Publications by the School of Marine and Tropical Biology

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Cole, Andrew J., Mata, Leonardo, Paul, Nicholas A., and De Nys, Rocky (2013) Using CO₂ to enhance carbon capture and biomass applications of freshwater macroalgae. GCB Bioenergy. pp. 1-9. (In Press)

Magnusson, Marie, Mata, Leonardo, De Nys, Rocky, and Paul, Nicholas Biomass, lipid and fatty acid production in large-scale cultures of the marine macroalga Derbesia tenuissima (Chlorophyta). Marine Biotechnology. (In Press)

Wardhaugh, Carl W., Stork, Nigel E., and Edwards, Will Canopy invertebrate community composition on rainforest trees: different microhabitats support very different invertebrate communities. Austral Ecology. pp. 1-11. (In Press)

Paul, Nicholas A., Neveux, Nicolas, Magnusson, Marie, and De Nys, Rocky Comparative production and nutritional value of “sea grapes” — the tropical green seaweeds Caulerpa lentillifera and C. racemosa. Journal of Applied Phycology. (In Press)

Militz, T.A., Southgate, P.C., Carton, A.G., and Hutson, K.S. Efficacy of garlic (Allium sativum) extract applied as a therapeutic immersion treatment for Neobenedenia sp. management in aquaculture. Journal of Fish Diseases. pp. 1-11. (In Press)

Alajmi, Fahad, and Zeng, Chaoshu Evaluation of microalgal diets for the intensive cultivation of the tropical calanoid copepod, Parvocalanus crassirostris. Aquaculture Research, Early View. pp. 1-14. (In Press)

Zeng, Chaoshu Improving Feeds and Feeding Practices for the Redclaw Aquaculture Industry. Report. Rural Industries Research and Development Corporation (RIRDC), Canberra, Australia. (In Press)

Edwards, David P., Sloan, Sean, Weng, Lingfei, Dirks, Paul, Sayer, Jeffrey, and Laurance, William F. Mining and the African environment. Conservation Letters. pp. 1-10. (In Press)

Karim, Fazlul, Kingsey-Henderson, Anne, Wallace, Jim, Godfrey, Paul, Arthington, Angela H., and Pearson, Richard G. Modelling hydrological connectivity of tropical floodplain wetlands via a combined natural and artificial stream network. Hydrological Processes. pp. 1-15. (In Press)

Nelson, Paul N., Gabriel, Jennifer, Filer, Colin, Banabas, Murom, Sayer, Jeffrey A., Curry, George N., Koczberski, Gina, and Venter, Oscar Oil palm and deforestation in Papua New Guinea. Conservation Letters. pp. 1-8. (In Press)

Abdul Wahab, M., De Nys, R., Webster, N., and Whalan, S. Phenology of sexual reproduction in the common coral reef sponge, Carteriospongia foliascens. Coral Reefs. (In Press)

Nagelkerken, Ivan, Sheaves, Marcus, Baker, Ronald, and Connolly, Rod M. The seascape nursery: a novel spatial approach to identify and manage nurseries for coastal marine fauna. Fish and Fisheries, In Press. (In Press)

Llewelyn, John, Schwarzkopf, Lin, Phillips, Benjamin L., and Shine, Richard (2014) After the crash: how do predators adjust following the invasion of a novel toxic prey type? Austral Ecology, 39 (2). pp. 190-197.

Lawton, Rebecca J., de Nys, Rocky, Skinner , Stephen, and Paul, Nicholas A. (2014) Isolation and identification of Oedogonium species and strains for biomass applications. PLoS ONE, 9 (3). pp. 1-9.

Tang, Lei, Smith-Keune, Carolyn, Gardner, Michael G., and Hardesty, Britta Denise (2014) Development, characterisation and cross-species amplification of 16 novel microsatellite markers for the endangered Blackthroated Finch (Poephila cincta) in Australia. Conservation Genetics Resources, 6 (1). pp. 143-146.

Baker, Ronald, Buckland, Amanda, and Sheaves, Marcus (2014) Fish gut content analysis: robust measures of diet composition. Fish and Fisheries, 15 (1). pp. 170-177.

Dewald, Julius R., and Pike, David A. (2014) Geographical variation in hurricane impacts among sea turtle populations. Journal of Biogeography, 41 (2). pp. 307-316.

Chivers, Douglas P., McCormick, Mark I., Nilsson, Göran E., Munday, Philip L., Watson, Sue-Ann, Meekan, Mark, Mitchell, Matthew D., Corkill, Katherine C., and Ferrari, Maud C.O. (2014) Impaired learning about predators and lower survival under elevated CO2: a consequence of neurotransmitter interference. Global Change Biology, 20 (2). pp. 515-522.

Gamble, S., Carton, A.G., and Pirozzi, I. (2014) Open-top static respirometry is a reliable method to determine the routine metabolic rate of barramundi, Lates calcarifer. Marine and Freshwater Behaviour and Physiology, 47 (1). pp. 19-28.

Kingsford, M.J., Finn, M.D., O'Callaghan, M.D., Atema, J., and Gerlach, G. (2014) Planktonic larval duration, age and growth of Ostorhinchus doederleini (Pisces: Apogonidae) on the southern Great Barrier Reef, Australia. Marine Biology, 161 (2). pp. 245-259.

Vandamme, S.G., Maes, G.E., Raeymaekers, J.A.M., Cottenie, K., Imsland, A.K., Hellemans, B., Lacroix, G., Mac Aoidh, E., Martinsohn, J.T., Martínez, P., Robbens, J., Vilas, R., and Volckaert, F.A.M. (2014) Regional environmental pressure influences population differentiation in turbot (Scophthalmus maximus). Molecular Ecology, 23 (3). pp. 618-636.

Angell, Alex R., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2014) Variation in amino acid content and its relationship to nitrogen content and growth rate in Ulva ohnoi (Chlorophyta). Journal of Phycology, 50 (1). pp. 216-226.

Paul, Nicholas A., Svensson, Carl Johan, de Nys, Rocky, and Steinberg, Peter D. (2014) Simple growth patterns can create complex trajectories for the ontogeny of constitutive chemical defences in seaweeds. PLoS ONE, 9 (1). pp. 1-10.

Taylor, Brett M. (2014) Drivers of protogynous sex change differ across spatial scales. Proceedings of the Royal Society of London Series B, Biological Sciences, 281 (1775). pp. 1-8.

Machado, Lorenna, Magnusson, Marie, Paul, Nicholas A., de Nys, Rocky, and Tomkins, Nigel (2014) Effects of marine and freshwater macroalgae on in vitro total gas and methane production. PLoS ONE, 9 (1). pp. 1-11.

McNamara, M.K.A., Miller, T.L., and Cribb, T.H. (2014) Evidence for extensive cryptic speciation in trematodes of butterflyfishes (Chaetodontidae) of the tropical Indo-West Pacific. International Journal for Parasitology, 44 (1). pp. 37-48.

Pike, David A. (2014) Forecasting the viability of sea turtle eggs in a warming world. Global Change Biology, 20 (1). pp. 7-15.

Hagihara, Rie, Jones, Rhondda E., Grech, Alana, Lanyon, Janet M., Sheppard, James K., and Marsh, Helene (2014) Improving population estimates by quantifying diving and surfacing patterns: a dugong example. Marine Mammal Science, 30 (1). pp. 348-366.

Edwards, David P., Gilroy, James J., Woodcock, Paul, Edwards, Felicity A., Larsen, Trond H., Andrews, David J.R., Derhé, Mia A., Docherty, Teegan D.S., Hsu, Wayne W., Mitchell, Simon L., Ota, Takahiro, Williams, Leah J., Laurance, William F., Hamer, Keith C., and Wilcove, David S. (2014) Land-sharing versus land-sparing logging: reconciling timber extraction with biodiversity conservation. Global Change Biology, 20 (1). pp. 183-191.

Neveux, N., Yuen, A.K.L., Jazrawi, C., Magnusson, M., Haynes, B.S., Masters, A.F., Montoya, A., Paul, N.A., Maschmeyer, T., and de Nys, R. (2014) Biocrude yield and productivity from the hydrothermal liquefaction of marine and freshwater green macroalgae. Bioresource Technology, 155. pp. 334-341.

Jerry, Dean R. (2014) Biology and Culture of Asian Seabass Lates calcarifer. CRC Press, Boca Raton, FL, USA.

Kan, Tao, Grierson, Scott, De Nys, Rocky, and Strezov, Vladimir (2014) Comparative assessment of the thermochemical conversion of freshwater and marine micro- and macroalgae. Energy & Fuels, 28 (1). pp. 104-114.

Andutta, Fernando P., Ridd, Peter V., Deleersnijder, Eric, and Prandle, David (2014) Contaminant exchange rates in estuaries: new formulae accounting for advection and dispersion. Progress in Oceanography, 120. pp. 139-153.

Sheaves, Marcus, Abrantes, Kátya G., and Johnston, Ross (2014) Deluge Inlet, a pristine small tropical estuary in north-eastern Australia. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 261-275.

Wolanski, Eric, and Ducrotoy, Jean-Paul (2014) Estuaries of Australia in 2050 and beyond: a synthesis. In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 1-13.

Romano, Nicholas, Wu, Xugan, Zeng, Chaoshu, Genodepa, Jerome, and Elliman, Jennifer (2014) Growth, osmoregulatory responses and changes to the lipid and fatty acid composition of organs from the mud crab, Scylla errata, over a road salinity range. Marine Biology Research, 10 (5). pp. 460-471.

Hobbs, Jean-Paul A., van Herwerden, Lynne, Pratchett, Morgan S., and Allen, Gerald R. (2014) Hybridisation among butterflyfishes. In: Pratchett , Morgan S., Berumen , Michael L., and Kapoor , B.G., (eds.) Biology of Butterflyfishes. CRC Press, Boca Raton, FL, USA, pp. 48-69.

Hutson, Kate S. (2014) Infectious diseases of Asian seabass and health management. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 102-136.

Brunnschweiler, Juerg M., Abrantes, Kátya G., and Barnett, Adam (2014) Long-term changes in species composition and relative abundances of sharks at a provisioning site. PLoS ONE, 9 (1). pp. 1-10.

Carton, Alexander G., and Jones, Ben (2014) Post-harvest quality in farmed Lates calcarifer. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 229-257.

Staunton, Kyran M., Robson, Simon K.A., Burwell, Chris J., Reside, April E., and Williams, Stephen E. (2014) Projected distributions and diversity of flightless ground beetles within the Australian Wet Tropics and their environmental correlates. PLoS ONE, 9 (2). pp. 1-16.

Sheaves, Marcus, Sheaves, Janine, Stegemann, Krista, and Molony, Brett (2014) Resource partitioning and habitat-specific dietary plasticity of two estuarine sparid fishes increase food web complexity. Marine and Freshwater Research, 65 (2). pp. 114-123.

Butt, Nathalie, Malhi, Yadvinder, New, Mark, Macia, Manuel J., Lewis, Simon, López-gonzález, Gabriela, Laurance, William F., Laurance, Susan, Luizão, Regina, Andrade, Ana, Baker, Timothy R., Almeida, Samual, and Phillips, Oliver L. (2014) Shifting dynamics of climate-functional groups in old-growth Amazonian forests. Plant Ecology and Diversity, 7 (1-2). pp. 267-279.

Vucko, M.J., Poole, A.J., Carl, C., Sexton, B.A., Glenn, F.L., Whalan, S., and de Nys, R. (2014) Using textured PDMS to prevent settlement and enhance release of marine fouling organisms. Biofouling, 30 (1). pp. 1-16.

Fisher, Diana O., Johnson, Chris N., Lawes, Michael J., Fritz, Susanne A., McCallum, Hamish, Blomberg, Simon P., VanDerWal, Jeremy, Abbott, Brett, Frank, Anke, Legge, Sarah, Letnic, Mike, Thomas, Colette R., Fisher, Alaric, Gordon, Iain J., and Kutt, Alex (2014) The current decline of tropical marsupials in Australia: is history repeating? Global Ecology and Biogeography , 23 (2). pp. 181-190.

Kingsford, Michael J., and Mooney, Christopher J. (2014) The ecology of box jellyfishes (Cubozoa). In: Pitt, Kylie A., and Lucas, Cathy H., (eds.) Jellyfish Blooms. Springer, Dordrecht, The Netherlands, pp. 267-302.

Jerry, Dean R., and Smith-Keune, Carolyn (2014) The genetics of Asian seabass. In: Jerry, Dean R., (ed.) Biology and Culture of Asian Seabass Lates Calcarifer. CRC Press, Boca Raton, FL, USA, pp. 137-177.

Komyakova, Valeriya, Munday, Philip L., and Jones, Geoffrey P. (2013) Relative importance of coral cover, habitat complexity and diversity in determining the structure of reef fish communities. PLoS ONE, 8 (12). pp. 1-12.

de Paula Silva, Pedro H., Paul, Nicholas A., de Nys, Rocky, and Mata, Leonardo (2013) Enhanced production of green tide algal biomass through additional carbon supply. PLoS ONE, 8 (12). pp. 1-7.

Pike, D.A., and Mitchell, J.C. (2013) Burrow-dwelling ecosystem engineers provide thermal refugia throughout the landscape. Animal Conservation, 16 (6). pp. 694-703.

Kemp, Darrell J., Holmes, Claire, Congdon, Bradley C., and Edwards, Will (2013) Colour polymorphism in spiny spiders (Gasteracantha fornicata): testing the adaptive significance of a geographically clinal sensory lure. Ethology, 119 (12). pp. 1126-1137.

Elphick, Melanie J., Pike, David A., Bezzina, Chalene, and Shine, Richard (2013) Cues for communal egg-laying in lizards (Bassiana duperreyi, Scincidae). Biological Journal of the Linnean Society, 110 (4). pp. 839-842.

Hoey, A.S., Brandl, S.J., and Bellwood, D.R. (2013) Diet and cross-shelf distribution of rabbitfishes (f. Siganidae) on the northern Great Barrier Reef: implications for ecosystem function. Coral Reefs, 32 (4). pp. 973-984.

Dubois, Baptiste, Tomkins, Nigel W., Kinley, Robert D., Bai, Mei, Seymour, Scott, Paul, Nicholas A., and de Nys, Rocky (2013) Effect of tropical algae as additives on rumen in vitro gas production and fermentation characteristics. American Journal of Plant Sciences, 4 (12B). pp. 34-43.

Sapsford, Sarah J., Alford, Ross A., and Schwarzkopf, Lin (2013) Elevation, temperature, and aquatic connectivity all influence the infection dynamics of the amphibian chytrid fungus in adult frogs. PLoS ONE, 8 (12). pp. 1-12.

Cernusak, Lucas A., Ubierna, Nerea, Winter, Klaus, Holtum, Joseph A.M., Marshall, John D., and Farquhar, Graham D. (2013) Environmental and physiological determinants of carbon isotope discrimination in terrestrial plants. New Phytologist, 200 (4). pp. 950-965.

Torda, G., Lundgren, P., Willis, B.L., and van Oppen, M.J.H. (2013) Genetic assignment of recruits reveals short- and long-distance larval dispersal in Pocillopora damicornis on the Great Barrier Reef. Molecular Ecology, 22 (23). pp. 5821-5834.

Jones, David B., Jerry, Dean R., Forêt, Sylvain, Konovalov, Dmitry A., and Zenger, Kyall R. (2013) Genome-wide SNP validation and mantle tissue transcriptome analysis in the silver-lipped pearl oyster, Pinctada maxima. Marine Biotechnology, 15 (6). pp. 647-658.

Lee-Cruz, Larisa, Edwards, David P., Tripathi, Binu M., and Adams, Jonathan M. (2013) Impact of logging and forest conversion to oil palm plantations on soil bacterial communities in Borneo. Applied and Environmental Microbiology, 79 (23). pp. 7290-7297.

Rowley, Jodi J.L., Gleason, Frank H., Andreou, Demetra, Marshall, Wyth L., Lilje, Osu, and Gozlan, Rodolphe (2013) Impacts of mesomycetozoean parasites on amphibian and freshwater fish populations. Fungal Biology Reviews, 27 (3). pp. 100-111.

Jeans, Jennifer, Campbell, Douglas A., and Hoogenboom, Mia O. (2013) Increased reliance upon photosystem II repair following acclimation to high-light by coral-dinoflagellate symbioses. Photosynthesis Research, 118 (3). pp. 219-229.

Johansson, C.L., van de Leemput, I.A., Depczynski, M., Hoey, A.S., and Bellwood, D.R. (2013) Key herbivores reveal limited functional redundancy on inshore coral reefs. Coral Reefs, 32 (4). pp. 963-972.

Chen, W., Tang, Z.H., Fan, X.G., Wang, Y., and Pike, D.A. (2013) Maternal investment increases with altitude in a frog on the Tibetan Plateau. Journal of Evolutionary Biology, 26 (12). pp. 2710-2715.

Munday, Philip L., Warner, Robert R., Monro, Keyne, Pandolfi, John M., and Marshall, Dustin J. (2013) Predicting evolutionary responses to climate change in the sea. Ecology Letters, 16 (12). pp. 1488-1500.

Mata, Leonardo, Wright, Emily, Owens, Leigh, Paul, Nicholas, and de Nys, Rocky (2013) Water-soluble natural products from seaweed have limited potential in controlling bacterial pathogens in fish aquaculture. Journal of Applied Phycology, 25 (6). pp. 1963-1973.

Welsh, J.Q., Goatley, C.H.R., and Bellwood, D.R. (2013) The ontogeny of home ranges: evidence from coral reef fishes. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1773). pp. 1-7.

Roberts, David A., de Nys, Rocky, and Paul, Nicholas A. (2013) The effect of CO2 on algal growth in industrial waste water for bioenergy and bioremediation applications. PLoS ONE, 8 (11). pp. 1-12.

Jones, David B., Jerry, Dean R., Khatkar, Mehar S., Raadsma, Herman W., and Zenger, Kyall R. (2013) A high-density SNP genetic linkage map for the silver-lipped pearl oyster, Pinctada maxima: a valuable resource for gene localisation and marker-assisted selection. BMC Genomics, 14. pp. 1-18.

Currey, L.M., Heupel, M.R., Simpfendorfer, C.A., and Clark, T.D. (2013) Blood lactate loads of redthroat emperor Lethrinus miniatus associated with angling stress and exhaustive exercise. Journal of Fish Biology, 83 (5). pp. 1401-1406.

Curley, B.G., Glasby, T.M., Curley, A.J., Creese, R.G., and Kingsford, M.J. (2013) Enhanced numbers of two temperate reef fishes in a small, partial-take marine protected area related to spearfisher exclusion. Biological Conservation, 167. pp. 435-445.

Miller, Terrence L., Small, Hamish J., Peemoeller, Bhae-Jin, Gibbs, David A., and Shields, Jeffrey D. (2013) Experimental infections of Orchitophrya stellarum (Scuticociliata) in American blue crabs (Callinectes sapidus) and fiddler crabs (Uca minax). Journal of Invertebrate Pathology, 114 (3). pp. 346-355.

Connolly, N.M., and Pearson, R.G. (2013) Nutrient enrichment of a heterotrophic stream alters leaf litter nutritional quality and shredder physiological condition via the microbial pathway. Hydrobiologia, 718 (1). pp. 85-92.

Veron, John (2013) Overview of the taxonomy of zooxanthellate Scleractinia. Zoological Journal of the Linnean Society, 169 (3). pp. 485-508.

Goodman, Brett A., Schwarzkopf, Lin, and Krockenberger, Andrew K. (2013) Phenotypic integration in response to incubation environment adaptively influences habitat choice in a tropical lizard. American Naturalist, 182 (5). pp. 666-673.

Geraylou, Zahra, Souffreau, Caroline, Rurangwa, Eugene, Maes, Gregory E., Spanier, Katina I., Courtin, Christophe M., Delcour, Jan A., Buyse, Johan, and Ollevier, Frans (2013) Prebiotic effects of arabinoxylan oligosaccharides on juvenile Siberian sturgeon (Acipenser baerii) with emphasis on the modulation of the gut microbiota using 454 pyrosequencing. FEMS Microbiology Ecology, 86 (2). pp. 357-371.

Sato, Yui, Willis, Bette L., and Bourne, David G. (2013) Pyrosequencing-based profiling of archaeal and bacterial 16S rRNA genes identifies a novel archaeon associated with black band disease in corals. Environmental Microbiology, 15 (11). pp. 2994-3007.

