, 542. pp. 97-108.

Sheaves, Marcus, Coles, Robert, Dale, Pat, Grech, Alana, Pressey, Robert L., and Waltham, Nathan J. (2016) Enhancing the value and validity of EIA: serious science to protect Australia's Great Barrier Reef. Conservation Letters. (In Press)

Sheaves, M., Baker, R., McLeod, I., Abrantes, K., Wani, J., and Barnett, A. (2016) The conservation status of Niugini black bass: a world-renowned sport fish with an uncertain future. Fisheries Management and Ecology. pp. 1-10. (In Press)

Schliep, M., Pernice, M., Sinutok, S., Bryant, C.V., York, P.H., Rasheed, M.A., and Ralph, P.J. (2015) Evaluation of reference genes for RT-QPCR studies in the seagrass Zostera muelleri exposed to light limitation. Scientific Reports, 5. pp. 1-11.

Sozou, A.M., McKenna, S.A., and Rasheed, M.A. (2015) Port of Karumba long-term seagrass monitoring: November 2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Schmitt, Klaus, and Duke, Norman C. (2015) Mangrove management, assessment and monitoring. In: Pancel, Laslo, and Köhl, Michael, (eds.) Tropical Forestry Handbook. Springer, Berlin, Germany, pp. 1-29.

Sheaves, Marcus, Brookes, Justin, Coles, Robert, Freckelton, Marnie, Groves, Paul, Johnston, Ross, and Wingberg, Pia (2014) Repair and revitalisation of Australia's tropical estuaries and coastal wetlands: opportunities and constraints for the reinstatement of lost function and productivity. Marine Policy, 47. pp. 23-38.

Sheaves, Marcus, Abrantes, Kátya G., and Johnston, Ross (2014) Deluge Inlet, a pristine small tropical estuary in north-eastern Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 261-275.

Stieglitz, Thomas (2014) Groundwater-ocean interaction and its effects on coastal ecological processes: are there groundwater-dependant ecosystems in the coastal zone? In: Abstracts from Goldschmidt 2014, p. 2385. From: Goldschmidt 2014 Conference, 8-13 June 2014 , Sacramento, CA, USA.

Sheaves, Marcus, Sheaves, Janine, Stegemann, Krista, and Molony, Brett (2014) Resource partitioning and habitat-specific dietary plasticity of two estuarine sparid fishes increase food web complexity. Marine and Freshwater Research, 65 (2). pp. 114-123.

Sardá, Rafael, O'Higgins, Tim, Cormier, Roland, Diedrich, Amy, and Tintoré, Joaquin (2014) A proposed ecosystem-based management system for marine waters: linking the theory of environmental policy to the practice of environmental management. Ecology and Society, 19 (4). pp. 1-14.

Stegemann, Krista Elizabeth (2013) Spatio-temporal patterns of faunal distribution along a near-pristine estuarine edge environment. Masters (Research) thesis, James Cook University.

Stieglitz, Thomas (2013) Habitat engineering by decadal-scale bioturbation around shipwrecks on the Great Barrier Reef mid-shelf. Marine Ecology Progress Series, 477. pp. 29-40.

Smith, Timothy M., York, Paul, Stanley, Annalise M., Macreadie, Peter, Keough, Michael J., Ross, D. Jeff, and Sherman, Craig D.H. (2013) Microsatellite primer development for the seagrass Zostera nigricaulis (Zosteraceae). Conservation Genetics Resources, 5 (3). pp. 607-610.

Sheaves, Marcus, Johnston, Ross, Johnson, Ashlee, Baker, Ronald, and Connolly, Rod M. (2013) Nursery function drives temporal patterns in fish assemblage structure in four tropical estuaries. Estuaries and Coasts, 36 (5). pp. 893-905.

Sheaves, M., and Molony, B. (2013) Reproductive periodicity of the sparid, Acanthopagrus pacificus, on a hierarchy of temporal scales. Journal of Fish Biology, 82 (2). pp. 538-554.

Stieglitz, Thomas C., Clarke, Jordan F., and Hancock, Gary J. (2013) The mangrove pump: the tidal flushing of animal burrows in a tropical mangrove forest determined from radionuclide budgets. Geochimica et Cosmochimica Acta, 102. pp. 12-22.