Wood, Apanie L., Butler, James R.A., Sheaves, Marcus, and Wani, Jacob (2013) Sport fisheries: opportunities and challenges for diversifying coastal livelihoods in the Pacific. Marine Policy, 42. pp. 305-314.

Chong, Caroline, Edwards, Will, Pearson, Richard, and Waycott, Michelle (2013) Sprouting and genetic structure vary with flood disturbance in the tropical riverine paperbark tree, Melaleuca leucadendra (Myrtaceae). American Journal of Botany, 100 (11). pp. 2250-2260.

Raina, Jean-Baptiste, Tapiolas, Dianne M., Foret, Sylvain, Lutz, Adrian, Abrego, David, Ceh, Janja, Seneca, Francois O., Clode, Peta L., Bourne, David G., Willis, Bette L., and Motti, Cherie A. (2013) DMSP biosynthesis by an animal and its role in coral thermal stress response. Nature, 502 (7473). pp. 677-691.

Momigliano, Paolo, Sparrow, Leanne, Blair, David, and Heimann, Kirsten (2013) The diversity of Coolia spp. (Dinophyceae Ostreopsidaceae) in the central Great Barrier Reef region. PLoS ONE, 8 (10). pp. 1-11.

Northfield, Tobin D., and Ives, Anthony R. (2013) Coevolution and the effects of climate change on interacting species. PLoS Biology, 11 (10). pp. 1-13.

Walther, Benjamin D., Kingsford, Michael J., and McCulloch, Malcolm T. (2013) Environmental records from Great Barrier Reef corals: inshore versus offshore drivers. PLoS ONE, 8 (10). pp. 1-14.

Narendra, Ajay, Alkaladi, Ali, Raderschall, Chloé A., Robson, Simon K.A., and Ribi, Willi A. (2013) Compound eye adaptations for diurnal and nocturnal lifestyle in the intertidal ant, Polyrhachis sokolova. PLoS ONE, 8 (10). pp. 1-6.

Cantacessi, Cinzia, Seddon, Jennifer M., Miller, Terrence L., Leow, Chiuan Yee, Thomas, Laëtitia, Mason, Lyndel, Willis, Charlene, Walker, Giselle, Loukas, Alex, Gasser, Robin B., Jones, Malcolm K., and Hofmann, Andreas (2013) A genome-wide analysis of annexins from parasitic organisms and their vectors. Scientific Reports, 3. pp. 1-8.

Knight, Jon M., Griffin, Lachlan, Dale, Pat E.R., and Sheaves, Marcus (2013) Short-term dissolved oxygen patterns in sub-tropical mangroves. Estuarine, Coastal and Shelf Science, 131. pp. 290-296.

Laurance, Susan G.W., Jones, Dean, Westcott, David, McKeown, Adam, Harrington, Graham, and Hilbert, David W. (2013) Habitat fragmentation and ecological traits influence the prevalence of avian blood parasites in a tropical rainforest landscape. PLoS ONE, 8 (10). pp. 1-8.

Lawton, Rebecca J., Mata, Leonardo, de Nys, Rocky, and Paul, Nicholas A. (2013) Algal bioremediation of waste waters from land-based aquaculture using Ulva: selecting target species and strains. PLoS ONE, 8 (10). pp. 1-10.

Bateman, Brooke L., Murphy, Helen T., Reside, April E., Mokany, Karel, and VanDerWal, Jeremy (2013) Appropriateness of full-, partial- and no-dispersal scenarios in climate change impact modelling. Diversity and Distributions, 19 (10). pp. 1224-1234.

Hulvey, Kristin B., Hobbs, Richard J., Standish, Rachel J., Lindenmayer, David B., Lach, Lori, and Perring, Michael P. (2013) Benefits of tree mixes in carbon plantings. Nature Climate Change, 3. pp. 869-874.

Manassa, R.P., Dixson, D.L., McCormick, M.I., and Chivers, D.P. (2013) Coral reef fish incorporate multiple sources of visual and chemical information to mediate predation risk. Animal Behaviour, 86 (4). pp. 717-722.

Chivers, Douglas P., Dixson, Danielle L., White, James, McCormick, Mark I., and Ferrari, Maud C.O. (2013) Degradation of chemical alarm cues and assessment of risk throughout the day. Ecology and Evolution, 3 (11). pp. 3925-3934.

McCormick, Mark I., and Lönnstedt, Oona M. (2013) Degrading habitats and the effect of topographic complexity on risk assessment. Ecology and Evolution, 3 (12). pp. 4221-4229.

Miller, Terrence L., and Cribb, Thomas H. (2013) Dramatic phenotypic plasticity within species of Siphomutabilus n. g. (Digenea: Cryptogonimidae) from Indo-Pacific caesionines (Perciformes: Lutjanidae). Systematic Parasitology, 86 (2). pp. 101-112.

Brazenor, Alexander K., and Hutson, Kate S. (2013) Effect of temperature and salinity on egg hatching and description of the life cycle of Lernanthropus latis (Copepoda: Lernanthropidae) infecting barramundi, Lates calcarifer. Parasitology International, 62 (5). pp. 437-447.

Graham, Erin M., Baird, Andrew H., Willis, Bette L., and Connolly, Sean R. (2013) Effects of delayed settlement on post-settlement growth and survival of scleractinian coral larvae. Oecologia, 173 (2). pp. 431-438.

Nash, Kirsty L., Graham, Nicholas A.J., and Bellwood, David R. (2013) Fish foraging patterns, vulnerability to fishing, and implications for the management of ecosystem function across scale. Ecological Applications, 23 (7). pp. 1632-1644.

Pike, David A. (2013) Forecasting range expansion into ecological traps: climate-mediated shifts in sea turtle nesting beaches and human development. Global Change Biology, 19 (10). pp. 3082-3092.

Grech, A., Bos, M., Brodie, J., Coles, R., Dale, A., Gilbert, R., Hamann, M., Marsh, H., Neil, K., Pressey, R.L., Rasheed, M.A., Sheaves, M., and Smith, A. (2013) Guiding principles for the improved governance of port and shipping impacts in the Great Barrier Reef. Marine Pollution Bulletin, 75 (1). pp. 8-20.

Narendra, Ajay, Raderschall, Chloé A., and Robson, Simon K.A. (2013) Homing abilities of the Australian intertidal ant Polyrhachis sokolova. Journal of Experimental Biology, 216 (19). pp. 3674-3681.

Miller, Gabrielle M., Watson, Sue-Ann, McCormick, Mark I., and Munday, Philip L. (2013) Increased CO2 stimulates reproduction in a coral reef fish. Global Change Biology, 19 (10). pp. 3037-3045.

Zheng, Yadong, Blair, David, and Bradley, Janette E. (2013) Phyletic distribution of fatty acid-binding protein genes. PLoS ONE, 8 (10). pp. 1-9.

Duchene, David, Klanten, Selma O., Munday, Philip L., Herler, Jürgen, and van Herwerden, Lynne (2013) Phylogenetic evidence for recent diversification of obligate coral-dwelling gobies compared with their host corals. Molecular Phylogenetics and Evolution, 69 (1). pp. 123-132.

Hasan, Jafar, Webb, Hayden K., Truong, Vi Khanh, Pogodin, Sergey, Baulin, Vladimir A., Watson, Gregory S., Watson, Jolanta A., Crawford, Russell J., and Ivanova, Elena P. (2013) Selective bactericidal activity of nanopatterned superhydrophobic cicada Psaltoda claripennis wing surfaces. Applied Microbiology and Biotechnology, 79 (20). pp. 9257-9262.

Boström-Einarsson, Lisa, Bonin, Mary C., Munday, Philip L., and Jones, Geoffrey P. (2013) Strong intraspecific competition and habitat selectivity influence abundance of a coral-dwelling damselfish. Journal of Experimental Marine Biology and Ecology, 448. pp. 85-92.

Edwards, David P., Woodcock, Paul, Newton, Rob J., Edwards, Felicity A., Andrews, David J.R., Docherty, Teegan D.S., Mitchell, Simon L., Ota, Takahiro, Benedick, Suzan, Bottrell, Simon H., and Hamer, Keith C. (2013) Trophic flexibility and the persistence of understory birds in intensively logged rainforest. Conservation Biology, 27 (5). pp. 1079-1086.

Puschendorf, Robert, Hodgson, Lauren, Alford, Ross A., Skerratt, Lee F., and VanDerWal, Jeremy (2013) Underestimated ranges and overlooked refuges from amphibian chytridiomycosis. Diversity and Distributions, 19 (10). pp. 1313-1321.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Within-colony feeding selectivity by a corallivorous reef fish: foraging to maximize reward? Ecology and Evolution, 3 (12). pp. 4109-4118.

Flores, Florita, Collier, Catherine J., Mercurio, Philip, and Negri, Andrew P. (2013) Phytotoxicity of four photosystem II herbicides to tropical seagrasses. PLoS ONE, 8 (9). pp. 1-12.

Militz, Thane A., Southgate, Paul C., Carton, Alexander G., and Hutson, Kate S. (2013) Dietary supplementation of garlic (Allium sativum) to prevent monogenean infection in aquaculture. Aquaculture, 408-409. pp. 95-99.

Magnusson, Marie, Heimann, Kirsten, Ridd, Michael, and Negri, Andrew P. (2013) Pesticide contamination and phytotoxicity of sediment interstitial water to tropical benthic microalgae. Water Research, 47 (14). pp. 5211-5221.

Botté, Emmanuelle S., Smith-Keune, Carolyn, and Jerry, Dean R. (2013) Temperature: a prolonged confounding factor on cholinesterase activity in the tropical reef fish Acanthochromis polyacanthus. Aquatic Toxicology, 140-141. pp. 337-339.

Warren, R., Lowe, J.A, Arnell, N.W, Hope, C., Berry, P., Brown, S., Gambhir, A., Gosling, S.N., Nicholls, R.J., O'Hanley, J., Osborn, T.J., Osborn, T., Price, J., Raper, S.C.B., Rose, G., and Vanderwal, J. (2013) The AVOID programme's new simulations of the global benefits of stringent climate change mitigation. Climatic Change, 120 (1-2). pp. 55-70.

Hoffmann, Bernd, Kahmen, Ansgar, Cernusak, Lucas A., Arndt, Stefan K., and Sachse, Dirk (2013) Abundance and distribution of leaf wax n-alkanes in leaves of Acacia and Eucalyptus trees along a strong humidity gradient in northern Australia. Organic Geochemistry, 62. pp. 62-67.

Todd, Erica V., Blair, David, Farley, Sharon, Farrington, Lachlan, FitzSimmons, Nancy N., Georges, Arthur, Limpus, Colin J., and Jerry, Dean R. (2013) Contemporary genetic structure reflects historical drainage isolation in an Australian snapping turtle, Elseya albagula. Zoological Journal of the Linnean Society, 169 (1). pp. 200-214.

Haapkylä, J., Melbourne-Thomas, J., Flavell, M., and Willis, B.L. (2013) Disease outbreaks, bleaching and a cyclone drive changes in coral assemblages on an inshore reef of the Great Barrier Reef. Coral Reefs, 32 (3). pp. 815-824.

Boaden, A.E., and Kingsford, M.J. (2013) Distributions and habitat associations of the bridled monocle bream Scolopsis bilineatus (Nemipteridae): a demographic approach. Journal of Fish Biology, 83 (3). pp. 618-641.

Heimann, Kirsten (2013) Emerging new energy technologies. Australian and New Zealand Property Journal, 4 (3). pp. 264-271.

Hodge, Jennifer R., Read, Charmaine I., Bellwood, David R., and van Herwerden, Lynne (2013) Evolution of sympatric species: a case study of the coral reef fish genus Pomacanthus (Pomacanthidae). Journal of Biogeography, 40 (9). pp. 1676-1687.

Schroeder, J., Dugdale, H.L., Radersma, R., Hinsch, M., Buehler, D.M., Saul, J., Porter, L., Liker, A., De Cauwer, I., Johnson, P.J., Santure, A.W., Griffin, A.S., Bolund, E., Ross, L., Webb, T.J., Feulner, P.G.D., Winney, I., Szulkin, M., Komdeur, J., Versteegh, M.A., Hemelrijk, C.K., Svensson, E.I., Edwards, H., Karlsson, M., West, S.A., Barrett, E.L.B., Richardson, D.S., van den Brink, V., Wimpenny, J.H., Ellwood, S.A., Rees, M., Matson, K.D., Charmantier, A., dos Remedios, N., Schneider, N.A., Teplitsky, C., Laurance, W.F., Butlin, R.K., and Horrocks, N.P.C. (2013) Fewer invited talks by women in evolutionary biology symposia. Journal of Evolutionary Biology, 26 (9). pp. 2063-2069.

Delfino, Massimo, Scheyer, Torsten M., Chesi, Francesco, Fletcher, Tamara, Gemel, Richard, Macdonald, Stewart, Rabi, Márton, and Salisbury, Steven W. (2013) Gross morphology and microstructure of type locality ossicles of Psephophorus polygonus Meyer, 1847 (Testudines, Dermochelyidae). Geological Magazine, 150 (5). pp. 767-782.

Brooker, R.M., Munday, P.L., Mcleod, I.M., and Jones, G.P. (2013) Habitat preferences of a corallivorous reef fish: predation risk versus food quality. Coral Reefs, 32 (3). pp. 613-622.

Baker, Ronald, Fry, Brian, Rozas, Lawrence P., and Minello, Thomas J. (2013) Hydrodynamic regulation of salt marsh contributions to aquatic food webs. Marine Ecology Progress Series, 490. pp. 37-52.

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Montanari, Stefano R., Gardner, Michael G., Hobbs, Jean-Paul A., Pratchett, Morgan S., Bay, Line K., and van Herwerden, Lynne (2013) Isolation and characterization of twenty microsatellite markers for the study of hybridization in butterflyfish of the genus Chaetodon. Conservation Genetics Resources, 5 (3). pp. 783-786.

Brandl, S.J., and Bellwood, D.R. (2013) Morphology, sociality, and ecology: can morphology predict pairing behavior in coral reef fishes? Coral Reefs, 32 (3). pp. 835-846.

Taylor, B.M., and Mills, J.S. (2013) Movement and spawning migration patterns suggest small marine reserves can offer adequate protection for exploited emperorfishes. Coral Reefs, 32 (4). pp. 1077-1087.

Horne, John B., Momigliano, Paolo, van Herwerden, Lynne, and Newman, Stephen J. (2013) Murky waters: searching for structure in genetically depauperate blue threadfin populations of Western Australia. Fisheries Research, 146. pp. 1-6.

Gibson, Luke, Lynam, Antony J., Bradshaw, Corey J.A., He, Fangliang, Bickford, David P., Woodruff, David S., Bumrungsri, Sara, and Laurance, William F. (2013) Near-complete extinction of native small mammal fauna 25 years after forest fragmentation. Science, 341 (6153). pp. 1508-1510.

Lönnstedt, Oona M., Munday, Philip L., McCormick, Mark I., Ferrari, Maud C.O., and Chivers, Douglas P. (2013) Ocean acidification and impaired responses to predation cues: can sensory redundancy reduce the apparent impacts of elevated CO2 on fish? Ecology and Evolution, 3 (10). pp. 3565-3575.

Johansen, J.L., and Jones, G.P. (2013) Sediment-induced turbidity impairs foraging performance and prey choice of planktivorous coral reef fishes. Ecological Applications, 23 (6). pp. 1504-1517.

Scheffers, Brett R., Brunner, Rebecca M., Ramirez, Sara D., Shoo, Luke P., Diesmos, Arvin, and Williams, Stephen E. (2013) Thermal buffering of microhabitats is a critical factor mediating warming vulnerability of frogs in the Philippine biodiversity hotspot. Biotropica, 45 (5). pp. 628-635.

Buttner, Petra G., Westcott, David A., Maclean, Jennefer, Brown, Lawrence, McKeown, Adam, Johnson, Ashleigh, Wilson, Karen, Blair, David, Luly, Jonathan, Skerratt, Lee, Muller, Reinhold, and Speare, Richard (2013) Tick paralysis in spectacled flying-foxes (Pteropus conspicillatus) in North Queensland, Australia: impact of a ground-dwelling ectoparasite finding an arboreal host. PLoS ONE, 8 (9). pp. 1-10.

Laurance, William F. (2013) Tipping points and the vulnerability of Australia's tropical ecosystems. In: Sodhi, Navjot S., Gibson, Luke, and Raven, Peter H., (eds.) Conservation Biology: voices from the tropics. Wiley-Blackwell, Chichester, West Sussex, UK, pp. 169-180.

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Commons, Katherine H., Blake, Denise F., and Brown, Lawrence H. (2013) A prospective analysis of independent patient risk factors for middle ear barotrauma in a multiplace hyperbaric chamber. Diving and Hyperbaric Medicine, 43 (3). pp. 143-147.

Shaw, Emily C., Munday, Philip L., and McNeil, Ben I. (2013) The role of CO₂ variability and exposure time for biological impacts of ocean acidification. Geophysical Research Letters, 40 (17). pp. 4685-4688.

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Leduc, Antoine O.H.C., Munday, Philip L., Brown, Grant E., and Ferrari, Maud C.O, (2013) Effects of acidification on olfactory-mediated behaviour in freshwater and marine ecosystems: a synthesis. Philosophical Transactions of the Royal Society B: Biological Sciences, 368 (1627). pp. 1-14.

Cowman, Peter F., and Bellwood, David R. (2013) Vicariance across major marine biogeographic barriers: temporal concordance and the relative intensity of hard versus soft barriers. Proceedings of the Royal Society of London Series B, Biological Sciences, 280 (1768). pp. 1-8.

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Loughnan, Shannon R., Domingos, Jose A., Smith-Keune, Carolyn, Forrester, Justin P., Jerry, Dean R., Beheregaray, Luciano B., and Robinson, Nicholas A. (2013) Broodstock contribution after mass spawning and size grading in barramundi (Lates calcarifer, Bloch). Aquaculture, 404-405. pp. 139-149.

Capper, Angela, Flewelling, Leanne J., and Arthur, Karen (2013) Dietary exposure to harmful algal bloom (HAB) toxins in the endangered manatee (Trichechus manatus latirostris) and green sea turtle (Chelonia mydas) in Florida, USA. Harmful Algae, 28. pp. 1-9.

Munday, Philip L., Pratchett, Morgan S., Dixson, Danielle L., Donelson, Jennifer M., Endo, Geoff G.K., Reynolds, Adam D., and Knuckey, Richard (2013) Elevated CO2 affects the behavior of an ecologically and economically important coral reef fish. Marine Biology, 160 (8). pp. 2137-2144.

Perkins, T. Alex, Phillips, Benjamin L., Baskett, Marissa L., and Hastings, Alan (2013) Evolution of dispersal and life history interact to drive accelerating spread of an invasive species. Ecology Letters, 16 (8). pp. 1079-1087.

Devine, Brynn M., and Munday, Philip L. (2013) Habitat preferences of coral-associated fishes are altered by short-term exposure to elevated CO₂. Marine Biology, 160 (8). pp. 1955-1962.

Blowes, Shane A., Pratchett, Morgan S., and Connolly, Sean R. (2013) Heterospecific aggression and dominance in a guild of coral-feeding fishes: the roles of dietary ecology and phylogeny. American Naturalist, 182 (2). pp. 157-168.

Feild, Taylor S., and Brodribb, Timothy J. (2013) Hydraulic tuning of vein cell microstructure in the evolution of angiosperm venation networks. New Phytologist, 199 (3). pp. 720-726.

Richards, Zoe T., Syms, Craig, Wallace, Carden C., Muir, Paul R., and Willis, Bette L. (2013) Multiple occupancy–abundance patterns in staghorn coral communities. Diversity and Distributions, 19 (8). pp. 884-895.

Dielema, Wouter I. J., Venter, Michelle, Ramachandra, Anurag, Krockenberger, Andrew K., and Bird, Michael I. (2013) Soil carbon stocks vary predictably with altitude in tropical forests: implications for soil carbon storage. Geoderma, 204-205. pp. 59-67.