Stieglitz, Thomas C. (2012) The Yongala's "Halo of Holes" - systematic bioturbation close to a shipwreck. In: Harris, Peter T., and Baker, Elaine K., (eds.) Seafloor Geomorphology as Benthic Habitat: GeoHAB atlas of seafloor geomorphic features and benthic habitats. Elsevier, London, pp. 277-287.

Saenz-Agudelo, Pablo, Jones, Geoffrey P., Thorrold, Simon R., and Planes, Serge (2011) Connectivity dominates larval replenishment in a coastal reef fish metapopulation. Proceedings of the Royal Society of London Series B, Biological Sciences, 278 (1720). pp. 2954-2961.

Stieglitz, T., and Ridd, P. (2011) Of holes and depressions on the great barrier reef coast - and a physict's toolbox to study them. In: Abstracts from the Third Nereis Park Conference: benthic processes in a globally changing environment, pp. 29-30. From: Third Nereis Park Conference: benthic processes in a globally changing environment, 29-31 August 2011, Kristineberg, Sweden.

Stieglitz, T.C., Hancock, G., Clarke, J., and Cook, P.G. (2011) Radioisotopes and coastal research in the Great Barrier Reef. In: Abstracts from 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, pp. 106-107. From: 11th Australasian Environmental Isotopes Conference and 4th Australasian Hydrogeology Research Conference, 12-14 July 2011, Cairns, QLD, Australia.

Stieglitz, T.C., Clark, J., and Hancock, G. (2011) Rapid seawater circulation through animal burrows in mangrove forests: a significant source of saline groundwater to the tropical coastal ocean. In: Goldschmidt Conference Abstracts, p. 1944. From: Goldschmidt 2011 Earth, Life and Fire, 14-19 August 2011, Prague, Czech Republic.

Schuttenberg, Heidi Zabriskie (2010) Understanding and strengthening effective coral reef governance: a map & compass to guide strategic change in Southeast Asia. PhD thesis, James Cook University.

Scott, Colin, Lewis, Steve E., Milla, Rob, Taylor, Matthew C., Rodgers, Andrew J.W., Dumsday, Geoff, Brodie, Jon E., Oakeshott, John G., and Russell, Robyn J. (2010) A free-enzyme catalyst for the bioremediation of environmental atrazine contamination. Journal of Environmental Management, 91 (10). pp. 2075-2078.

Salmo, Severino G., and Duke, Norman C. (2010) Establishing mollusk colonization and assemblage patterns in planted mangrove stands of different ages in Lingayen Gulf, Philippines. Wetlands Ecology and Management, 18 (6). pp. 745-754.

Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).

Sheaves, Marcus, and Johnston, Ross (2009) Ecological drivers of spatial variability among fish fauna of 21 tropical Australian estuaries. Marine Ecology Progress Series, 385. pp. 245-260.

Sheaves, Marcus (2009) Consequences of ecological connectivity: the coastal ecosystem mosaic. Marine Ecology Progress Series, 391. pp. 107-115.

Sheppard, James K., Carter, Alex B., McKenzie, Len J., Pitcher, C. Roland, and Coles, Robert G. (2008) Spatial patterns of sub-tidal seagrasses and their tissue nutrients in the Torres Strait, northern Australia: implications for management. Continental Shelf Research, 28 (16). pp. 2282-2291.

Smith, L. D., Devlin, M., Haynes, D., and Gilmour, J.P. (2005) A demographic approach to monitoring the health of coral reefs. Marine Pollution Bulletin, 51 (1). pp. 399-407.

Salkeld, Daniel Joseph (2004) The ecology of a host-parasite relationship: haemogregarines and the eastern water skink, Eulamprus quoyii. PhD thesis, James Cook University.

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Taylor, H.A., Rasheed, M.A., and Carter, A.B. (2015) Port of Weipa long-term seagrass monitoring: 2000-2014. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Templeman, Michelle A., and Kingsford, Michael J. (2015) Predicting aqueous copper and zinc accumulation in the upside-down jellyfish Cassiopea maremetens through the use of biokinetic models. Environmental Monitoring and Assessment, 187 (416). pp. 1-8.

Trave, Claudia, and Sheaves, Marcus (2014) Bimini Islands: a characterization of the two major nursery areas; status and perspectives. SpringerPlus, 3. pp. 1-9.

Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2014) Port of Karumba long-term seagrass monitoring: November 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., Carter, A.B., and McKenna, S.A. (2014) Port of Weipa long-term seagrass monitoring: September 2013. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Carter, A.B., Davies, J.N., McKenna, S.A., Reason, C.L., and Rasheed, M.A. (2013) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: 2011-2013 report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Taylor, H.A., Rasheed, M.A., McKenna, S.A., Carter, A.B., Reason, C.L., and Loban, F. (2013) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: 2011-2012 report. Report. TropWATER, James Cook University, Cairns, QLD, Australia.

Thomas, Alexander L., Fujita, Kazuhiko, Iryu, Yasufumi, Bard, Edouard, Cabioch, Guy, Camoin, Gilbert, Cole, Julia E., Deschamps, Pierre, Durand, Nicolas, Hamelin, Bruno, Heindel, Katrin, Henderson, Gideon M., Mason, Andrew J., Matsuda, Hiroki, Menabreaz, Lucie, Omori, Akitoshi, Quinn, Terry, Sakai, Saburo, Sato, Tokiyuki, Sugihara, Kaoru, Takahashi, Yasunari, Thouveny, Nicolas, Tudhope, Alexander W., Webster, Jody, Westphal, Hildegard, and Yokoyama, Yusuke (2012) Assessing subsidence rates and paleo water-depths for Tahiti reefs using U-Th chronology of altered corals. Marine Geology, 295-298. pp. 86-94.

Taylor, Helen, and Rasheed, Michael (2011) Impacts of a fuel oil spill on seagrass meadows in a subtropical port, Gladstone, Australia: the value of long-term marine habitat monitoring in high risk areas. Marine Pollution Bulletin, 63 (5-12). pp. 431-437.

Taylor, H.A., Rasheed, M.A., McKenna, S.A., and Carter, A. (2011) Seagrass productivity, resilience to climate change and capacity for recovery in the Torres Strait: interim report 2011. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Taylor, Helen, McKenna, Skye, and Rasheed, Michael (2011) Seasonal dynamics, productivity and resilience of tropical deepwater seagrasses and their implications for port developments. In: Abstracts from the 48th Annual Conference of the Australian Marine Sciences Association, p. 138. From: AMSA 2011: 48th Annual Conference of the Australian Marine Sciences Association, 3-7 July 2011, Fremantle, WA, Australia.

Taylor, H.A., McKenna, S.A., and Rasheed, M.A. (2010) Long term seagrass monitoring in the Port of Thursday Island: February 2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Templeman, Michelle A., and Kingsford, Michael J. (2010) Trace element accumulation in Cassiopea sp. (Scyphozoa) from urban marine environments in Australia. Marine Environmental Research, 69 (2). pp. 63-72.

Thomas, R., Rasheed, M.A., and McKenna, S.A. (2005) Long term seagrass monitoring in Cairns Harbour and Trinity Inlet: December 2004. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

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Unsworth, Richard K.F., Rasheed, Michael A., Chartrand, Kathryn M., and Roelofs, Anthony J. (2012) Solar radiation and tidal exposure as environmental drivers of Enhalus acoroides dominated seagrass meadows. PLoS One, 7 (3). pp. 1-8.

Unsworth, R.K.F., McKenna, S.A., and Rasheed, M.A. (2010) Seasonal dynamics, productivity and resilience of seagrass at the Port of Abbot Point: 2008-2010. Report. Department of Employment, Economic Development and Innovation (DEEDI), Cairns, QLD, Australia.

Unsworth, R.K.F., McKenna, Skye, and Rasheed, M.A. (2009) Port of Karumba long term seagrass monitoring: October 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

Unsworth, R.K.F., McKenna, S.A., and Rasheed, M.A. (2008) Long term seagrass monitoring in the Port of Thursday Island: March 2008. Report. Department of Primary Industries and Fisheries (DPI&F), Cairns, QLD, Australia.

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Vermeiren, P., Munoz, C., Zimmer, M., and Sheaves, M. (2016) Hierarchical toolbox: ensuring scientific accuracy of citizen science for tropical coastal ecosystems. Ecological Indicators, 66. pp. 242-250.