Hilmi, Nathalie, Allemand, Denis, Dupont, Sam, Safa, Alain, Haraldsson, Gunnar, Nunes, Paulo A.L.D., Moore, Chris, Hattam, Caroline, Reynaud, Stéphanie, Hall-Spencer, Jason M., Fine, Maoz, Turley, Carol, Jeffree, Ross, Orr, James, Munday, Philip L., and Cooley, Sarah R. (2013) Towards improved socio-economic assessments of ocean acidification's impacts. Marine Biology, 160 (8). pp. 1773-1787.

Goopy, J.P., deNys, R., Callaghan, M., and Parker, A. (2013) Vitamin A status of heifers fed a diet deficient in Beta Carotene. In: Proceedings of the Northern Beef Research Update Conference, p. 168. From: Northern Beef Research Update Conference , 12-15 August 2013, Cairns, QLD, Australia.

Yong, R.Q-Y., Cutmore, S.C., Miller, T.L., Adlard, R.D., and Cribb, T.H. (2013) The ghost of parasites past: eggs of the blood fluke Cardicola chaetodontis (Aporocotylidae) trapped in the heart and gills of butterflyfishes (Perciformes: Chaetodontidae) of the Great Barrier Reef. Parasitology, 140 (9). pp. 1186-1194.

Anderson, Alexander S., Storlie, Collin J., Shoo, Luke P., Pearson, Richard G., and Williams, Stephen E. (2013) Current analogues of future climate indicate the likely response of a sensitive montane tropical avifauna to a warming world. PLoS ONE, 8 (7). pp. 1-13.

Feary, David A., Burt, John A., Bauman, Andrew G., Al Hazeem, Shaker, Abdel-Moati, Mohamed A., Al-Khalifa, Khalifa A., Anderson, Donald M., Amos, Carl, Baker, Andrew, Bartholomew, Aaron, Bento, Rita, Cavalcante, Geórgenes H., Chen, Chaolun Allen, Coles, Steve L., Dab, Koosha, Fowler, Ashley M., George, David, Grandcourt, Edwin, Hill, Ross, John, David M., Jones, David A., Keshavmurthy, Shashank, Mahmoud, Huda, Tapeh, Mahdi Moradi Och, Mostafavi, Pargol Ghavam, Naser, Humood, Pichon, Michel, Purkis, Sam, Riegl, Bernhard, Samimi-Namin, Kaveh, Sheppard, Charles, Samiei, Jahangir Vajed, Voolstra, Christian R., and Wiedenmann, Joerg (2013) Critical research needs for identifying future changes in Gulf coral reef ecosystems. Marine Pollution Bulletin, 72 (2). pp. 406-416.

Stephens, Evan, de Nys, Rocky, Ross, Ian L., and Hankamer, Ben (2013) Algae fuels as an alternative to petroleum. Journal of Petroleum & Environmental Biotechnology, 4 (4). pp. 1-7.

Courtney, Robert, and Seymour, Jamie (2013) Seasonality in polyps of a tropical cubozoan: a latina nr mordens. PLoS ONE, 8 (7). pp. 1-6.

Leahy, Susannah M., Kingsford, Michael J., and Steinberg, Craig R. (2013) Do clouds save the Great Barrier Reef? Satellite imagery elucidates the cloud-SST relationship at the local scale. PLoS ONE, 8 (7). pp. 1-12.

Wen, Colin Kuo-Chang, Chen, Kao-Song, Hsieh, Hernyi Justin, Hsu, Chia-Min, and Chen, Chaolun Allen (2013) High coral cover and subsequent high fish richness on mature breakwaters in Taiwan. Marine Pollution Bulletin, 72 (1). pp. 55-63.

Warren, R., VanDerWal, J. , Price, J., Welbergen, J.A., Atkinson, I., Ramirez-Villegas, J., Osborn, T.J., Jarvis, A., Shoo, L.P., Williams, S.E., and Lowe, J. (2013) Quantifying the benefit of early climate change mitigation in avoiding biodiversity loss. Nature Climate Change, 3. pp. 678-682.

Bott, Nathan J., Miller, Terrence L., and Cribb, Thomas H. (2013) Bucephalidae (Platyhelminthes: Digenea) of Plectropomus (Serranidae: Epinephelinae) in the tropical Pacific. Parasitology Research, 112 (7). pp. 2561-2584.

Sharma, Kalpesh K., Garb, Sourabh, Li, Yan, Malekizadeh, Ali, and Schenk, Peer M. (2013) Critical analysis of current microalgae dewatering techniques. Biofuels, 4 (4). pp. 397-407.

Domingos, Jose A., Smith-Keune, Carolyn, Robinson, Nicholas, Loughnan, Shannon, Harrison, Paul, and Jerry, Dean R. (2013) Heritability of harvest growth traits and genotype–environment interactions in barramundi, Lates calcarifer (Bloch). Aquaculture, 402-403. pp. 66-75.

Shoo, Luke P., Hoffmann, Ary A., Garnett, Stephen, Pressey, Robert L., Williams, Yvette M., Taylor, Martin, Falconi, Lorena, Yates, Colin J., Scott, John K., Alagador, Diogo, and Williams, Stephen E. (2013) Making decisions to conserve species under climate change. Climatic Change, 119 (2). pp. 239-246.

Mitchell, Matthew D., and McCormick, Mark I. (2013) Ontogenetic differences in chemical alarm cue production determine antipredator responses and learned predator recognition. Behavioural Ecology and Sociobiology, 67 (7). pp. 1123-1129.

Howells, Emily J., Willis, Bette L., Bay, Line K., and van Oppen, Madeleine J.H. (2013) Spatial and temporal genetic structure of Symbiodinium populations within a common reef-building coral on the Great Barrier Reef. Molecular Ecology, 22 (14). pp. 3693-3708.

Hinze, A., Rymer, T., and Pillay, N. (2013) Spatial dichotomy of sociality in the African ice rat. Journal of Zoology, 290 (3). pp. 208-214.

Klein-Marcuschamer, Daniel, Turner, Christopher, Allen, Mark, Gray, Peter, Dietzgen, Ralf G., Gresshoff, Peter M., Hankamer, Ben, Heimann, Kirsten, Scott, Paul T., Stephens, Evans, Speight, Robert, and Nielsen, Lars K. (2013) Technoeconomic analysis of renewable aviation fuel from microalgae, Pongamia pinnata, and sugarcane. Biofuels Bioproducts & Biorefining, 7 (4). pp. 416-428.

Wardhaugh, Carl W., Edwards, Will, and Stork, Nigel E. (2013) Variation in beetle community structure across five microhabitats in Australian tropical rainforest trees. Insect Conservation and Diversity, 6 (4). pp. 463-472.

White, James R., Meekan, Mark G., McCormick, Mark I., and Ferrari, Maud C.O. (2013) A comparison of field measures of boldness and their relationships to survival in young fish. PLoS ONE, 8 (7). pp. 1-11.

Pujolar, J.M., Jacobsen, M.W., Frydenberg, J., Als, T.D., Larsen, P.F., Maes, G.E., Zane, L., Jian, J.B., Cheng, L., and Hansen, M.M. (2013) A resource of genome-wide single-nucleotide polymorphisms generated by RAD tag sequencing in the critically endangered European eel. Molecular Ecology Resources, 13 (4). pp. 706-714.

Underwood, Avril H., Taylor, Sandra, and Seymour, Jamie E. (2013) Range extension of the Cubozoan, Tripedalia binata Moore (Cnideria: Carybdeida: Carybdeidae) from far north Queensland, Australia. Memoirs of the Queensland Museum - Nature, 56 (2). pp. 607-614.

Mouritsen, Henrik, Atema, Jelle, Kingsford, Michael J., and Gerlach, Gabriele (2013) Sun compass orientation helps coral reef fish larvae return to their natal reef. PLoS ONE, 8 (6). pp. 1-16.

Meyer, Edward A., Hines, Harry B., Hoskin, Conrad J., and McDonald, Keith R. (2013) The tadpole of the Melville Range Treefrog Litoria andiirrmalin (Anura: Hylidae). Zootaxa, 3670 (3). pp. 396-398.

Galaiduk, Ronen, Figueira, Will F., Kingsford, Michael J., and Curley, Belinda G. (2013) Factors driving the biogeographic distribution of two temperate Australian damselfishes and ramifications for range shifts. Marine Ecology Progress Series, 484. pp. 189-202.

Petersen, Elizabeth H., Jones, Clive, and Priyambodo, Bayu (2013) Bioeconomics of spiny lobster farming in Indonesia. Asian Journal of Agriculture and Development, 10 (1). pp. 25-39.

Sadovy de Mitcheson, Yvonne, Craig, Matthew T., Bertoncini, Athila A., Carpenter, Kent E., Cheung, William W.L., Choat, John H., Cornish, Andrew S., Fennessy, Sean T., Ferreira, Beatrice, Heemstra, Philip C., Liu, Min, Myers, Robert F., Pollard, David A., Rhodes, Kevin L., Rocha, Luiz A., Russell, Barry C., Samoilys, Melita A., and Sanciangco, Jonnell (2013) Fishing groupers towards extinction: a global assessment of threats and extinction risks in a billion dollar fishery. Fish and Fisheries, 14 (2). pp. 119-136.

van der Meer, Martin H., Gardner, Michael G., Berumen, Michael L., Hobbs, Jean-Paul A., and Van Herwerden, Lynne (2013) Identification of seventeen microsatellite loci for conservation genetic studies of the endemic wrasse Coris bulbifrons. Conservation Genetics Resources, 5 (2). pp. 363-366.

McMahon, Kathryn, Collier, Catherine, and Lavery, Paul S. (2013) Identifying robust bioindicators of light stress in seagrasses: a meta-analysis. Ecological Indicators, 30. pp. 7-15.

van der Meer, Martin H., Horne, John B., Gardner, Michael G., Hobbs, Jean-Paul A., Pratchett, Morgan, and van Herwerden, Lynne (2013) Limited contemporary gene flow and high self-replenishment drives peripheral isolation in an endemic coral reef fish. Ecology and Evolution, 3 (6). pp. 1653-1666.

Brandl, S.J., and Bellwood, D.R. (2013) Pair formation in the herbivorous rabbitfish Siganus doliatus. Journal of Fish Biology, 82 (6). pp. 2031-2044.

Brooker, Rohan M., Jones, Geoffrey P., and Munday, Philip L. (2013) Prey selectivity affects reproductive success of a corallivorous reef fish. Oecologia, 172 (2). pp. 409-416.

Monadjem, Ara, Virani, Munir Z., Jackson, Colin, and Reside, April (2013) Rapid decline and shift in the future distribution predicted for the endangered Sokoke Scops Owl Otus ireneae due to climate change. Bird Conservation International, 23 (2). pp. 247-258.

Graham, E.M., Baird, A.H., Connolly, S.R., Sewell, M.A., and Willis, B.L. (2013) Rapid declines in metabolism explain extended coral larval longevity. Coral Reefs, 32 (2). pp. 539-549.

Wenger, A.S., McCormick, M.I., McLeod, I.M., and Jones, G.P. (2013) Suspended sediment alters predator–prey interactions between two coral reef fishes. Coral Reefs, 32 (2). pp. 369-374.

Kramer, M.J., Bellwood, O., and Bellwood, D.R. (2013) The trophic importance of algal turfs for coral reef fishes: the crustacean link. Coral Reefs, 32 (2). pp. 575-583.

Mouillot, David, Bellwood, David R., Baraloto, Christopher, Chave, Jerome, Galzin, Rene, Harmelin-Vivien, Mireille, Kulbicki, Michel, Lavergne, Sebastien, Lavorel, Sandra, Mouquet, Nicolas, Paine, C.E. Timothy, Renaud, Julien, and Thuiller, Wilfried (2013) Rare species support vulnerable functions in high-diversity ecosystems. PLoS Biology, 11 (5). pp. 1-11.

Couper, Patrick, and Hoskin, Conrad (2013) Two new subspecies of the leaf-tailed gecko Phyllurus ossa (Lacertilia: Carphodactylidae) from mid-eastern Queensland, Australia. Zootaxa, 3664 (4). pp. 537-553.

Lawton, Rebecca J., de Nys, Rocky, and Paul, Nicholas (2013) Selecting reliable and robust freshwater macroalgae for biomass applications. PLoS ONE, 8 (5). pp. 1-7.

Hoskin, Conrad J., Hines, Harry B., Meyer, Ed, Clarke, John, and Cunningham, Michael (2013) A new treefrog (Hylidae: Litoria) from Kroombit Tops, east Australia, and an assessment of conservation status. Zootaxa, 3646 (4). pp. 426-446.

Garside, A.L. (2013) Review of Productivity Trends in the Herbert Sugarcane Growing Region. Report. Herbert Cane Productivity Services, Townsville, Queensland.

Wenger, Amelia S., and McCormick, Mark I. (2013) Determining trigger values of suspended sediment for behavioral changes in a coral reef fish. Marine Pollution Bulletin, 70 (1-2). pp. 73-80.

Tapiolas, Dianne M., Raina, Jean-Baptiste, Lutz, Adrian, Willis, Bette L., and Motti, Cherie A. (2013) Direct measurement of dimethylsulfoniopropionate (DMSP) in reef-building corals using quantitative nuclear magnetic resonance (qNMR) spectroscopy. Journal of Experimental Marine Biology and Ecology, 443. pp. 85-89.

Laurance, William F. (2013) Does research help to safeguard protected areas? Trends in Ecology & Evolution, 28 (5). pp. 261-266.

Howells, Emily J., Berkelmans, Ray, van Oppen, Madeleine J.H., Willis, Bette L., and Bay, Line K. (2013) Historical thermal regimes define limits to coral acclimatization. Ecology, 94 (5). pp. 1078-1088.

Coppock, Amy G., Gardiner, Naomi M., and Jones, Geoffrey P. (2013) Olfactory discrimination in juvenile coral reef fishes: response to conspecifics and corals. Journal of Experimental Marine Biology and Ecology, 443. pp. 21-26.

Fuentes, Marianna M.P.B., Pike, David A., Dimatteo, Andrew, and Wallace, Bryan P. (2013) Resilience of marine turtle regional management units to climate change. Global Change Biology, 19 (5). pp. 1399-1406.

von Alvensleben, Nicolas, Stookey, Katherine, Magnusson, Marie, and Heimann, Kirsten (2013) Salinity tolerance of Picochlorum atomus and the use of salinity for contamination control by the freshwater cyanobacterium Pseudanabaena limnetica. PLoS ONE, 8 (5). pp. 1-12.

Wardhaugh, Carl W., Stork, Nigel E., and Edwards, Will (2013) Specialization of rainforest canopy beetles to host trees and microhabitats: not all specialists are leaf-feeding herbivores. Biological Journal of the Linnean Society, 109 (1). pp. 215-228.

Woodcock, Paul, Edwards, David P., Newton, Rob J., Khen, Chey Vun, Bottrell, Simon H., and Hamer, Keith C. (2013) Impacts of intensive logging on the trophic organisation of ant communities in a biodiversity hotspot. PLoS ONE, 8 (4). pp. 1-7.

Almany, Glenn R., Hamilton, Richard J., Bode, Michael, Matawai, Manuai, Potuku, Tapas, Saenz-Agudelo, Pablo, Planes, Serge, Berumen, Michael L., Rhodes, Kevin L., Thorrold, Simon R., Russ, Garry R., and Jones, Geoffrey P. (2013) Dispersal of grouper larvae drives local resource sharing in a coral reef fishery. Current Biology, 23 (7). pp. 626-630.

Elzer, Amanda L., Pike, David A., Webb, Jonathan K., Hammill, Kate, Bradstock, Ross A., and Shine, Richard (2013) Forest-fire regimes affect thermoregulatory opportunities for terrestrial ectotherms. Austral Ecology, 38 (2). pp. 190-198.

Mitchell, Matthew D., McCormick, Mark I., Chivers, Douglas P., and Ferrari, Maud C.O. (2013) Generalization of learned predator recognition in coral reef ecosystems: how cautious are damselfish? Functional Ecology, 27 (2). pp. 299-304.

Edwards, Felicity A., Edwards, David P., Hamer, Keith C., and Davies, Richard G. (2013) Impacts of logging and conversion of rainforest to oil palm on the functional diversity of birds in Sundaland. Ibis, 155 (2). pp. 313-326.

Rhodes, K.L., Taylor, B.M., Wichilmel, C.B., Joseph, E., Hamilton, R.J., and Almany, G.R. (2013) Reproductive biology of squaretail coralgrouper Plectropomus areolatus using age-based techniques. Journal of Fish Biology, 82 (4). pp. 1333-1350.

Roy, Alexandra-Sophie, Frisch, Ashley J., Syms, Craig, Thorrold, Simon R., and Jones, Geoffrey P. (2013) Retention of a transgenerational marker (137Barium) in tissues of adult female anemonefish and assessment of physiological stress. Environmental Biology of Fishes, 96 (4). pp. 459-466.

Manassa, R.P., and McCormick, M.I. (2013) Social learning improves survivorship at a life-history transition. Oecologia, 171 (4). pp. 845-852.

Pratchett, M.S., Graham, N.A.J., and Cole, A.J. (2013) Specialist corallivores dominate butterflyfish assemblages in coral-dominated reef habitats. Journal of Fish Biology, 82 (4). pp. 1177-1191.

Venter, Oscar, Possingham, Hugh P., Hovani, Lex, Dewi, Sonya, Griscom, Bronson, Paoli, Gary, Wells, Phillip, and Wilson, Kerrie A. (2013) Using systematic conservation planning to minimize REDD+ conflict with agriculture and logging in the tropics. Conservation Letters, 6 (2). pp. 116-124.

Koichi, Kana, Cottrell, Alison, K. Sangha, Kamalijit, and Gordon, Iain J. (2013) What determines the acceptability of wildlife control methods? A case study of feral pig management in the Wet Tropics World Heritage Area, Australia. Human Dimensions of Wildlife, 18 (2). pp. 97-108.

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Hair, Cathy A., Pickering, Timothy D., and Mills, David J. (2012) Asia-Pacific Tropical Sea Cucumber Aquaculture: proceedings of an International Symposium held in Noumea, New Caledonia, 15-17 February, 2011. In: ACIAR Proceedings (136), pp. 1-209. From: Asia–Pacific Tropical Sea Cucumber Aquaculture, 15-17 February 2011, Noumea, New Caledonia.

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Fraser, M.R., and de Nys, R. (2011) A quantitative determination of deformities in barramundi (Lates calcarifer; Bloch) fed a vitamin deficient diet. Aquaculture Nutrition, 17 (3). pp. 235-243.

Hadfield, Kerry A., Bruce, Niel, and Smit, Nico J. (2011) Cymothoa hermani sp. nov. (Isopoda, Cymothoidae, Crustacea), a parasitic isopod, collected off the Zanzibar coast, Tanzania from the mouth of a parrotfish (Scaridae). Zootaxa, 2876. pp. 57-68.

Leis, Jeffrey, Siebeck, Ulrike, and Dixson, Danielle (2011) How Nemo finds home: the neuroecology of dispersal and of population connectivity in larvae of marine fishes. Integrative and Comparative Biology, 51 (5). pp. 826-843.

Pisani, Michelle J., Fromm, Phillip D., Mulyana, Yanyan, Clarke, Ronald J., Körner, Heinrich, Heimann, Kirsten, Collins, J. Grant, and Keene, F. Richard (2011) Mechanism of Cytotoxicity and Cellular Uptake of Lipophilic Inert Dinuclear Polypyridylruthenium(II) Complexes. ChemMedChem, 6 (5). pp. 848-858.

Laurance, William F., Dell, Bernard, Turton, Stephen M., Lawes, Michael J., Hutley, Lindsay B., McCallum, Hamish, Dale, Patricia, Bird, Michael, Hardy, Giles, Prideaux, Gavin, Gawne, Ben, McMahon, Clive R., Yu, Richard, Hero, Jean-Marc, Schwarzkopf, Lin, Krockenberger, Andrew, Setterfield, Samantha A., Douglas, Michael, Silvester, Ewen, Mahony, Michael, Vella, Karen, Saikia, Udoy, Wahren, Carl-Henrik, Xu, Zhihong, Smith, Bradley, and Cocklin, Chris (2011) The 10 Australian ecosystems most vulnerable to tipping points. Biological Conservation, 144 (5). pp. 1472-1480.

Salter, B., Garside, Alan, Berding, N., Perna, J., and Park, G. (2011) Are genotype by row configuration interactions of consequence in cultivar development for wide row production? Proceedings of the Australian Society of Sugar Cane Technologists, 33. pp. 1-9.

Qian, Zeng-Qiang, Ceccarelli, F. Sara, Carew, Melissa E., Schlüns, Helge, Schlick-Steiner, Birgit C., and Steiner, Florian M. (2011) Characterization of polymorphic microsatellites in the giant bulldog ant, Myrmecia brevinoda and the jumper ant, M. pilosula. Journal of Insect Science, 11 (71). pp. 1-8.

Sotje, I, Neues, F, Epple, M, Ludwig, W, Rack, A, Gordon, Matthew, Boese, R, and Tiemann, H (2011) Comparison of the statolith structures of Chironex fleckeri (Cnidaria, Cubozoa) and Periphylla periphylla (Cnidaria, Scyphozoa): a phylogenetic approach. Marine Biology, 158 (5). pp. 1149-1161.

Beattie, Andrew J., Hay, Mark, Magnusson, Bill, de Nys, Rocky, Smeathers, James, and Vincent, Julian F.V. (2011) Ecology and bioprospecting. Austral Ecology, 36 (3). pp. 341-356.

Schlüns, Helge, Moreau, Corrie S., Zettel, Herbert, and Schlick-Steiner, Birgit C. (2011) Editorial for the Ross H. Crozier memorial volume. Myrmecological News, 15. pp. 3-4.

Rader, Romina, Edwards, Will, Westcott, David A., Cunningham, Saul A., and Howlett, Bradley G. (2011) Pollen transport differs among bees and flies in a human-modified landscape. Diversity and Distributions, 17 (3). pp. 519-529.

Barnett, Adam, Abrantes, Kátya G., Stevens, John D., and Semmens, Jayson M. (2011) Site fidelity and sex-specific migration in a mobile apex predator: implications for conservation and ecosystem dynamics. Animal Behaviour, 81 (5). pp. 1039-1048.

Miller, David A., Choat, John Howard, Clements, Kendall D., and Angert, Esther R. (2011) The spoIIE homolog of Epulopiscium sp. type B is expressed early in intracellular offspring development. Journal of Bacteriology, 193 (10). pp. 2642-2646.

Shine, Richard, Brown, Gregory P., and Phillips, Benjamin L. (2011) An evolutionary process that assembles phenotypes through space rather than through time. Proceedings of the National Academy of Sciences of the United States of America, 108 (14). pp. 5708-5711.

Donelson, Jennifer M., Munday, Philip, Mccormick, Mark I., and Nilsson, Göran E. (2011) Acclimation to predicted ocean warming through developmental plasticity in a tropical reef fish. Global Change Biology, 17 (4). pp. 1712-1719.

Webster, Nicole S., Cobb, Rose E., Soo, Rochelle, Anthony, Shelley L., Battershill, Christopher N., Whalan, Stephen, and Evans-Illidge, Elizabeth (2011) Bacterial community dynamics in the marine sponge Rhopaloeides odorabile under in situ and ex situ cultivation. Marine Biotechnology, 13 (2). pp. 296-304.

Shoo, Luke P., Olson, Deanna H., McMenamin, Sarah K., Murray, Kris A., Van Sluys, Monique, Donnelly, Maureen A., Stratford, Danial, Terhivuo, Juhan, Merino-Viteri, Andres, Herbert, Sarah M., Bishop, Phillip J., Corn, Paul Stephen, Dovey, Liz, Griffiths, Richard A., Lowe, Katrin, Mahony, Michael, McCullum, Hamish, Shuker, Jonathan D., Simpkins, Clay, Skerratt, Lee F., Williams, Stephen E., and Hero, Jean-Marc (2011) Engineering a future for amphibians under climate change. Journal of Applied Ecology, 48 (2). pp. 487-492.

Vickers, Mathew, Manicom, Carryn, and Schwarzkopf, Lin (2011) Extending the cost-benefit model of thermoregulation: high-temperature environments. American Naturalist, 177 (4). pp. 452-461.

Le Vay, Lewis, Shelley, Colin, Zeng, Chaoshu, and Sorgeloos, Patrick (2011) International symposium on aquaculture, biology and management of commercially important crabs, Shanghai (China), 8–11 November 2009 (ISABMC-2009). Aquaculture International, 19 (2). pp. 215-216.

Waycott, Michelle, Jones, Brendan L., Van Dijk, Jent Kornelis, Robson, Heather L.A., and Calladine, Ainsley (2011) Microsatellite markers in the Australian desert plant, Solanum centrale (Solanaceae). American Journal of Botany, 98 (4). e81-e83.

Woodhams, Douglas C., Bosch, Jaime, Briggs, Cheryl J., Cashins, Scott, Davis, Leyla R., Lauer, Antje, Muths, Erin, Puschendorf, Robert, Schmidt, Benedikt R., Sheafor, Brandon, and Voyles, Jamie (2011) Mitigating amphibian disease: strategies to maintain wild populations and control chytridiomycosis. Frontiers in Zoology, 8 (1). pp. 1-23.

De Santis, Christian, Smith-Keune, Carolyn, and Jerry, Dean R. (2011) Normalizing RT-qPCR data: are we getting the right answers? An appraisal of normalization approaches and internal reference genes from a case study in the Finfish Lates calcarifer. Marine Biotechnology, 13 (2). pp. 170-180.

Laurance, William F., Kakul, Titus, Keenan, Rodney J., Sayer, Jeffrey, Passingan, Simon, Clements, Gopalasamy R., Villegas, Felipe, and Sodhi, Navjot S. (2011) Predatory corporations, failing governance, and the fate of forests in Papua New Guinea. Conservation Letters, 4 (2). pp. 95-100.

Dickens, Luke C., Goatley, Christopher H.R., Tanner, Jennifer K., and Bellwood, David R. (2011) Quantifying relative diver effects in underwater visual censuses. PLoS One, 6 (4). pp. 1-8.

Milione, Michael, Saucedo, Pedro, and Southgate, Paul (2011) Sexual development, sex ratio and morphometrics of Pteria penguin (Bivalvia: Pteriidae), in north-eastern Australia. Molluscan Research, 31 (1). pp. 30-36.

Zhao, Guang-Hui, Blair, David, Li, Xiao-Yan, Li, Juan, Lin, Rui-Qing, Zou, Feng-Cai, Sugiyama, Hiromu, Mo, Xi-Hao, Yuan, Zi-Guo, Song, Hui-Qun, and Zhu, Xing-Quan (2011) The ribosomal intergenic spacer (IGS) region in Schistosoma japonicum: Structure and comparisons with related species. Infection, Genetics and Evolution, 11 (3). pp. 610-617.

De Santis, C., and Jerry, D.R. (2011) Differential tissue-regulation of myostatin genes in the teleost fish Lates calcarifer in response to fasting. Evidence for functional differentiation. Molecular and Cellular Endocrinology, 335 (2). 158-165 .

Bennett, S., and Bellwood, D.R. (2011) Latitudinal variation in macroalgal consumption by fishes on the Great Barrier Reef. Marine Ecology Progress Series, 426. pp. 241-252.

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Bruce, Niel L., and Sidabalok, Conni (2011) The genus Lanocira Hansen, 1890 (Corallanidae: Isopoda: Crustacea)in tropical Australian waters. Zootaxa, 2793. pp. 23-34.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Kingsford, Michael, Smith, Felicity, and Flood, M.J. (2011) Growth and pelagic larval duration of presettlement and newly settled neon damselfish, Pomacentrus coelestis, at multiple spatial scales. Coral Reefs, 30 (1). pp. 203-214.

Van Hennekeler, K., Jones, R. E., Skerratt, L. F., Muzari, M. O., and Fitzpatrick, L. A. (2011) Meteorological effects on the daily activity patterns of tabanid biting flies in northern Queensland, Australia. Medical and Veterinary Entomology, 25 (1). pp. 17-24.

Bonaldo, R.M., and Bellwood, D.R. (2011) Parrotfish predation on massive Porites on the Great Barrier Reef. Coral Reefs, 30 (1). pp. 259-269.

Le Grand, Helen M, and Fabricius, Katharina (2011) Relationship of internal macrobioeroder densities in living massive Porites to turbidity and chlorophyll on the Australian Great Barrier Reef. Coral Reefs, 30 (1). pp. 97-107.

Trip, E.D.L., Clements, K.D., Raubenheimer, D., and Choat, J.H. (2011) Reproductive biology of an odacine labrid, Odax pullus. Journal of Fish Biology, 78 (3). pp. 741-761.

Holmes, Thomas H., and McCormick, Mark I. (2011) Response across a gradient: behavioural reactions of newly settled fish to predation cues. Animal Behaviour, 81 (3). pp. 543-550.

Hoey, Andrew S., and Bellwood, David R. (2011) Suppression of herbivory by macroalgal density: a critical feedback on coral reefs? Ecology Letters, 14 (3). pp. 267-273.

Brook, L.A., and Kutt, A.S. (2011) The diet of the dingo (Canis lupus dingo) in north-eastern Australia with comments on its conservation implications. The Rangeland Journal, 33 (1). pp. 79-85.

Aeby, Greta S., Williams, Gareth J., Franklin, Erik C., Haapkyla, Jessica, Harvell, C. Drew, Neale, Stephen, Page, Cathie A., Raymundo, Laurie, Vargas-Ángel, Bernardo, Willis, Bette L., Work, Thierry M., and Davy, Simon K. (2011) Growth anomalies on the coral genera Acropora and Porites are strongly associated with host density and human population size across the Indo-Pacific. PLoS ONE, 6 (2). pp. 1-9.

Bannister, Raymond, Hoogenboom, Mia, Anthony, Kenneth R. N., Battershill, Chris, Whalan, Stephen, Webster, Nicole, and De Nys, Rocky (2011) Incongruence between the distribution of a common coral reef sponge and photosynthesis. Marine Ecology Progress Series, 423. pp. 95-100.

Munday, Philip L., Gagliano, Monica, Donelson, Jennifer M., Dixson, Danielle, and Thorrold, Simon (2011) Ocean acidification does not affect the early life history development of a tropical marine fish. Marine Ecology Progress Series, 423. pp. 211-221.

Haapkylä, Jessica, Unsworth, Richard K.F., Flavell, Mike, Bourne, David G., Schaffelke, Britta, and Willis, Bette L. (2011) Seasonal rainfall and runoff promote coral disease on an inshore reef. PLoS ONE, 6 (2). pp. 1-10.

Xiao, Ning, Remais, Justin, Brindley, Paul J., Qui, Dongchuan, Spear, Robert, Lei, Yang, and Blair, David (2011) Polymorphic microsatellites in the human bloodfluke, Schistosoma japonicum, identified using a genomic resource. Parasites & Vectors, 4. pp. 1-4.

Shaddick, Kim, Gilligan, Dean M., Burridge, Christopher P., Jerry, Dean R., Truong, Kiet, and Beheregaray, Luciano B. (2011) Historic divergence with contemporary connectivity in a catadromous fish, the estuary perch (Macquaria colonorum). Canadian Journal of Fisheries and Aquatic Sciences, 68 (2). pp. 304-318.

Schwanz, Lisa E., Voordouw, Maarten J., Brisson, Dustin, and Ostfeld, Richard S. (2011) Borrelia burgdorferi has minimal impact on the lyme disease reservoir host Peromyscus leucopus. Vector-Borne and Zoonotic Diseases, 11 (2). pp. 117-124.

Holtum, Joseph A.M., Chambers, Don, Morgan, Terry, and Tan, Daniel K.Y. (2011) Agave as a biofuel feedstock in Australia. GCB Bioenergy, 3 (1). pp. 58-67.

Murray, Kris A., Retallick, Richard W.R., Puschendorf, Robert, Skerratt, Lee F., Rosauer, Dan, McCallum, Hamish I., Berger, Lee, Speare, Rick, and VanDerWal, Jeremy (2011) Assessing spatial patterns of disease risk to biodiversity: implications for the management of the amphibian pathogen, Batrachochytrium dendrobatidis. Journal of Applied Ecology, 48 (1). pp. 163-173.

Wu, Xugan, Wang, Zongkai, Cheng, Yong Xu, Zeng, Chaoshu, Yang, Xiaozhen, and Lu, Jianfeng (2011) Effects of dietary phospholipids and highly unsaturated fatty acids on the precocity, survival, growth and hepatic lipid composition of juvenile Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 457-468.

Hasbi, Ghitarina, de Nys, Rocky, Burns, Kathryn, Whalan, Stephen, and Dunlap, Walter C. (2011) Hepatic coenzyme Q redox balance of fishes as a potential bioindicator of environmental contamination by polycyclic aromatic hydrocarbons. Biology Letters, 7 (1). pp. 123-126.

Murray, Kris A., Retallick, Richard W.R., Puschendorf, Robert, Skerratt, Lee F., Rosauer, Dan, McCallum, Hamish I., Berger, Lee, Speare, Richard, and VanDerWal, Jeremy (2011) Issues with modelling the current and future distribution of invasive pathogens. Journal of Applied Ecology, 48 (1). pp. 177-180.

Liu, Zhijun, Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, and Yang, Xiaozhen (2011) Ovarian re-maturation following the first spawning in the Chinese mitten crab, Eriocheir sinensis (H. Milne-Edwards). Aquaculture Research, 42 (3). pp. 417-426.

Bonaldo, R.M., Krajewski, P.J., and Bellwood, D.R. (2011) Relative impact of parrotfish grazing scars on massive Porites corals at Lizard Island, Great Barrier Reef. Marine Ecology Progress Series, 423. pp. 223-233.

Veilleux, Heather D., van Herwerden, Lynne, Evans, Richard D. , Travers, Michael J. , and Newman, Stephen J. (2011) Strong genetic subdivision generates high genetic variability among eastern and western Australian populations of Lutjanus carponotatus (Richardson). Fisheries Research, 108 (1). pp. 74-80.

Gagliano, M., Lema, A.K., Depczynski, M., and Whalan, S. (2011) Use it and lose it: lipofuscin accumulation in the midbrain of a coral reef fish. Journal of Fish Biology, 78 (2). pp. 659-666.

Stoeckl, Natalie, Hicks, Christina C., Mills, Morena, Fabricius, Katharina, Esparon, Michelle, Kroon, Frederieke, Kaur, Kamaljit, and Costanza, Robert (2011) The economic value of ecosystem services in the Great Barrier Reef: our state of knowledge. Annals of the New York Academy of Sciences, 1219. pp. 113-133.

Davis, Sarah C., Griffiths, Howard, Holtum, Joseph, Saavedra, Alfonso Larqué, and Long, Stephen P. (2011) The evaluation of feedstocks in GCBB continues with a special issue on Agave for bioenergy. GCB Bioenergy, 3 (1). pp. 1-3.

Colloff, Matthew J., and Cairns, Andi (2011) A novel association between oribatid mites and leafy liverworts (Marchantiophyta: Jungermanniidae), with a description of a new species of Birobates Balogh, 1970 (Acari: Oribatida: Oripodidae). Australian Journal of Entomology, 50 (1). pp. 72-77.

McKinna, Lachlan I.W., Furnas, Miles J., and Ridd, Peter V. (2011) A simple, binary classification algorithm for the detection of Trichodesmium spp. within the Great Barrier Reef using MODIS imagery. Limnology and Oceanography: Methods, 9. pp. 50-66.

James, A.T., and Lawn, R.J. (2011) Application of physiological understanding in soybean improvement. II. Broadening phenological adaptation across regions and sowing dates. Crop & Pasture Science, 62 (1). pp. 12-24.

Horne, John B., Van Herwerden, Lynne, and Choat, J. Howard (2011) Just because the shoe fits doesn't mean you should wear it: complex evolutionary patterns in the reef fish genus Naso. In: Abstracts from Society for Integrative and Comparative Biology Annual Meeting, p. 1. From: Society for Integrative and Comparative Biology Annual Meeting, 3-7 January 2011, Salt Lake City, UT, USA.

Gusmão, Luiz Felipe Mendes, and Mckinnon, A. David (2011) Nucleic acid indices of egg production in the tropical copepod Acartia sinjiensis. Journal of Experimental Marine Biology and Ecology, 396 (2). pp. 122-137.

Schwanz, Lisa, Warner, Daniel A., McGaugh, Suzanne, Di Terlizzi, Roberta, and Bronikowski, Anne (2011) State-dependent physiological maintenance in a long-lived ectotherm, the painted turtle (Chrysemys picta). Journal of Experimental Biology, 214 (1). pp. 88-97.

Llewelyn, John, Phillips, Ben L., Brown, Greg P., Schwarzkopf, Lin, Alford, Ross A., and Shine, Richard (2011) Adaptation or preadaptation: why are keelback snakes (Tropidonophis mairii) less vulnerable to invasive cane toads (Bufo marinus) than are other Australian snakes? Evolutionary Ecology, 25 (1). pp. 13-24.

Bird, Michael I., Wurster, Christopher M., de Paula Silva, Pedro H., Bass, Adrian M., and de Nys, Rocky (2011) Algal biochar: production and properties. Bioresource Technology, 102 (2). 1886- 1891.

Lawn, R.J., and James, A.T. (2011) Application of physiological understanding in soybean improvement. I. Understanding phenological constraints to adaptation and yield potential. Crop & Pasture Science, 62 (1). pp. 1-11.

Mitchell, Matthew D., McCormick, Mark I., Ferrari, Maud C.O., and Chivers, Douglas P. (2011) Coral reef fish rapidly learn to identify multiple unknown predators upon recruitment to the reef. PLoS ONE, 6 (1). pp. 1-6.

Robert, Kylie A., and Schwanz, Lisa E. (2011) Emerging sex allocation research in mammals: marsupials and the pouch advantage. Mammal Review, 41 (1). pp. 1-22.

Russ, Garry R., and Alcala, Angel C. (2011) Enhanced biodiversity beyond marine reserve boundaries: the cup spillith over. Ecological Applications, 21 (1). pp. 241-250.

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Schwanz, Lisa E., Brisson, Dustin, Gomes-Solecki, Maria, and Ostfeld, Richard S. (2011) Linking disease and community ecology through behavioural indicators: immunochallenge of white-footed mice and its ecological impacts. Journal of Animal Ecology, 80 (1). pp. 204-214.

Scardino, Andrew J., and de Nys, Rocky (2011) Mini review: biomimetic models and bioinspired surfaces for fouling control. Biofouling, 27 (1). pp. 73-86.

Wedding, Brett B., White, Ronald D., Grauf, Steve, Wright, Carole, Tilse, Bonnie, Hofman, Peter, and Gadek, Paul A. (2011) Non-destructive prediction of 'Hass' avocado dry matter via FT-NIR spectroscopy. Journal of the Science of Food and Agriculture, 91 (2). pp. 233-238.

Pike, David A., Webb, Jonathan K., and Shine, Richard (2011) Removing forest canopy cover restores a reptile assemblage. Ecological Applications, 21 (1). pp. 274-280.

Hutson, K.S., Brock, E.L., and Steer, M.A. (2011) Spatial variation in parasite abundance: evidence of geographical population structuring in southern garfish Hyporhamphus melanochir. Journal of Fish Biology, 78 (1). pp. 166-182.

Shoo, Luke P., Storlie, Collin, VanDerWal, Jeremy, Little, Jeremy, and Williams, Stephen E. (2011) Targeted protection and restoration to conserve tropical biodiversity in a warming world. Global Change Biology, 17 (1). pp. 186-193.

Davis, A.M., Pearson, R.G., Pusey, B.J., Perna, C., Morgan, D.L., and Burrows, D. (2011) Trophic ecology of northern Australia's terapontids: ontogenetic dietary shifts and feeding classification. Journal of Fish Biology, 78 (1). pp. 265-286.

S-H Peh, Kelvin, Soh, Malcolm C.K., Sodhi, Navjot S., Laurance, William F., Ong, Dylan Jefri, and Clements, Gopalsamy Reuben (2011) Up in the clouds: is sustainable use of tropical montane cloud forests possible in Malaysia? BioScience, 61 (1). pp. 27-38.

Pintor, Anna F.V., Winter, Kelly L., Krockenberger, Andrew K., and Seymour, Jamie E. (2011) Venom physiology and composition in a litter of Common Death Adders (Acanthophis antarcticus) and their parents. Toxicon, 57 (1). pp. 68-75.