Van Bressem, Marie-Francoise, Minton, Gianna, Sutaria, Dipani, Kelkar, Nachiket, Peter, Cindy, Zulkarnaen, Mohammad, Mansur, Rubaiyat M., Porter, Lindsay, Vargas, Luz H. Rodriguez, and Rajamani, Leela (2014) Cutaneous nodules in Irrawaddy dolphins: an emerging disease in vulnerable populations. Diseases of Aquatic Organisms, 107 (3). pp. 181-189.

Vermeiren, Peter Elisa Juliaan (2012) A landscape level understanding of habitat associations to integrate intertidal crabs into ecosystem models of tropical estuaries. PhD thesis, James Cook University.

van Tussenbroek, Brigitta I., Barba Santos, M. Guadalupe, Van Dijk, Jent Kornelis, Sanabria Alcaraz, S.N. Marisela, and Téllez Calderón, M. Lourdes (2008) Selective elimination of rooted plants from a tropical seagrass bed in a back-reef lagoon: a hypothesis tested by hurricane Wilma (2005). Journal of Coastal Research, 24 (1). pp. 278-281.

van Tussenbroek, Brigitta I., and van Dijk, Jent Kornelis (2007) Spatial and temporal variability in biomass and production of psammophytic Halimeda incrassata (Bryopsidales, Chlorophyta) in a Caribbean reef lagoon. Journal of Phycology, 43 (1). pp. 69-77.

van Tussenbroek, Brigitta I., Barba Santos, M. Guadalupe, and van Dijk, Jent Kornelis (2006) Unusual synchronous spawning by green algae (Bryopsidales), after the passage of Hurricane Wilma (2005). Botanica Marina, 49 (3). pp. 270-271.

Victor, S., Golbuu, Y., Wolanski, E., and Richmond, R.H. (2004) Fine sediment trapping in two mangrove-fringed estuaries exposed to contrasting land-use intensity, Palau, Micronesia. Wetlands Ecology and Management, 12 (4). pp. 277-283.

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Wilkinson, Adam D., Collier, Catherine J., Flores, Florita, and Negri, Andrew P. (2015) Acute and additive toxicity of ten photosystem-II herbicides to seagrass. Scientific Reports, 5. pp. 1-11.

Waltham, Nathan J., and Sheaves, Marcus (2015) Expanding coastal urban and industrial seascape in the Great Barrier Reef World Heritage Area: critical need for coordinated planning and policy. Marine Policy, 57. pp. 78-84.

Weeks, Scarla J., Magno-Canto, Marites M., Jaine, Fabrice R.A., Brodie, Jon, and Richardson, Anthony J. (2015) Unique sequence of events triggers manta ray feeding frenzy in the Southern Great Barrier Reef, Australia. Remote Sensing, 7 (3). pp. 3138-3152.

Waltham, Nathan J., and Sheaves, Marcus (2015) Expanding urban and industrial development in tropical seascapes necessitates green engineering and spatial planning thinking. Environmental Science and Technology, 49 (5). pp. 2598-2599.

Waterhouse, Jane, Brodie, Jon, Petus, Caroline, and Wolanski, Eric (2014) Hazard assessment for water quality threats to Torres Strait marine waters and ecosystems. In: Abstracts from the Society for Conservation Biology Oceania Conference, p. 102. From: Society for Conservation Biology Oceania Conference, 9-11 July 2014, Suva, Fiji.

Wolanski, Eric (2014) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands.

Wolanski, Eric, and Ducrotoy, Jean-Paul (2014) Estuaries of Australia in 2050 and beyond: a synthesis. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 1-13.

Waltham, Nathan J., Reichelt-Brushett, Amanda, McCann, Damian, and Eyre, Bradley D. (2014) Water and sediment quality, nutrient biochemistry and pollution loads in an urban freshwater lake: balancing human and ecological services. Environmental Science Processes and Impacts, 16 (12). pp. 2804-2813.

Wood, Apanie L., Butler, James R.A., Sheaves, Marcus, and Wani, Jacob (2013) Sport fisheries: opportunities and challenges for diversifying coastal livelihoods in the Pacific. Marine Policy, 42. pp. 305-314.

Wang, X.H., and Andutta, F.P. (2013) Sediment transport dynamics in ports, estuaries and other coastal environments. In: Manning, Andrew J., (ed.) Sediment Transport Processes and their Modelling Applications. InTech, Croatia, pp. 3-36.