Laurance, William F., Camargo, José L.C., Luizão, Regina C.C., Laurance, Susan G., Pimm, Stuart L., Bruna, Emilio M., Stouffer, Philip C., Williamson, G. Bruce, Benitez-Malvido, Julieta, Vasconcelos, Heraldo L., Van Houtan, Kyle S., Zartman, Charles E., Boyle, Sarah A., Didham, Raphael K., Andrade, Ana, and Lovejoy, Thomas E. (2011) The fate of Amazonian forest fragments: a 32-year investigation. Biological Conservation, 144 (1). pp. 56-67.

Catalano, Sarah R., Hutson, Kate S., Ratcliff, Rodney M., and Whittington, Ian D. (2011) The value of host and parasite identification for arripid fish. Marine and Freshwater Research, 62 (1). pp. 72-82.

Gaynor, L.G., Lawn, R.J., and James, A.T. (2011) Agronomic studies on irrigated soybean in southern New South Wales. I. Phenological adaptation of genotypes to sowing date. Crop & Pasture Science, 62 (12). pp. 1056-1066.

Burt, John A., Feary, David A., Bauman, Andrew G., Usseglio, Paolo, Cavalcante, Georgenes H., and Sale, Peter F. (2011) Biogeographic patterns of reef fish community structure in the northeastern Arabian Peninsula. ICES Journal of Marine Science, 68 (9). pp. 1875-1883.

Howlett, B.G., Walker, M.K., Rader, R., Butler, R.C., Newstrom-Lloyd, L.E., and Teulon, D.A.J. (2011) Can insect body pollen counts be used to estimate pollen deposition on pak choi stigmas? New Zealand Plant Protection, 64. pp. 25-31.

Wild, Christian, Hoegh-Guldberg, Ove, Naumann, Malik S., Colombo-Pallotta, M. Florencia, Ateweberhan, Mebrahtu, Fitt, William K., Iglesias-Prieto, Roberto, Palmer, Caroline, Bythell, John C., Ortiz, Juan-Carlos, Loya, Yossi, and van Woesik, Robert (2011) Climate change impedes scleractinian corals as primary reef ecosystem engineers. Marine and Freshwater Research, 62 (2). pp. 205-215.

Bateman, Brooke L., Abell-Davis, Sandra E., and Johnson, Christopher N. (2011) Climate-driven variation in food availability between the core and range edge of the endangered northern bettong (Bettongia tropica). Australian Journal of Zoology, 59 (3). pp. 177-185.

Thaenkham, Urusa, Nawa, Yukifumi, Blair, David, and Pakdee, Wallop (2011) Confirmation of the paraphyletic relationship between families Opisthorchiidae and Heterophyidae using small and large subunit ribosomal DNA sequences. Parasitology International, 60 (4). pp. 521-523.

Bonin, Mary C., Almany, Glenn R., and Jones, Geoffrey P. (2011) Contrasting effects of habitat loss and fragmentation on coral-associated reef fishes. Ecology, 92 (7). pp. 1503-1512.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2011) Detrimental effects of host anemone bleaching on anemonefish populations. Coral Reefs, 30 (2). pp. 497-506.

Winter, Klaus, Garcia, Milton, and Holtum, Joseph A.M. (2011) Drought-stress-induced up-regulation of CAM in seedlings of a tropical cactus, Opuntia elatior, operating predominantly in the C3 mode. Journal of Experimental Botany, 62 (11). 4037-4042 .

Januchowski-Hartley, Stephanie, VanDerWal, Jeremy, and Sydes, Damon (2011) Effective control of aquatic invasive species in tropical Australia. Environmental Management, 48 (3). pp. 568-576.

Ballagh, D.A., Pankhurst, P.M., and Fielder, D.S. (2011) Embryonic development of mulloway, Argyrosomus japonicus, and egg surface disinfection using ozone. Aquaculture, 318 (3-4). pp. 475-478.

Melville, J., Ritchie, E.G., Chapple, S.N.J., Glor, R.E., and Schulte II, J.A. (2011) Evolutionary origins and diversification of dragon lizards in Australia's tropical savannas. Molecular Phylogenetics and Evolution, 58 (2). pp. 257-270.

Cappo, Mike, Stowar, Marcus, Syms, Craig, Johansson, Charlotte, and Cooper, Tim (2011) Fish-habitat associations in the region offshore from James price point - a rapid assessment using baited remote underwater video stations (BRUVS). Journal of the Royal Society of Western Australia, 94 (2). pp. 303-321.

Remais, Justin V., Xiao, Ning, Akullian, Adam, Qui, Dongchuan, and Blair, David (2011) Genetic assignment methods for gaining insight into the management of infectious disease by understanding pathogen, vector, and host movement. PLoS Pathogens, 7 (4). pp. 1-5.

Miller, Emily J., Eldridge, Mark D.B., Morris, Keith D., Zenger, Kyall R., and Herbert, Catherine A. (2011) Genetic consequences of isolation: island tammar wallaby (Macropus eugenii) populations and the conservation of threatened species. Conservation Genetics, 12 (6). pp. 1619-1631.

Schlüens, Ellen A., Wegener, Benjamin J., and Robson, Simon K.A. (2011) Genetic polyethism and nest building in the weaver ant Oecophylla smaragdina (FABRI-CIUS, 1775) (Hymenoptera: Formicidae). Myrmecological News, 15. pp. 7-11.

Gongora, Jaime, Swan, Amelia B., Chong, Amanda Y., Ho, Simon Y.W., Damayanti, Chandramaya S., Kolomyjec, Stephen, Grant, Tom, Miller, Emily, Blair, David, Furlan, Elise, and Gust, Nick (2011) Genetic structure and phylogeography of platypuses revealed by mitochondrial DNA. Journal of Zoology, 286 (2). pp. 110-119.

Weber, J.C,, Sotelo Montes, C., Cornelius, J., and Ugarte-Guerra, J. (2011) Genetic variation in tree growth, stem form and mortality of Guazuma crinita in slower and faster-growing plantations in the Peruvian Amazon. Silvae Genetica, 60 (2). pp. 70-78.

Herler, Juergen, Munday, Philip L., and Hernaman, Vanessa (2011) Gobies on coral reefs. In: Patzner, Robert A., Van Tassel, James L., Kovacic, Marcelo, and Kapoor, B.G., (eds.) The Biology of Gobies. Science Publishers, Boca Raton, FL, pp. 493-529.

Garside, A.L., and Bell, M.J. (2011) Growth and yield responses to amendments to the sugarcane monoculture: towards identifying the reasons behind the response to breaks. Crop & Pasture Science, 62 (9). pp. 776-789.

Bricker, Eric, Waycott, Michelle, Calladine, Ainsley, and Zieman, Joseph C. (2011) High connectivity across environmental gradients and implications for phenotypic plasticity in a marine plant. Marine Ecology Progress Series, 423. pp. 57-67.

Miller-Sims, Vanessa C., Atema, Jelle, Gerlach, Gabriele, and Kingsford, Michael (2011) How stable are the reef odor preferences of settling reef fish larvae? Marine and Freshwater Behaviour and Physiology, 44 (3). pp. 133-141.

Velho, Nandini, Srinivasan, Umesh, Prashanth, N.S, and Laurance, William F. (2011) Human disease hinders anti-poaching efforts in Indian nature reserves. Biological Conservation, 144 (9). pp. 2382-2385.

Zhang, Wenbao, Li, Jun, Duke, Mary, Jones, Malcolm K., Kaung, Ling, Zhang, Jianfeng, Blair, David, Li, Yuesheng, and McManus, Donald P. (2011) Inconsistent protective efficacy and marked polymorphism limits the value of Schistosoma japonicum tetraspanin-2 as a vaccine target. PLoS Neglected Tropical Disease, 5 (5). pp. 1-11.

Reside, April E., Watson, Ian, VanDerWal, Jeremy, and Kutt, Alex S. (2011) Incorporating low-resolution historic species location data decreases performance of distribution models. Ecological Modelling, 222 (18). pp. 3444-3448.

Abrantes, Kátya G., and Barnett, Adam (2011) Intrapopulation variations in diet and habitat use in a marine apex predator, the broadnose sevengill shark Notorynchus cepedianus. Marine Ecology Progress Series, 442. pp. 133-148.

Gratani, Monica, Butler, James R.A., Royee, Frank, Valentine, Peter, Burrows, Damien, Canendo, Warren I., and Anderson, Alex S. (2011) Is Validation of Indigenous Ecological Knowledge a Disrespectful Process? A case study of traditional fishing poisons and invasive fish management from the Wet Tropics, Australia. Ecology and Society, 16 (3). pp. 1-14.

Sen Gupta, Tarun, Grant, Maggie, Jukka, Clare, and Woolley, Torres (2011) Key factors ensuring quality of rural placements. International Journal of Child Health and Human Development, 4 (1). 63- 74.

Tan, Siong Kiat, and Clements, Gopalsamy Reuben (2011) Limicolaria flammea (Müller, 1774), another potentially invasive African land snail in tropical Asia. Tropical Conservation Science, 4 (1). pp. 97-102.

Sparks, Tim H., Butchart, Stuart H.M., Balmford, Andrew, Bennun, Leon, Stanwell-Smith, Damon, Walpole, Matt, Bates, Nicholas R., Bomhard, Bastian, Buchanan, Graeme M., Chenery, Anna M., Collen, Ben, Csirke, Jorge, Diaz, Robert J., Dulvy, Nicholas K., Fitzgerald, Claire, Kapos, Valerie, Mayaux, Philippe, Tierney, Megan, Waycott, Michelle, Wood, Louisa, and Green, Rhys E. (2011) Linked indicator sets for addressing biodiversity loss. Oryx, 45 (3). pp. 411-419.

Vail, A.L., and Sinclair-Taylor, T. (2011) Mass schooling and mortality of Canthigaster bennetti in Sulawesi. Coral Reefs, 30 (1). p. 251.

Hagihara, Rie, Jones, Rhondda, Sheppard, James, Hodgson, Amanda, and Marsh, Helene (2011) Minimizing errors in the analysis of dive recordings from shallow-diving animals. Journal of Experimental Marine Biology and Ecology, 399 (2). pp. 173-181.

Wedding, B.B., Wright, C., Grauf, S., White, R.D., and Gadek, P.A. (2011) Near infrared spectroscopy as a rapid non-invasive tool for agricultural and industrial process management with special reference to avocado and sandalwood industries. Desalination and Water Treatment, 32. pp. 365-372.

Sanetra, M. (2011) Nestmate relatedness in the Australian ant myrmecia pyriformis smith, 1858 (Hymenoptera: Formicidae). Myrmecological News, 15. pp. 77-84.

Zafir, Abdul Wahab Ahmad, Payne, Junaidi, Mohamed, Azlan, Lau, Ching Fong, Shama, Dionysius Shankar Kumar, Alfred, Raymond, Williams, Amirtharaj Christy, Nathan, Senthival, Ramono, Widodo S., and Clements, Gopalasamy Reuben (2011) Now or never: what will it take to save the Sumatran rhinoceros Dicerorhinus sumatrensis from extinction? Oryx, 45 (2). pp. 225-233.

Largent, David L., and Abell-Davis, Sandra E. (2011) Observations on Inocephalus virescens comb. nov. and Alboleptonia stylophora from northeastern Queensland. Mycotaxon, 116. pp. 231-245.

Chambers, Lynda E., Devney, Carol A., Congdon, Bradley C., Dunlop, Nic, Woehler, Eric J., and Dann, Peter (2011) Observed and predicted effects of climate on Australian seabirds. Emu, 111 (3). pp. 235-251.

Murphy, Helen T., VanDerWal, Jeremy, and Lovett-Doust, Jon (2011) One, two and three-dimensional geometric constraints and climatic correlates of North American tree species richness. Ecography, 34 (2). pp. 267-275.

Ruslandi, X, Venter, Oscar, and Putz, Francis E. (2011) Overestimating conservation costs in Southeast Asia. Frontiers in Ecology and the Environment, 9. pp. 542-544.

Wang, Wenlin, Blair, David, Min, Tian, Li, Fang, and Wang, Dianhua (2011) Paragonimus worm from a New Guinea native in 1926. Asian Pacific Journal of Tropical Medicine, 4 (1). pp. 76-78.

Palmer, Caroline V., McGinty, Elizabeth S., Cummings, David J., Smith, Stephanie M., Bartels, Erich, and Mydlarz, Laura D. (2011) Patterns of coral ecological immunology: variation in the responses of Caribbean corals to elevated temperature and a pathogen elicitor. Journal of Experimental Biology, 214 (24). pp. 4240-4249.

Krajewski, João Paulo, Floeter, Sergio R., Jones, Geoffrey P., and Leite, Fosca P.P (2011) Patterns of variation in behaviour within and among reef fish species on an isolated tropical island: influence of exposure and substratum. Journal of the Marine Biological Association of the United Kingdom, 91 (Special Issue 6). pp. 1359-1368.

Cernusak, Lucas A., Hutley, Lindsay B., Beringer, Jason, Holtum, Joseph A.M., and Turner, Benjamin L. (2011) Photosynthetic physiology of eucalypts along a sub-continental rainfall gradient in northern Australia. Agricultural and Forest Meteorology, 151 (11). 1462-1470.

Chapple, David G., Hoskin, Conrad J., Chapple, Stephanie N.J., and Thompson, Michael B. (2011) Phylogeographic divergence in the widespread delicate skink (Lampropholis delicata) corresponds to dry habitat barriers in eastern Australia. BMC Evolutionary Biology, 11. pp. 1-18.

Gaither, Michelle R., Bowen, Brian W., Bordenave, Tiane-Rae, Rocha, Luiz A., Newman, Stephen J., Gomez, Juan A., van Herwerden, Lynne, and Craig, Matthew T. (2011) Phylogeography of the reef fish Cephalopholis argus (Epinephelidae) indicates Pleistocene isolation across the indo-pacific barrier with contemporary overlap in the coral triangle. BMC Evolutionary Biology, 11. pp. 1-15.

Garland, Stephen, James, Timothy Y. , Blair, David, Berger, Lee, and Skerratt, Lee F. (2011) Polymorphic repetitive loci of the amphibian pathogen Batrachochytrium dendrobatidis. Diseases of Aquatic Organisms, 97 (1). pp. 1-9.

Velho, Nandini, and Krishnadas, Meghna (2011) Post-logging recovery of animal-dispersed trees in a tropical forest site in north-east India. Tropical Conservation Science, 4 (4). pp. 405-419.

Maynard, J.A., Anthony, K.R.N., Harvell, C.D., Burgman, M.A., Beeden, R., Sweatman, H., Heron, S.F., Lamb, J.B., and Willis, B.L. (2011) Predicting outbreaks of a climate-driven coral disease in the Great Barrier Reef. Coral Reefs, 30 (2). pp. 485-495.

Richards, Z.T., and Hobbs, J.P.A. (2011) Prehistoric Pacific Island kings entombed in truncated coral pyramids. Coral Reefs, 30 (3). p. 737.

Pandolfi, John M., Connolly, Sean R., Marshall, Dustin J., and Cohen, Anne L. (2011) Projecting coral reef futures under global warming and ocean acidification. Science, 333 (6041). pp. 418-422.

Trip, E.D.L., Raubenheimer, D., Clements, K.D., and Choat, J.H. (2011) Reproductive demography of a temperate protogynous and herbivorous fish, Odax pullus (Labridae, Odacini). Marine and Freshwater Research, 62 (2). pp. 176-186.

Giam, Xingli, Clements, Gopalasamy Reuben, Aziz, Sheema Abdul, Chong, Kwek Yan, and Miettinen, Jukka (2011) Rethinking the 'back to wilderness' concept for Sundaland's forests. Biological Conservation, 144 (12). pp. 3149-3152.

Largent, David L., Abell-Davis, Sandra E., Cummings, Griffin A., Ryan, Kathryn L., and Bergemann, Sarah E. (2011) Saxicolous species of Claudopus (Agaricales, Entolomataceae) from Australia. Mycotaxon, 116. pp. 253-264.

Milione, Michael, and Southgate, Paul (2011) Seasonal changes in recruitment of Pteria penguin in North Queensland, Australia. Journal of Shellfish Research, 30 (1). pp. 89-94.

Chong-Seng, K.M., Cole, A.J., Pratchett, M.S., and Willis, B.L. (2011) Selective feeding by coral reef fishes on coral lesions associated with brown band and black band disease. Coral Reefs, 30 (2). pp. 473-481.

Wueringer, B.E., Peverell, S.C., Seymour, J., Squire, L., and Collin, S.P. (2011) Sensory systems in sawfishes. 2. The lateral line. Brain Behavior and Evolution, 78 (2). pp. 150-161.

Hughes, T.P., Bellwood, D.R., Baird, A.H., Brodie, J., Bruno, J.F., and Pandolfi, J.M. (2011) Shifting base-lines, declining coral cover, and the erosion of reef resilience: comment on Sweatman et al. (2011). Coral Reefs, 30 (3). pp. 653-660.

Clode, P.L., Lema, K., Saunders, M., and Weiner, S. (2011) Skeletal mineralogy of newly settling Acropora millepora (Scleractinia) coral recruits. Coral Reefs, 30 (1). pp. 1-8.

Windsor, Leigh (2011) Some terrestrial flatworm taxa (Platyhelminthes: Tricladida: Continenticola) of the Subantarctic Islands of New Zealand. Tuhinga: Records of the Museum of New Zealand Te Papa Tongarewa, 22. pp. 161-169.

Laurance, William F. (2011) "Special Agricultural and Business Leases" imperil forests in Papua New Guinea. Pacific Conservation Biology, 17 (4). pp. 297-298.

Newman, S.J., Pember, M.B., Rome, B.M., Mitsopoulos, G.E.A., Skepper, C.L., Allsop, Q., Saunders, T., Ballagh, A.C., van Herwerden, L., Garrett, R.N., Gribble, N.A., Stapley, J.M., Meeuwig, J.J., Moore, B.R., and Welch, D.J. (2011) Stock structure of blue threadfin Eleutheronema tetradactylum across northern Australia as inferred from stable isotopes in sagittal otolith carbonate. Fisheries Management and Ecology, 18 (3). pp. 246-257.

Dell, Anthony I, Pawar, Samraat, and Savage, Van M. (2011) Systematic variation in the temperature dependence of physiological and ecological traits. Proceedings of the National Academy of Sciences of the United States of America, 108 (26). pp. 10591-10596.

Lefèvre, Carine D., and Bellwood, David R. (2011) Temporal variation in coral reef ecosystem processes: herbivory of macroalgae by fishes. Marine Ecology Progress Series, 422. pp. 239-251.

Collier, Catherine J., Uthicke, Sven, and Waycott, Michelle (2011) Thermal tolerance of two seagrass species at contrasting light levels: Implications for future distribution in the Great Barrier Reef. Limnology and Oceanography, 56 (6). pp. 2200-2210.

Asaah, Ebenezar K., Tchoundjeu, Zacharie, Leakey, Roger R.B., Takousting, Bertin, Njong, James, and Edang, Innocent (2011) Trees, agroforestry and multifunctional agriculture in Cameroon. International Journal of Agricultural Sustainability, 9 (1). pp. 110-119.

Hoskin, Conrad J., and Aland, Kieran (2011) Two new frog species (Microhylidae: Cophixalus) from boulder habitats on Cape York Peninsula, north-east Australia. Zootaxa, 3027. pp. 39-51.

Edwards, David, Giam, Xingli, Fisher, Brendan, and Wicove, David S. (2011) Underestimating the costs of conservation in Southeast Asia. Frontiers in Ecology and the Environment, 9 (10). pp. 544-545.

Le, T.H., Sato, Y., De , N., Nga, N., Nhung, N., Vu, T.T., Sithithaworn, P., McManus, D.P., Agatsuma, T., and Blair, D. (2011) Updated phylogenetic scheme based on the complete mitochondrial protein-coding sequence for common parasitic flatworms. Tropical Medicine and International Health, 16 (S1). p. 222.

Bell, Johann D., Johnson, Johanna E., Ganachaud, Alex S., Gehrke, Peter C., Hobday, Alistair J., Hoegh-Guldberg, Ove, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice M., Pickering, Tim, Pratchett, Morgan S., and Waycott, Michelle (2011) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change: summary for Pacific Island Countries and Territories. Secretariat of the Pacific Community, New Caledonia, Noumea.

Pickering, Timothy D., Ponia, Ben, Hair, Cathy A., Southgate, Paul C., Poloczanska, Elvira S., Della Patrona, Luc, Teitelbaum, Antoine, Mohan, Chadag V., Phillips, Michael J., Bell, Johann D., and De Silva, Sena (2011) Vulnerability of aquaculture in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 647-731.

Gehrke, Peter C., Sheaves, Marcus J., Boseto, David T., Figa, Boga S., and Wani, Jacob (2011) Vulnerability of freshwater and estuarine fisheries in the tropical Pacific to climate change. In: Bell, Johann D., Johnson, Johanna E., and Hobday, Alistair J., (eds.) Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change. Secretariat of the Pacific Community, Noumea, New Caledonia, pp. 577-646.

Luis-Negrete, Lisandro Hector, Brusa, Francisco, and Winsor, Leigh (2011) The blue land planarian Caenoplane coerulea, an invader in Argentina. Revista Mexicana de Biodiversidad, 82 (1). pp. 287-291.

Woodcock, Paul, Edwards, David P., Fayle, Tom M., Newton, Rob J., Vun Khen, Chey, Bottrell, Simon H., and Hamer, Keith C. (2011) The conservation value of South East Asia's highly degraded forests: evidence from leaf-litter ants. Philosophical Transactions of the Royal Society B: Biological Sciences, 366 (1582). pp. 3256-3264.

Woinarski, John C.Z., Legge , Sarah, Fitzsimons, James A., Traill, Barry J., Burbidge, Andrew A., Fisher, Alaric, Firth, Ron S.C., Gordon, Iain J., Griffiths, Anthony D., Johnson, Christopher N., McKenzie, Norm L., Palmer, Carol, Radford, Ian, Rankmore, Brooke, Ritchie, Euan G., Ward, Simon, and Ziembicki, Mark (2011) The disappearing mammal fauna of northern Australia: context, cause, and response. Conservation Letters, 4 (3). pp. 192-201.

Tziouveli, Vasiliki, Hall, Mike, and Smith, Greg (2011) The effect of maturation diets on the reproductive output of the white-striped cleaner shrimp, Lysmata amboinensis. Journal of the World Aquaculture Society, 42 (1). pp. 56-65.

Cornelius, Jonathan, Montes, Sotelo C., Ugarte-Guerra, Julio, and Weber, J.C. (2011) The effectiveness of phenotypic selection in natural populations: a case study from the Peruvian Amazon. Silvae Genetica, 60 (5). pp. 205-209.

Wassnig, Matthew, and Southgate, Paul (2011) The effects of egg stocking density and antibiotic treatment on survival and development of winged pearl oyster (Pteria Penguin, Röding 1798) embryos. Journal of Shellfish Research, 30 (1). pp. 103-107.

Welladsen, Heather M., Heimann, Kirsten, and Southgate, Paul C. (2011) The effects of exposure to near-future levels of ocean acidification on activity and byssus Production of the Akoya pearl oyster, Pinctada fucata. Journal of Shellfish Research, 30 (1). pp. 85-88.

Thuesen, P.A., Russell, D.J., Thomson, F.E., Pearce, M.G., Vallance, T.D., and Hogan, A.E. (2011) An evaluation of electrofishing as a control measure for an invasive tilapia (Oreochromis mossambicus) population in northern Australia. Marine and Freshwater Research, 62 (2). pp. 110-118.

Boyero, Luz, Pearson, Richard G., Gessner, Mark O., Barmuta, Leon A., Ferreira, Verónica, Gracia, Manuel A.S., Dudgeon, David, Boulton, Andrew J., Callisto, Marcos, Chauvet, Eric, Helson, Julie E., Bruder, Andreas, Albariño, Ricardo J., Yule, Catherine M., Arunachalam, Muthukumarasamy, Davies, Judy N., Figueroa, Ricardo, Flecker, Alexander S., Ramirez, Alonso, Death, Russell, Iwata, Tomoya, Mathooko, Jude M., Mathuriau, Catherine, Goncalves, José F., Moretti, Marcelo, Jinggut, Tajang, Lamothe, Sylvian, M'Erimba, Charles, Ratnarajah, Lavenia, Schindler, Markus H., Castela, José, Buria, Leonardo, Cornejo, Aydeé, Villanueva, Verónica, and West, Derek C. (2011) A global experiment suggests climate warming will not accelerate litter decomposition in streams but might reduce carbon sequestration. Ecology Letters, 14 (3). pp. 289-294.

Sale, Peter F., Feary, David, Burt, John A., Bauman, Andrew G., Cavalcante, Geórgenes H., Drouillard, Kenneth G., Kjerfve, Björn, Marquis, Elise, Trick, Charles G., Usseglio, Paolo, and Van Lavieren, Hanneke (2011) The growing need for sustainable ecological management of marine communities of the Persian Gulf. Ambio, 40 (1). pp. 4-17.

Bateman, Brooke L., and Johnson, Christopher N. (2011) The influences of climate, habitat and fire on the distribution of cockatoo grass (Alloteropsis semialata) (Poaceae) in the Wet Tropics of northern Australia. Australian Journal of Botany, 59 (4). pp. 315-323.

Mydlarz, Laura D., and Palmer, Caroline V. (2011) The presence of multiple phenoloxidases in Caribbean reef-building corals. Comparative Biochemistry and Physiology, Part A, 159 (4). pp. 372-378.

Januchowski-Hartley, S.R., Visconti, P., and Pressey, R.L. (2011) A systematic approach for prioritizing multiple management actions for invasive species. Biological Invasions, 13 (5). pp. 1241-1253.

Johansen, J.L., Vaknin, R., Steffensen, J.F., and Domenici, P. (2010) Kinematics and energetic benefits of schooling in the labriform fish, striped surfperch Embiotoca lateralis. Marine Ecology Progress Series, 420. pp. 221-229.

Newman, Stephen J., Allsop, Quentin, Ballagh, Aaron C., Garrett, Rod N., Gribble, Neil, Meeuwig, Jessica J., Mitsopoulos, Gabby E.A., Moore, Bradley R., Pember, Matthew B., Rome, Ben M., Saunders, Thor, Skepper, Craig L., Stapley, Jason M., van Herwerden, Lynne, and Welch, David J. (2010) Variation in stable isotope (δ18O and δ13C) signatures in the sagittal otolith carbonate of king threadfin, Polydactylus macrochir across northern Australia reveals multifaceted stock structure. Journal of Experimental Marine Biology and Ecology, 396 (1). pp. 53-60.

Laurance, William (2010) Heatshock. New Scientist, 208 (2789). pp. 37-39.

Barnett, Adam, Abrantes, Kátya G., Stevens, John D., Bruce, Barry D., and Semmens, Jayson M. (2010) Fine-scale movements of the broadnose sevengill shark and its main prey, the gummy shark. PLoS ONE, 5 (12). pp. 1-10.

Clements, Gopalsamy Reuben, Sayer, Jeffrey, Boedhihartono, Agni K., Venter, Oscar, Lovejoy, Thomas, Koh, Lian Pin, and Laurance, William F. (2010) Cautious Optimism over Norway-Indonesia REDD Pact. Conservation Biology,, 24 (6). pp. 1437-1438.

Done, T.J., DeVantier, L.M., Turak, E., Fisk, D.A., Wakeford, M., and van Woesik, R. (2010) Coral growth on three reefs: development of recovery benchmarks using a space for time approach. Coral Reefs, 29 (4). pp. 815-833.

Phillips, B.L., Brown, G.P., and Shine, R. (2010) Evolutionarily accelerated invasions: the rate of dispersal evolves upwards during the range advance of cane toads. Journal of Evolutionary Biology, 23 (12). pp. 2595-2601.

Slater, M.J., Carton, A.G., and Jeffs, A.G. (2010) Highly localised distribution patterns of juvenile sea cucumber Australostichopus mollis. New Zealand Journal of Marine and Freshwater Research, 44 (4). pp. 201-216.

Weeks, Rebecca, Russ, Garry R., Bucol, Abner A., and Alcala, Angel C. (2010) Incorporating local tenure in the systematic design of marine protected area networks. Conservation Letters, 3 (6). pp. 445-453.

McAlpine, C.A., Ryan, J.G. , Seabrook, L., Thomas, S., Dargusch, P.J., Syktus, J.I., Pielke Sr, R.A., Etter, A.E., Fearnside, P.M, and Laurance, W.F. (2010) More than CO2: a broader paradigm for managing climate change and variability to avoid ecosystem collapse. Current Opinion in Environmental Sustainability, 2 (5-6). pp. 334-346.

Berumen, M. L, Walsh, H.J., Raventos, N., Planes, S., Jones, G.P., Starczak, V., and Thorrold, S.R. (2010) Otolith geochemistry does not reflect dispersal history of clownfish larvae. Coral Reefs, 29 (4). pp. 883-891.

Abesamis, R.A., and Russ, G.R. (2010) Patterns of recruitment of coral reef fishes in a monsoonal environment. Coral Reefs, 29 (4). pp. 911-921.

Harrington, Mark G., and Gadek, Paul A. (2010) Phylogenetics of Hopbushes and Pepperflowers (Dodonaea, Diplopeltis – Sapindaceae) based on nuclear ribosomal ITS and partial ETS sequences incorporating secondary structure models. Australian Systematic Botany, 23 (6). pp. 431-442.

Kemp, Darrell (2010) Sexual selection and morphological design: the tale of two territorial butterflies. Australian Journal of Zoology, 58 (5). pp. 289-294.

Gardiner, N.M., and Jones, G.P. (2010) Synergistic effects of habitat preference and gregarious behaviour on habitat use in coral reef cardinalfish. Coral Reefs, 29 (4). pp. 845-856.

Anderson, Kylie L., Deveson, Ted E., Sallam, Nader, and Congdon, Bradley C. (2010) Wind-assisted migration potential of the island sugarcane planthopper Eumetopina flavipes (Hemiptera: Delphacidae): implications for managing incursions across an Australian quarantine frontline. Journal of Applied Ecology, 47 (6). pp. 1310-1319.

Parsons, Jennifer G., VanDerWal, Jeremy, Robson, Simon K.A., and Shilton, Louise A. (2010) The implications of sympatry in the spectacled and grey headed flying-fox, Pteropus conspicillatus and P. poliocephalus (Chiroptera: Pteropodidae). Acta Chiropterologica, 12 (2). pp. 301-309.

Naskrecki, Piotr, and Rentz, David C.F. (2010) Studies in the orthopteran fauna of Melanesia: new katydids of the tribe Agraeciini from Papua New Guinea (Orthoptera: Tettigoniidae: Conocephalinae). Zootaxa, 2664. pp. 1-35.

Magnusson, Marie, Heimann, Kirsten, Quayle, Pamela, and Negri, Andrew P. (2010) Additive toxicity of herbicide mixtures and comparative sensitivity of tropical benthic microalgae. Marine Pollution Bulletin, 60 (11). pp. 1978-1987.

Wen, C.K-C. , Pratchett, M.S., Shao, K-T., Kan, K-P., and Chan, B.K.K. (2010) Effects of habitat modification on coastal fish assemblages. Journal of Fish Biology, 77 (7). pp. 1674-1687.

Clifton, Julian, Cullen, Leanne C., Haapkyla, Jessica, and Unsworth, Richard K.F. (2010) Ensuring appropriate and proportionate responses to environmental threats: a response to Caras and Pasternak. Ocean & Coastal Management, 53 (11). pp. 700-702.

Briant, Gaël, Gond, Valéry, and Laurance, Susan G.W. (2010) Habitat fragmentation and the desiccation of forest canopies: a case study from eastern Amazonia. Biological Conservation, 143 (11). pp. 2763-2769.

Welladsen, Heather M., Southgate, Paul C., and Heimann, Kirsten (2010) The effects of exposure to near-future levels of ocean acidification on shell characteristics of Pinctada fucata (Bivalvia: Pteriidae). Molluscan Research, 30 (3). pp. 125-130.

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Camus, Thomas, and Zeng, Chaoshu (2010) Roles of microalgae on total egg production over female lifespan and egg incubation time, naupliar and copepodite survival, sex ratio and female life expectancy of the copepod Bestiolina similis. Aquaculture Research, 41 (11). pp. 1717-1726.

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Booth, Mark A., Allan, Geoff L., and Pirozzi, Igor (2010) Estimation of digestible protein and energy requirements of yellowtail kingfish Seriola lalandi using a factorial approach. Aquaculture, 307 (3-4). pp. 247-259.

Jones, Brendan L., Waycott, Michelle, Robson, Heather L.A., Calladine, Ainsley, and Page, Tony (2010) Isolation and characterization of microsatellite loci in Santalum lanceolatum and Santalum leptocladum (Santalaceae). American Journal of Botany, 2010. e97-e98.

Johansson, C.L., Bellwood, D.R., and Depczynski, M. (2010) Sea urchins, macroalgae and coral reef decline: a functional evaluation of an intact reef system, Ningaloo, Western Australia. Marine Ecology Progress Series, 414. pp. 65-74.

Clements, Gopalasamy Reuben, Giam, Xingli, and Laurance, William F. (2010) Will India's mega-census leave a mega-footprint? Current Science, 99 (5). p. 556.

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Januchowski, S.R., Pressey, R.L., VanDerWal, J., and Edwards, A. (2010) Characterizing errors in digital elevation models and estimating the financial costs of accuracy. International Journal of Geographical Information Science, 24 (9). pp. 1327-1347.

Walker, Stefan P.W., Thibaut, Loïc, and McCormick, Mark I. (2010) Density-dependent sex ratio adjustment and the allee effect: a model and a test using a sex-changing fish. American Naturalist, 176 (3). pp. 312-321.

Williams, Stephen E., Shoo, Luke P., Henriod, Robert, and Pearson, Richard G. (2010) Elevational gradients in species abundance, assemblage structure and energy use of rainforest birds in the Australian Wet Tropics bioregion. Austral Ecology, 35 (6). pp. 650-664.

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Abrantes, Kátya Gisela, and Sheaves, Marcus (2010) Importance of freshwater flow in terrestrial–aquatic energetic connectivity in intermittently connected estuaries of tropical Australia. Marine Biology, 157 (9). pp. 2071-2086.

Robinson, Nicholas Andrew, Schipp, Glenn, Bosmans, Jérôme, and Jerry, Dean Robert (2010) Modelling selective breeding in protandrous, batch-reared Asian sea bass (Lates calcarifer, Bloch) using walkback selection. Aquaculture Research, 41 (10). e643-e655.

Almany, G.R., Hamilton, R.J., Williamson, D.H., Evans, R.D., Jones, G.P., Matawai, M., Potuku, T., Rhodes, K.L., Russ, G.R., and Sawynock, B. (2010) Research partnerships with local communities: two case studies from Papua New Guinea and Australia. Coral Reefs, 29 (3). pp. 567-576.

Slater, Matthew J., and Carton, Alexander G. (2010) Sea cucumber habitat differentiation and site retention as determined by intraspecific stable isotope variation. Aquaculture Research, 41 (10). pp. 695-702.

Kaur, Kamaljit, Jalota, Rajesh K., and Midmore, David J. (2010) Soil respiration rate and its sensitivity to temperature in pasture systems of dry-tropics. Acta Agriculturae Scandinavica, Section B - Soil and Plant Science, 6 (5). pp. 407-419.

Ballagh, Debra A., Fielder, D. Stewart, and Pankhurst, Patricia M. (2010) Weaning requirements of larval mulloway, Argyrosomus japonicus. Aquaculture Research, 41 (10). e493-e504.

Heron, Scott F., Willis, Bette L., Skirving, William J., Eakin, C. Mark, Page, Cathie A., and Miller, Ian R. (2010) Summer hot snaps and winter conditions: modelling white syndrome outbreaks on Great Barrier Reef corals. PLoS ONE, 5 (8). pp. 1-11.

Zhang, Wenbao, Li, Jun, Jones, Malcolm K., Zhang, Zhuangzhi, Zhao, Li, Blair, David, and McManus, Donald Peter (2010) The Echinococcus granulosus antigen B gene family comprises at least 10 unique genes in five subclasses which are differentially expressed. PLoS Neglected Tropical Diseases, 4 (8). pp. 1-11.

Russ, Garry R., and Alcala, Angel C. (2010) Decadal-scale rebuilding of predator biomass in Philippine marine reserves. Oecologia, 163 (4). pp. 1103-1106.

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Pollock, F. Joseph, Morris, Pamela J., Willis, Bette L., and Bourne, David G. (2010) Detection and quantification of the coral pathogen vibrio coralliilyticus by real-time PCR with TaqMan fluorescent probes. Applied and Environmental Microbiology, 76 (15). pp. 5282-5286.

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Page, Tony, Southwell, Ian, Russell, Mike, Tate, Hanington, Tungon, Joseph, Sam, Chanel, Dickinson, Geoff, Robson, Ken, and Leakey, Roger R.B. (2010) Geographic and phenotypic variation in heartwood and essential-oil characters in natural populations of Santalum austrocaledonicum in Vanuatu. Chemistry & Biodiversity, 7 (8). pp. 1990-2006.

Ceccarelli, F. Sara (2010) New species of ant-mimicking jumping spiders of the genus Myrmarachne MacLeay, 1839 (Araneae: Salticidae) from north Queensland, Australia. Australian Journal of Entomology, 49 (3). pp. 245-255.

Winters, Kate L., van Herwerden, Lynne, Choat, J. Howard, and Robertson, D.R. (2010) Phylogeography of the Indo-Pacific parrotfish Scarus psittacus: isolation generates distinctive peripheral populations in two oceans. Marine Biology, 157 (8). pp. 1679-1691.

Newey, Philip S., Robson, Simon K.A., and Crozier, Ross H. (2010) Weaver ants Oecophylla smaragdina encounter nasty neighbors rather than dear enemies. Ecology, 91 (8). pp. 2366-2372.

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Laurance, William (2010) I applaud Norway's $1bn funding offer to Indonesia. But where will that money go? The Ecologist ( ). pp. 1-2.

Sachlikidis, N.G., Jones, C.M., and Seymour, J.E. (2010) The effect of temperature on the incubation of eggs of the tropical rock lobster Panulirus ornatus. Aquaculture, 305 (1-4). pp. 79-83.

Woodhams, Douglas C., Kenyon, Nicole, Bell, Sara C., Alford, Ross A., Chen, Shuo, Billheimer, Dean, Shyr, Yu, and Rollins-Smith, Louise A. (2010) Adaptations of skin peptide defences and possible response to the amphibian chytrid fungus in populations of Australian green-eyed treefrogs, Litoria genimaculata. Diversity and Distributions, 16 (4). pp. 703-712.

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Schlüns, Helge, Sadd, Ben M., Schmid-Hempel, Paul, and Crozier, Ross H. (2010) Infection with the trypanosome Crithidia bombi and expression of immune-related genes in the bumblebee Bombus terrestris. Developmental and Comparative Immunology, 34 (7). pp. 705-709.

Alva-Campbell, Yvette, Floeter, Sergio R., Robertson, D. Ross, Bellwood, David R., and Bernardi, Giacomo (2010) Molecular phylogenetics and evolution of Holacanthus angelfishes (Pomacanthidae). Molecular Phylogenetics and Evolution, 56 (1). pp. 456-461.

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Laurance, Susan G.W., Andrade, Ana, and Laurance, William F. (2010) Unanticipated effects of stand dynamism on Amazonian tree diversity. Biotropica, 42 (4). pp. 429-434.

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Kvingedal, Renate, Evans, Brad S., Lind, Curtis E., Taylor, Joseph J.U., Dupont-Nivet, Mathilde, and Jerry, Dean R. (2010) Population and family growth response to different rearing location, heritability estimates and genotype×environment interaction in the silver-lip pearl oyster (Pinctada maxima). Aquaculture, 304 (1-4). pp. 1-6.

Penin, Lucie, Michonneau, François, Baird, Andrew H., Connolly, Sean R., Pratchett, Morgan S., Kayal, Mohsen, and Adjeroud, Mehdi (2010) Early post-settlement mortality and the structure of coral assemblages. Marine Ecology Progress Series, 408. pp. 55-64.

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Lawn, Bob (2010) Soybean improvement in the tropics & subtropics. In: Proceedings of Australia-Indonesia Agriculture & Food Security Workshop, p. 38. From: Australia-Indonesia Agriculture & Food Security Workshop, 8-9 June 2010, Canberra, ACT, Australia.