Wolanski, Eric, Andutta, Fernando, and Delhez, Eric (2012) Estuarine hydrology. In: Bengtsson, Lars, Herschy, Reginald W., and Fairbridge, Rhodes W., (eds.) Encyclopedia of Lakes and Reservoirs. Encyclopedia of Earth Sciences Series . Springer-Verlag, pp. 238-249.

Woodroffe, Colin D., McGregor, Helen V., Lambeck, Kurt, Smithers, Scott G., and Fink, David (2012) Mid-Pacific microatolls record sea-level stability over the past 5000 yr. Geology, 40 (10). pp. 951-954.

Webster, A.J., Bartley, R., Armour, J.D., Brodie, J.E., and Thorburn, P.J. (2012) Reducing dissolved inorganic nitrogen in surface runoff water from sugarcane production systems. Marine Pollution Bulletin, 65 (4-9). pp. 128-135.

Warren-Rhodes, Kimberley, Schwarz, Anne-Maree, Boyle, Linda Ng, Albert, Joelle, Agalo, Stephen Suti, Warren, Regon, Bana, Andrew, Paul, Chris, Kodosiku, Ringo, Bosma, Wilko, Yee, Douglas, Rönnbäck, Patrik, Crona, Beatrice, and Duke, Norm (2011) Mangrove ecosystem services and the potential for carbon revenue programmes in Solomon Islands. Environmental Conservation, 38 (4). pp. 485-496.

Wolanski, Eric (2007) Protective functions of coastal forests and trees against natural hazards. In: Braatz, S., Fortuna, S., Broadhead, J., and Leslie, R., (eds.) Coastal Protection in the Aftermath of the Indian Ocean Tsunami: what role for forests and trees? Food and Agriculture Organization of the United Nations, Regional Office for Asia and the Pacific, Bangkok, Thailand, pp. 157-179.

Wolanski, Eric (2006) The Environment in Asia Pacific Harbours. Springer, Dordrecht, The Netherlands.

Wolanski, Eric (2002) Damming the Mekong and Ord River estuaries. 7th International Coastal Symposium. p. 1. (Unpublished)

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York, Paul H., Smith, Timothy M., Coles, Rob G., McKenna, Skye A., Connolly, Rod M., Irving, Andrew D., Jackson, Emma L., McMahon, Kathryn, Runcie, John W., Sherman, Craig D.H., Sullivan, Brooke K., Trevathan-Tackett, Stacy M., Brodersen, Kasper E., Carter, Alex B., Ewers, Carolyn J., Lavery, Paul S., Roelfsema, Chris M., Sinclair, Elizabeth A., Strydom, Simone, Tanner, Jason E., van Dijk, Kor-jent, Warry, Fiona Y., Waycott, Michelle, and Whitehead, Sam (2016) Identifying knowledge gaps in seagrass research and management: an Australian perspective. Marine Environmental Research. (In Press)

York, P.H., Davies, J.N., and Rasheed, M.A. (2014) Long-term seagrass monitoring in the Port of Mourilyan: 2013. Report. TropWATER, James Cook University, Cairns.

Yule, Catherine M., Boyero, Luz, and Marchant, Richard (2010) Effects of sediment pollution on food webs in a tropical river (Borneo, Indonesia). Marine and Freshwater Research, 61 (2). pp. 204-213.

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Zeng, Chaoshu, and Romano, Nicholas (2013) Nitrogenous wastes: often overlooked pollutants in aquatic environments. Journal of Marine Science Research and Development, 3 (3). p. 1.

Zhou, Renchao, Ling, Shaoping, Zhao, Wenming, Osada, Naoki, Chen, Sufang, Zhang, Meng, He, Ziwen, Bao, Hua, Zhong, Cairong, Zhang, Bing, Lu, Xuemei, Turissini, David, Duke, Norman C., Lu, Jian, Shi, Suhua, and Wu, Chung-I (2011) Population genetics in nonmodel organisms: II. natural selection in marginal habitats revealed by deep sequencing on dual platforms. Molecular Biology and Evolution, 28 (10). pp. 2833-2842.

This list was generated on Sat Jul 30 22:54:16 2016 EST.