Jones, D.B., Jerry, D.R., McCormick, M.I., and Bay, L.K. (2010) The population genetic structure of a common tropical damselfish on the Great Barrier Reef and eastern Papua New Guinea. Coral Reefs, 29 (2). pp. 455-467.

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Garside, A.L., Poggio, M.G., Park, G., Salter, B., and Perna, J. (2010) Long-term Ingham and Mackay farming system experiments: comparisons between permanent non-tilled beds and re-formed beds. Sugar Cane International, 28 (3). pp. 95-101.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Cui, Zhaoxia (2010) Reproductive performance and offspring quality of the first and the second brood of female swimming crab, Portunus Trituberculatus. Aquaculture, 303 (1-4). pp. 94-100.

Littman, Raechel A., Bourne, David G., and Willis, Bette L. (2010) Responses of coral-associated bacterial communities to heat stress differ with Symbiodinium type on the same coral host. Molecular Ecology, 19 (9). pp. 1978-1990.

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Llewelyn, John, Schwarzkopf, Lin, Alford, Ross , and Shine, Richard (2010) Something different for dinner? Responses of a native Australian predator (the keelback snake) to an invasive prey species (the cane toad). Biological Invasions, 12 (5). pp. 1045-1051.

Murray, Kris, Retallick, Richard, McDonald, Keith R., Mendez, Diana, Aplin, Ken, Kirkpatrick, Peter, Berger, Lee, Hunter, David, Hines, Harry B., Campbell, R., Pauza, Matthew, Driessen, Michael, Speare, Richard, Richards, Stephen J., Mahony, Michael, Freeman, Alastair, Phillott, Andrea D., Hero, Jean-Marc, Kriger, Kerry, Driscoll, Don, Felton, Adam, Puschendorf, Robert, and Skerratt, Lee F. (2010) The distribution and host range of the pandemic disease chytridiomycosis in Australia, spanning surveys from 1956–2007. Ecology, 91 (5). p. 1557.

Laurance, William F., and Venter, Oscar (2010) Measuring forest changes. Science, 328 (5978). p. 569.

Bannister, R.J., Battershill, C.N., and de Nys, R. (2010) Demographic variability and long-term change in a coral reef sponge along a cross-shelf gradient of the Great Barrier Reef. Marine and Freshwater Research, 61 (4). pp. 389-396.

Hadfield, Kerry A., Bruce, Niel L., and Smit, Nico J. (2010) Redescription of the monotypic genus Cinusa Schioedte and Meinert, 1884 (Isopoda, Cymothoidae), a buccal-cavity isopod from South Africa. Zootaxa, 2437. pp. 51-68.

Hobbs, Jean-Paul A., Ayling, Anthony M., Choat, J. Howard, Gilligan, Justin J., McDonald, Christian A., Neilson, Joseph, and Newman, Stephen J. (2010) New records of marine fishes illustrate the biogeographic importance of Christmas Island, Indian Ocean. Zootaxa, 2422. pp. 63-68.

Yang, Xiaozhen, Wang, Jinfeng, Fan, Peng, Zhao, Liulan, Cheng, Yongxu, Wu, Xugan, and Zeng, Chaoshu (2010) Survival, growth, sexual maturity and tissue histamine accumulation of the mysis, Neomysis awatschensis and N. japonica Nakazawa, fed histamine supplemented diets. Aquaculture, 302 (3-4). pp. 256-260.

McGinty, Erin L., Evans, Brad S., Taylor, Joseph U.U., and Jerry, Dean R. (2010) Xenografts and pearl production in two pearl oyster species, P. maxima and P. margaritifera: effect on pearl quality and a key to understanding genetic contribution. Aquaculture, 302 (3-4). pp. 175-181.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) A factorial approach to deriving dietary specifications and daily feed intake for mulloway, Argyrosomus japonicus, based on the requirements for digestible protein and energy. Aquaculture, 302 (3-4). pp. 235-242.

McGaugh, Suzanne E., Schwanz, Lisa E., Bowden, Rachel M., Gonzalez, Julie E., and Janzen, Fredric J. (2010) Inheritance of nesting behaviour across natural environmental variation in a turtle with temperature-dependent sex determination. Proceedings of the Royal Society of London Series B, Biological Sciences, 277 (1685). pp. 1219-1226.

Rymer, Tasmin, Pillay, Neville, and Rymer, Tasmin (2010) Female mate choice for paternal care behaviour in African striped mice Rhabdomys pumilio: the role of experience. Behaviour, 147 (9). pp. 1101-1119.

Aldred, Nick, Scardino, Andrew, Cavaco, Andreia, de Nys, Rocky, and Clare, Anthony S. (2010) Attachment strength is a key factor in the selection of surfaces by barnacle cyprids (Balanus amphitrite) during settlement. Biofouling, 26 (3). pp. 287-299.

Chick, Rowan C. (2010) Batch-tagging blacklip abalone (Haliotis rubra) for identification of hatchery-reared individuals on natural coastal reefs in New South Wales, Australia. Journal of Shellfish Research, 29 (1). pp. 209-215.

Weeks, Rebecca, Russ, Garry R., Alcala, Angel C., and White, Alan T. (2010) Effectiveness of marine protected areas in the Philippines for biodiversity conservation. Conservation Biology, 24 (2). pp. 531-540.

Salomon, Yacov, Connolly, Sean R., and Bode, Lance (2010) Effects of asymmetric dispersal on the coexistence of competing species. Ecology Letters, 13 (4). pp. 432-441.

Aswani, Shankar, and Sabetian, Armagan (2010) Implications of urbanization for artisanal parrotfish fisheries in the Western Solomon Islands. Conservation Biology, 24 (2). pp. 520-530.

Laurance, William F., Koh, Lian P., Butler, Rhett, Sodhi, Navjot S., Bradshaw, Corey J.A., Neidel, J. David, Consunji, Hazel, and Vega, Javier Mateo (2010) Improving the performance of the Roundtable on sustainable palm oil for nature conservation. Conservation Biology, 24 (2). pp. 377-381.

Luter, Heidi M., and Duckworth, Alan R. (2010) Influence of size and spatial competition on the bioactivity of coral reef sponges. Biochemical Systematics and Ecology, 38 (2). pp. 146-153.

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Kenyon, Nicole, Phillott, Andrea D., and Alford, Ross A. (2010) Temporal variation in dorsal patterns of juvenile green-eyed tree frogs, Litoria genimaculata (Anura: Hylidae). Herpetological Conservation and Biology, 5 (1). pp. 126-131.

Schmidt, Katrin, and Schwarzkopf, Lin (2010) Visible implant elastomer tagging and toe-clipping: effects of marking on locomotor performance of frogs and skinks. Herpetological Journal, 20 (2). pp. 99-105.

You, Hong, Zhang, Wenbao, Jones, Malcolm K., Gobert, Geoffrey N. , Mulvenna, Jason, Rees, Glynn, Spanevello, Mark, Blair, David, Duke, Mary, Brehm, Klaus, and McManus, Donald P. (2010) Cloning and characterisation of Schistosoma japonicum insulin receptors. PLoS ONE, 5 (3). pp. 1-13.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Wang, Chunlin, and Yang, Xiaozhen (2010) Reproductive performance and offspring quality of wild-caught and pond-reared swimming crab Portunus trituberculatus broodstock. Aquaculture, 301 (1-4). pp. 78-84.

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Hooker, Nanette (2010) Native Grasses for Revegetation in the Townsville Region. Coastal Dry Tropics Landcare, Townsville, QLD, Australia.

de Nys, Rocky, Guenther, Jana, and Uriz, Maria (2010) Natural control of fouling in biofouling. In: Dürr, Simone, and Thomason, Jeremy C., (eds.) Biofouling. Wiley-Blackwell, UK, pp. 109-120.

Narain, Kanwar, Agatsuma, Takeshi, and Blair, David (2010) Paragonimus. In: Liu, Dongyou, (ed.) Molecular Detection of Foodborne Pathogens. CRC Press, Boca Raton, USA, pp. 827-837.

Kingsford, Michael J., and Carlson, Ian J. (2010) Patterns of distribution and movement of fishes, Ophthalmolepis lineolatus and Hypoplectrodes maccullochi, on temperate rocky reefs of south eastern Australia. Environmental Biology of Fishes, 88 (2). pp. 105-118.

Seneca, Francois O., Forêt , Sylvain, Ball, Eldon E., Smith-Keune, Carolyn, Miller, David J., and van Oppen, Madeleine J.H. (2010) Patterns of gene expression in a scleractinian coral undergoing natural bleaching. Marine Biotechnology, 12 (5). pp. 594-604.

Cornelius, J.P., Weber, J.C., Sotelo-Montes, C., and Ugarte-Guerra, L.J. (2010) Phenotypic correlations and site effects in a Peruvian landrace of peach palm (Bactris gasipaes Kunth). Euphytica, 173 (2). pp. 173-183.

Jones, Lynne M., Gadek, Paul A., and Harrington, Mark G. (2010) Population genetic structuring in a rare tropical plant: Idiospermum australiense (Diels) S.T. Blake. Plant Systematics and Evolution, 286 (3-4). pp. 133-139.

Edmunds, Richard C., Van Herwerden, Lynne, and Fulton, Christopher J. (2010) Population-specific locomotor phenotypes are displayed by barramundi, Lates calcarifer, in response to thermal stress. Canadian Journal of Fisheries and Aquatic Sciences, 67 (7). pp. 1068-1074.

Wallach, Arian D., Johnson, Christopher N., Ritchie, Euan G., and O'Neill, Adam J. (2010) Predator control promotes invasive dominated ecological states. Ecology Letters, 13 (8). pp. 1008-1018.

Bell, Johann, Batty, Mike, Ganachaud, Alex, Gehrke, Peter, Hobday, Alistair, Hoegh-Guldberg, Ove, Johnson, Johanna, Le Borgne, Robert, Lehodey, Patrick, Lough, Janice, Pickering, Tim, Pratchett, Morgan, Sheaves, Marcus, and Waycott, Michelle (2010) Preliminary assessment of the effects of climate change on fisheries and aquaculture in the Pacific. In: Gillett, Robert, (ed.) Fisheries in the Economies of the Pacific Island Countries and Territories. Pacific Studies Series . Asian Development Bank, Manila, Philippines, pp. 451-469.

Sale, P.F., Van Lavieren, H., Ablan Lagman, M.C., Atema, J., Butler, M., Fauvelot, C., Hogan, J.D., Jones, G.P., Lindeman, K.C., Paris, C.B., Steneck, R., and Stewart, H.L. (2010) Preserving Reef Connectivity: a Handbook for Marine Protected Area Managers. Report. Coral Reef Targeted Research &Capacity Building for Management Project (CRTR).

Luter, Heidi M., Whalan, Stephen, and Webster, Nicole S. (2010) Prevalence of tissue necrosis and brown spot lesions in a common marine sponge. Marine and Freshwater Research, 61 (4). pp. 484-489.

Page, Tony, Potrawiak, Anna, Berry, Alick, Tate, Hanington, Tungon, Joseph, and Tabi, Michael (2010) Production of sandalwood (Santalum austrocaledonicum) for improved smallholder incomes in Vanuatu. Forests, Trees and Livelihoods, 19 (3). pp. 299-316.

Lombard, C., and Leakey, R.R.B. (2010) Protecting the rights of farmers and communities while securing long term market access for producers of non-timber forest products: experience in Southern Africa. Forest, Trees and Livelihoods, 19 (3). pp. 235-249.

Pirozzi, Igor, Booth, Mark A., and Allan, Geoff L. (2010) Protein and energy utilization and the requirements for maintenance in juvenile mulloway (Argyrosomus japonicus). Fish Physiology and Biochemistry, 36 (1). pp. 109-121.

Johnson, Christopher N. (2010) Red in tooth and claw: how top predators shape terrestrial ecosystems. Journal of Animal Ecology, 79. pp. 723-725.

Catalano, Sarah R., Hutson, Kate S., Ratcliff, Rodney M., and Whittington, Ian D. (2010) Redescriptions of two species of microcotylid monogeneans from three arripid hosts in southern Australian waters. Systematic Parasitology, 76 (3). pp. 211-222.

Munday, Philip L., Dixson, Danielle L., McCormick, Mark I., Meekan, Mark, Ferrari, Maud C.O., and Chivers, Douglas P. (2010) Replenishment of fish populations is threatened by ocean acidification. Proceedings of the National Academy of Sciences of the United States of America, 107 (29). pp. 12930-12934.

Gibbs, Clinton R., Commons, Katherine H., Brown, Lawrence H., and Blake, Denise F. (2010) Sea Legs: sharpened Romberg test after three days on a live-aboard dive boat. Diving and Hyperbaric Medicine, 40 (4). pp. 189-194.

Hoey, A.S. (2010) Size matters: macroalgal height influences the feeding response of coral reef herbivores. Marine Ecology Progress Series, 411. pp. 299-302.

Cornelius, Jonathan P., Mesén, Francisco, Ohashi, Selma, Toyoko, Leão, Noemi, Silva, Claudio Emídio, Ugarte-Guerra, L. Julio, and Wightman, Kevyn E. (2010) Smallholder production of agroforestry germplasm: experiences and lessons from Brazil, Costa Rica, Mexico and Peru. Forests, Trees and Livelihoods, 19 (3). pp. 201-216.

Holmes, Thomas H., and McCormick, Mark I. (2010) Smell, learn and live: the role of chemical alarm cues in predator learning during early life history in a marine fish. Behavioural Processes, 83 (3). pp. 299-305.

Lawn, Robert (2010) Soybean variety adaptation and improvement in Vietnam and Australia (CIM/1995/130). In: Pearce, David, and Templeton, Deborah, (eds.) Adoption of ACIAR Project Outputs: Studies of projects completed in 2005–2006. ACIAR Adoption Studies . Australian Centre for International Agricultural Research, Canberra, ACT, Australia, pp. 19-24.

Welch, David J., Mapstone, Bruce D., Davies, Campbell C., and Russ, Garry R. (2010) Spatial and fishing effects on sampling gear biases in a tropical reef line fishery. Marine and Freshwater Research, 61 (10). pp. 1134-1146.

Sánchez-Argūello, Ronald, Cornejo, Aydee, Pearson, Richard G., and boyero, Luz (2010) Spatial and temporal variation of stream communities in a human-affected tropical watershed. Annales de Limnologie - International Journal of Limnology, 46 (3). pp. 149-156.

Haapkylä, J., Melbourne-Thomas, J., Flavell, M., and Willis, B.L. (2010) Spatiotemporal patterns of coral disease prevalence on Heron Island, Great Barrier Reef, Australia. Coral Reefs, 29 (4). pp. 1035-1045.

Woolley, Torres, and Buettner, Petra G. (2010) Sun protective behaviours amongst recreational boat users in northern Australia: associations with personal experience of skin cancer. Journal of Rural and Tropical Public Health, 9. pp. 31-35.

Newton, James R., Smith-Keune, Carolyn, and Jerry, Dean R. (2010) Thermal tolerance varies in tropical and sub-tropical populations of barramundi (Lates calcarifer) consistent with local adaptation. Aquaculture, 308 (Supplement 1). S128-S132.

O'Shea, Owen R,, Kingsford, Michael J., and Seymour, Jamie (2010) Tide-related periodicity of manta rays and sharks to cleaning stations on a coral reef. Marine and Freshwater Research, 61 (1). pp. 65-73.

Templeman, Michelle A., and Kingsford, Michael J. (2010) Trace element accumulation in Cassiopea sp. (Scyphozoa) from urban marine environments in Australia. Marine Environmental Research, 69 (2). pp. 63-72.

Abrantes, Kátya, and Sheaves, Marcus (2010) Use of a δ13C–δ15N relationship to determine animal trophic positions in a tropical Australian estuarine wetland. Austral Ecology, 35 (1). pp. 96-103.

Stella, J.S., Jones, G.P., and Pratchett, M.S. (2010) Variation in the structure of epifaunal invertebrate assemblages among coral hosts. Coral Reefs, 29 (4). pp. 957-973.

Koh, Lian Pin, Ghazoul, Jaboury, Butler, Rhett A, Laurance, William F., Sodhi, Navjot S., Matero-Verga, Javier, and Bradshaw, Corey J.A. (2010) Wash and spin cycle threats to tropical biodiversity. Biotropica, 42 (1). pp. 67-71.

Woolley, Torres (2010) Workplace sun protection policies could reduce skin cancer rates in genetically susceptible populations living at low latitudes. Journal of Rural and Tropical Public Health, 9. pp. 48-50.

Pirozzi, I., Booth, M.A., and Allan, G.L. (2010) The interactive effects of dietary protein and energy on feed intake, growth and protein utilization of juvenile mulloway (Argyrosomus japonicus). Aquaculture Nutrition, 16 (1). pp. 61-71.

Baker, Ron, and Sheaves, Marcus (2009) Overlooked small and juvenile piscivores dominate shallow-water estuarine "refuges" in tropical Australia. Estuarine, Coastal and Shelf Science , 85 (4). pp. 618-626.

Duckworth, Alan R., Wolff, Carsten W., and Luter, Heidi (2009) Patterns of abundance and size across varying spatial scales for the coral reef sponge Coscinoderma matthewsi. Marine Ecology Progress Series, 396. pp. 27-33.

Camus, Thomas, Zeng, Chaoshu, and McKinnon, A. David (2009) Egg production, egg hatching success and population increase of the tropical paracalanid copepod, Bestiolina similis (Calanoida: Paracalanidae) fed different microalgal diets. Aquaculture, 297 (1). pp. 169-175.

Bennett, J.M., Kutt, A.S., Johnson, C.N., and Robson, S.K.A. (2009) Ants as indicators for vertebrate fauna at a local scale: an assessment of cross-taxa surrogacy in a disturbed matrix. Biodiversity and Conservation, 18 (13). pp. 3407-3419.

Lewis, Simon L., Lloyd, Jon, Sitch, Stephen, Mitchard, Edward T.A., and Laurance, William F. (2009) Changing ecology of tropical forests: evidence and drivers. Annual Review of Ecology, Evolution, and Systematics, 40. pp. 529-549.

Zhou, Tian-Hua, Zhao, Gui-Fang, Li, Shan, and Qian, Zeng-Qiang (2009) Characterization of EST-derived microsatellite loci in Saruma henryi Oliv., an endangered Chinese endemic herb. Conservation Genetics, 1 (1). pp. 67-70.

Crozier, Ross (2009) Comments on the proposed conservation of Termes serratus Froggatt, 1898 and Termes serrula Desneux, 1904 (Insecta, Isoptera, TERMITINAE) 4 (CASE 3385). Bulletin of Zoological Nomenclature, 66 (4). p. 347.

Elmhirst, Toby, Connolly, Sean R., and Hughes, Terry P. (2009) Connectivity, regime shifts and the resilience of coral reefs. Coral Reefs, 28 (4). pp. 949-957.

Cole, Andrew J, Chong-Seng, Karen, Pratchett, Morgan S., and Jones, Geoffrey P. (2009) Coral-feeding fishes slow progression of black-band disease. Coral Reefs, 28 (4). p. 965.

Laurance, William F., and Useche, Diana C. (2009) Environmental synergisms and extinctions of tropical species. Conservation Biology, 23 (6). pp. 1427-1437.

Kenyon, Nicole, Phillott, Andrea D., and Alford, Ross A. (2009) Evaluation of the photographic identification method (PIM) as a tool to identify adult Litoria Genimaculata (anura: hylidae). Herpetological Conservation and Biology, 4 (3). pp. 403-410.

Laurance, William F., Goosem, Miriam, and Laurance, Susan G.W. (2009) Impacts of roads and linear clearings on tropical forests. Trends in Ecology & Evolution, 24. pp. 659-669.

Dong, Shan-Shan, Huang, Xuan, Qian, Zeng-Qiang, Zhou, Tian-Hua, Li, Shan, and Zhao, Gui-Fang (2009) Isolation and characterization of 14 dinucleotide microsatellite loci in the endangered herb Saruma henryi Oliv. (Aristolochiaceae). Conservation Genetics, 1 (1). pp. 221-224.

Hoey, Andrew S., and Bellwood, David R. (2009) Limited functional redundancy in a high diversity system: single species dominates key ecological process on coral reefs. Ecosystems, 12 (8). pp. 1316-1328.

Laurance, William F., and Wright, S. Joseph (2009) New insights into the tropical biodiversity crisis. Conservation Biology, 23 (6). pp. 1382-1385.

Iwai, Noriko, Pearson, Richard G., and Alford, Ross A. (2009) Shredder–tadpole facilitation of leaf litter decomposition in a tropical stream. Freshwater Biology, 54 (12). pp. 2573-2580.

Baird, Andrew H., Guest, James R., and Willis, Bette L. (2009) Systematic and biogeographical patterns in the reproductive biology of scleractinian corals. Annual Review of Ecology, Evolution, and Systematics, 40. pp. 551-571.

Ritchie, S.A., Rapley, L.P. , Williams, C., Johnson, P.H., Larkman, M., Silcock, R.M., Long, S.A., and Russell, R.C. (2009) A lethal ovitrap-based mass trapping scheme for dengue control in Australia: I. Public acceptability and performance of lethal ovitraps. Medical and Veterinary Entomology, 23 (4). pp. 295-302.

Johnson, Christopher (2009) Megafaunal decline and fall. Science, 326. pp. 1072-1073.

Grainger, Alan, Boucher, Douglas H., Frumhoff, Peter C., Laurance, William F., Lovejoy, Thomas, McNeely, Jeffrey, Niekisch, Manfred, Raven, Peter, Sodhi, Navjot S., Venter, Oscar, and Pimm, Stuart L. (2009) Biodiversity and REDD at Copenhagen. Current Biology, 19 (21). pp. 974-976.

Williams, Stephen, Williams, Yvette M., VanDerWal, Jeremy, Isaac, Joanne L., Shoo, Luke P., and Johnson, Christopher N. (2009) Ecological specialization and population size in a biodiversity hotspot: how rare species avoid extinction. Proceedings of the National Academy of Sciences, 106. pp. 19737-19741.

Venter, Oscar, Laurance, William F., Iwamura, Takuya, Wilson, Kerrie A., Fuller, Richard A., and Possingham, Hugh P. (2009) Harnessing carbon payments to protect biodiversity. Science, 326 (5958). p. 1368.

Flint, Mark, Patterson-Kane, Janet C., Limpus, Colin J., Work, Thierry M., Blair, David, and Mills, Paul C. (2009) Postmortem diagnostic investigation of disease in free-ranging marine turtle populations: a review of common pathologic findings and protocols. Journal of Veterinary Diagnostic Investigation, 21 (6). pp. 733-759.

Gusmão, Luiz Felipe Mendes, and McKinnon, A. David (2009) The effect of food type and quantity on egg production and nucleic acid content of Acartia sinjiensis. Aquaculture, 296 (1-2). pp. 71-80.

Coker, Darren J., Pratchett, Morgan S., and Munday, Philip L. (2009) Coral bleaching and habitat degradation increase susceptibility to predation for coral-dwelling fishes. Behavioral Ecology, 20 (6). pp. 1204-1210.

Bonin, Mary C., Munday, Philip L., McCormick, Mark I., Srinivasan, Maya, and Jones, Geoffrey P. (2009) Coral-dwelling fishes resistant to bleaching but not to mortality of host corals. Marine Ecology Progress Series, 394. pp. 215-222.

Craven, Andrea, Carton, Alexander G., McPherson, Craig, and McPherson, Geoff (2009) Determining and quantifying components of an aquaculture soundscape. Aquacultural Engineering, 41 (3). pp. 158-165.

Hoogenboom, Mia O., Connolly, Sean R., and Anthony, Kenneth R.N. (2009) Effects of photoacclimation on the light niche of corals: a process-based approach. Marine Biology, 156 (12). pp. 2493-2503.

Krajewski, João Paulo (2009) How do follower reef fishes find nuclear fishes? Environmental Biology of Fishes, 86 (3). pp. 379-387.

McMahon, K.M., and Waycott, M. (2009) New record for Halophila decipiens Ostenfeld in Kenya based on morphological and molecular evidence. Aquatic Botany, 91 (4). pp. 318-320.

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Kosnik, Mathew, Hua, Quan, Kaufman, Darrell S., and Wust, Raphael A. (2009) Taphonomic bias and time-averaging in tropical molluscan death assemblages: differential shell half-lives in Great Barrier Reef sediment. Paleobiology, 35 (4). pp. 565-586.

Parsons, Scott, Shoo, Luke P., and Williams, Stephen (2009) Volume measurements for quicker determination of forest litter standing crop. Journal of Tropical Ecology, 25 (6). pp. 665-669.

Scardino, A.J., Zhang, H., Cookson, D.J, Lamb, R.N, and de Nys, R. (2009) The role of nano-roughness in antifouling. Biofouling, 25 (8). pp. 757-767.

Voyles, Jamie L., Young, Samantha, Berger, Lee, Campbell, Craig, Voyles, Wyatt F, Dinudom, Anuwat, Cook, David, Webb, Rebecca, Alford, Ross A., Skerratt, Lee F., and Speare, Richard (2009) Pathogenesis of chytridiomycosis, a cause of catastrophic amphibian declines. Science, 326 (5952). pp. 582-585.

Rader, Romina, Howlett, Bradley G., Cunningham, Saul A., Westcott, David, Newstrom-Lloyd, Linda E., Walker, Melanie K., Teulon, David A.J., and Edwards, Will (2009) Alternative pollinator taxa are equally efficient but not as effective as the honeybee in a mass flowering crop. Journal of Applied Ecology, 46 (5). pp. 1080-1087.

Qian, Zeng-Qiang, Crozier, Y. Ching, Schlick-Steiner, Birgit C., Steiner, Florian M., and Crozier, Ross H. (2009) Characterization of expressed sequence tag (EST)-derived microsatellite loci in the fire ant Solenopsis invicta (Hymenoptera: Formicidae). Conservation Genetics, 10 (5). pp. 1373-1376.

Bellwood, David R., and Meyer, Christopher P. (2009) Endemism and evolution in the Coral Triangle: a call for clarity. Journal of Biogeography, 36 (10). pp. 2010-2012.

Van Van, Kim, Dalsgaard, Anders, Blair, David, and Hoa Le, Thanh (2009) Haplorchis pumilio and H. taichui in Vietnam discriminated using ITS-2 DNA sequence data from adults and larvae. Experimental Parasitology, 123 (2). pp. 146-151.

Paton, D.C., Rogers, D.J., Hill, B.M., Bailey, C.P., and Ziembicki, M. (2009) Temporal changes to spatially stratified waterbird communities of the Coorong, South Australia: implications for the management of heterogenous wetlands. Animal Conservation, 12 (5). pp. 408-417.

van Herwerden, Lynne, Aspden, William J., Newman, Stephen J., Pegg, Graham G., Briskey, Leica, and Sinclair, William (2009) A comparison of the population genetics of Lethrinus miniatus and Lutjanus sebae from the east and west coasts of Australia: evidence for panmixia and isolation. Fisheries Research, 100 (2). pp. 148-155.

Walker, Stefan P.W., and McCormick, Mark I. (2009) Sexual selection explains sex-specific growth plasticity and positive allometry for sexual size dimorphism in a reef fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3335-3343.

McCormick, Mark I. (2009) Behaviourally Mediated Phenotypic Selection in a Disturbed Coral Reef Environment. PLoS ONE, 4 (9). p. 7096.

Stockwell, Brian, Jadloc, Claro Renato L., Abesamis, Rene A., Alcala, Angel C., and Russ, Garry R. (2009) Trophic and benthic responses to no-take marine reserve protection in the Philippines. Marine Ecology Progress Series, 389. pp. 1-15.

Gusmão, Luiz Felipe Mendes, and McKinnon, A. David (2009) Acrocalanus gracilis (Copepoda: Calanoida) development and production in the Timor Sea. Journal of Plankton Research, 31 (9). pp. 1089-1100.

Cooper, T.F., Gilmour, J.P., and Fabricius, K.E. (2009) Bioindicators of changes in water quality on coral reefs: review and recommendations for monitoring programmes. Coral Reefs, 28 (3). pp. 589-606.

Edmunds, Richard C., Hillersøy, Grethe, Momigliano, Paolo, and Van Herwerden, Lynne (2009) Classic approach revitalizes genomics: complete characterization of a candidate gene for thermal adaptation in two coral reef fishes. Marine Genomics, 2 (3-4). pp. 215-222.

Cowman, Peter F., Bellwood, David R., and van Herwerden, Lynne (2009) Dating the evolutionary origins of wrasse lineages (Labridae) and the rise of trophic novelty on coral reefs. Molecular Phylogenetics and Evolution, 52 (3). pp. 621-631.

Doerr, Natalie R. (2009) Do male Great Bowerbirds (Ptilonorhynchus nuchalis) minimise the costs of acquiring bower decorations by reusing decorations acquired in previous breeding seasons? Emu: austral ornithology, 109 (3). pp. 237-243.

Munday, Philip L., Donelson, Jennifer M., Dixson, Danielle L. , and Endo, Geoff G.K. (2009) Effects of ocean acidification on the early life history of a tropical marine fish. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1671). pp. 3275-3283.

Lemberget, T., McCormick, M.I., and Wilson, D.T. (2009) Environmental influences on the replenishment of lizardfish (family Synodontidae) in Caribbean Panama. Coral Reefs, 28 (3). pp. 737-750.

DeGabriel, Jane L., Moore, Ben D., Shipley, Lisa A., Krockenberger, Andrew K., Wallis, Ian R., Johnson, Christopher N., and Foley, William J. (2009) Inter-population differences in the tolerance of a marsupial folivore to plant secondary metabolites. Oecologia, 161 (3). pp. 539-548.

Camacho , Regina, Boyero, Luz, Cornejo, Aydee, Ibanez, Alicia, and Pearson, Richard G. (2009) Local variation in shredder distribution can explain their oversight in tropical streams. Biotropica, 41 (5). pp. 625-632.

Schluns, Helge, and Crozier, Ross H. (2009) Molecular and chemical immune defenses in ants (Hymenoptera: Formicidae). Myrmecological News, 12. pp. 237-249.

Gotelli, Nicholas J., Anderson, Marti J., Hector, T. Arita, Chao, Anne, Colwell, Robert K., Connolly, Sean R., Currie, David J., Dunn, Robert R., Graves, Gary R., Green, Jessica L., Grytnes, John-Arvid, Jiang, Yi-Huei, Jetz, Walter, Lyons, S. Kathleen, McCain, Christy M., Magurran, Anne E., Rahbek, Carsten, Rangel, Thiago F.L.V.B., Soberón, Jorge, Webb, Campbell O., and Willig, Michael R. (2009) Patterns and causes of species richness: a general simulation model for macroecology. Ecology Letters, 12 (9). pp. 873-886.

Barton, Diane P., Beaufrere, Charles, Justine, Jean-Lou, and Whittington, Ian D (2009) Polyopisthocotylean monogeneans from carangid fishes off Queensland, Australia and New Caledonia, with a description of Heteromicrocotyloides megaspinosus sp. nov. Acta Parasitologica, 54 (3). pp. 205-217.

Ritchie, Euan G., and Johnson, Christopher N. (2009) Predator interactions, mesopredator release and biodiversity conservation. Ecology Letters, 12 (9). pp. 982-998.

Hobbs, J-P.A., Frisch, A.J., Hamanaka, T., McDonald, C.A., Gilligan, J.J., and Neilson, J. (2009) Seasonal aggregation of juvenile whale sharks (Rhincodon typus) at Christmas Island, Indian Ocean. Coral Reefs, 28 (3). p. 577.

Gusmão, Luiz Felipe Mendes, and McKinnon, A. David (2009) Sex ratios, intersexuality and sex change in copepods. Journal of Plankton Research, 31 (9). pp. 1101-1117.

Abrantes, Kátya, and Sheaves, Marcus (2009) Sources of nutrition supporting juvenile penaeid prawns in an Australian dry tropics estuary. Marine and Freshwater Research, 60 (9). pp. 949-959.

Doerr, Natalie R. (2009) Stealing rates in the Great Bowerbird (Ptilonorhynchus nuchalis): effects of the spatial arrangement of males and availability of decorations. Emu: aust, 109 (3). pp. 230-236.

Nguyen, Thuy T.T., Davy, F. Brian, Rimmer, Michael A., and De Silva, Sena S. (2009) Use and exchange of genetic resources of emerging species for aquaculture and other purposes. Reviews in Aquaculture, 1 (3-4). pp. 260-274.

Pirozzi, Igor, and Booth, Mark A. (2009) The effect of temperature and body weight on the routine metabolic rate and postprandial metabolic response in mulloway, Argyrosomus japonicus. Comparative Biochemistry and Physiology - Part A: Molecular and Integrative Physiology, 154 (1). pp. 110-118.

Leakey, Roger (2009) Multifunctional agriculture and agroforestry. In: Proceedings of the World Congress of Agroforestry 2009, pp. 1-44. From: World Congress of Agroforestry 2009, 23 - 28 August 2009, Nairobi, Kenya.

Sato, Yui, Bourne, David G., and Willis, Bette L. (2009) Dynamics of seasonal outbreaks of black band disease in an assemblage of Montipora species at Pelorus Island (Great Barrier Reef, Australia). Proceedings of the Royal Society of London Series B, 276. pp. 2795-2803.

Llewelyn, John, Webb, Jonathan K., Schwarzkopf, Lin, Alford, Ross, and Shine, Richard (2009) Behavioural responses of carnivorous marsupials (Planigale maculata) to toxic invasive cane toads (Bufo marinus). Austral Ecology, 35 (5). pp. 560-567.

Fernandez-Jover, Damian, Sanchez-Jerez, Pablo, Bayle-Sempere, Just T, Arechavala-Lopez, Pablo, Martinez-Rubio, Laura, Lopez Jimenez, Jose Angel, and Javier Martinez Lopez, Francisco (2009) Coastal fish farms are settlement sites for juvenile fish. Marine Environmental Research, 68 (2). pp. 89-96.

Macedonia, Joseph M., Lappin, A. Kristopher, Loew, Ellis R., McGuire, Jimmy A., Hamilton, Paul S., Plasman, Melissa, Brandt, Yoni, Lemos-Espinal, Julio A., and Kemp, Darrell J. (2009) Conspicuousness of Dickerson’s collared lizard (Crotaphytus dickersonae) through the eyes of conspecifics and predators. Biological Journal of the Linnean Society, 97 (4). pp. 749-765.

Visser, Renee L., Watson, James E.M., Dickman, Chris R., Southgate, Rick, Jenkins, David, and Johnson, Christopher N. (2009) Developing a national framework for Dingo trophic regulation research in Australia: outcomes of a national workshop. Ecological Management and Restoration, 10 (2). pp. 168-170.

Watson, Sue-Ann, Southgate, Paul C., Tyler, Paul A., and Peck, Lloyd (2009) Early larval development of the Sydney rock oyster Saccostrea glomerata under near-future predictions of CO2 driven ocean acidification. Journal of Shellfish Research, 28 (3). pp. 431-437.

Slater, Matthew J., and Carton, Alexander G. (2009) Effect of sea cucumber (Australostichopus mollis) grazing on coastal sediments impacted by mussel farm deposition. Marine Pollution Bulletin, 58 (8). pp. 1123-1129.

Holme, May-Helen, Brock, Ian, Southgate, Paul C., and Zeng, Chaoshu (2009) Effects of starvation and feeding on lipid class and fatty acid profile of late stage mud crab, Scylla serrata, larvae. Journal of the World Aquaculture Society, 40 (4). pp. 493-504.

Kroon, F.J., Munday, P.L., and Westcott, D.A. (2009) Equivalent whole-body concentrations of 11-ketotestosterone in female and male coral goby (Gobiodon erythrospilus), a bi-directional sex-changing fish. Journal of Fish Biology, 75 (3). pp. 685-692.

Carter, A.B., Williams, A.J., and Russ, G.R. (2009) Increased accuracy of batch fecundity estimates using oocyte stage ratios in Plectropomus leopardus. Journal of Fish Biology, 75 (3). pp. 716-722.

Munday, Philip L., Crawley, Natalie, and Nilsson, Göran E. (2009) Interacting effects of elevated temperature and ocean acidification on the aerobic performance of coral reef fishes. Marine Ecology Progress Series, 388. pp. 235-242.

Edwards, Will, Whytlaw, Poppy, Congdon, Bradley C., and Gaskett, Chris (2009) Is optimal foraging a realistic expectation in orb-web spiders? Ecological Entomology, 34 (4). pp. 527-534.

Neaves, Linda E., Zenger, Kyall R., Prince, Robert I.T., Eldridge, Mark D.B., and Cooper, Desmond W. (2009) Landscape discontinuities influence gene flow and genetic structure in a large, vagile Australian mammal, Macropus fuliginosus. Molecular Ecology, 18 (16). pp. 3363-3378.

Newey, P., Robson, S.K.A., and Crozier, R.H. (2009) Nest and colony-specific spectra in the weaver ant Oecophylla smaragdina. Insectes Sociaux, 56 (3). pp. 261-268.

Abrego, David A., van Oppen, Madeleine J.H., and Willis, Bette L. (2009) Onset of algal endosymbiont specificity varies among closely related species of Acropora corals during early ontogeny. Molecular Ecology, 18 (16). pp. 3532-3543.

Baker, Ron, and Sheaves, Marcus (2009) Refugees or ravenous predators: detecting predation on new recruits to tropical estuarine nurseries. Wetlands Ecology and Management, 17 (4). pp. 317-330.

Mamangkey, N. Gustaf F., and Southgate, Paul C. (2009) Regeneration of excised mantle tissue by the silver-lip pearl oyster, Pinctada maxima (Jameson). Fish and Shellfish Immunology, 27 (2). pp. 164-174.

Wu, Xugan, Cheng, Yongxu, Zeng, Chaoshu, Liying, Sui, Southgate, Paul, Zhou, Gang, and Bian, Wenji (2009) Reproductive performance and offspring quality of Chinese mitten crab Eriocheir sinensis (H. Milne-Edwards) females fed an optimized formulated diet and the razor clam Sinonovacula constricta. Aquaculture Research, 40 (12). pp. 1335-1349.

Laurance, William (2009) Roads to ruin. New Scientist, 2723. pp. 24-25.

Waycott, Michelle, Duarte, Carlos M., Carruthers, Tim J.B., Orth, Robert J., Dennison, William C., Olyarnik, Suzanne, Calladine, Ainsley, Fourqurean, James W., Heck Jr., Kenneth L., Hughes, A. Randall, Kendrick, Gary A., Kenworthy, W. Judson, Short, Frederick T, and Williams, Susan L. (2009) Accelerating loss of seagrasses across the globe threatens coastal ecosystems. Proceedings of the National Academy of Sciences, 106 (30). pp. 12377-12381.

Zhou, Yan, Zheng, Huajun, Chen, Yangyi, Zhang, Lei, Wang, Kai, Guo, Jing, Huang, Zhen, Guo, Jing, Huang, Zhen, Zhang, Bo, Huang, Wei, Jin, Ke, Dou, Tonghai, Hasegawa, Masami, Wang, Li, Zhang, Yuan, Zhou, Jie, Tao, Lin, Cao, Zhiwei, Li, Yixue, Vinar, Tomas, Brejova, Brona, Brown, Dan, Li, Ming, Miller, David, Blair, David, Zhong, Yang, Chen, Zhu, Liu, Feng, Hu, Wei, Wang, Zhi-Qin, Zhang, Qin-Hua, Song, Huai-Dong, Chen, Saijuan, Xu, Xuenian, Xu, Bin, Ju, Chuan, Huang, Yucheng, Brindley, Paul, McManus, Donald, Feng, Zheng, Han, Ze-Guang, Lu, Gang, Ren, Shuangxi, Wang, Yuezhu, Wenyi, Gu, Kang, Hui, Chen, Jie, Cheng, Xiaoyun, Chen, Shuting, Wang, Lijun, Yan, Jie, Wang, Biyun, Lv, Zinyan, Jin, Lei, Wang, Bofei, Pu, Shiyin, Zhang, Xianglin, Zhang, Wei, Hu, Qiuping, Zhu, Genfeng, Wang, Jun, Yu, Jun, Wang, Jian, Yang, Huamming, Ning, Zemin, Beriman, Matthew, Wei, Chia-Lin, Ruan, Yijuan, Zhao, Guoping, and Wang, Shengyue (2009) The Schistosoma japonicum genome reveals features of host–parasite interplay. Nature, 460. pp. 345-352.

Slater, Matthew J., Jeffs, Andrew G., and Carton, Alexander G. (2009) The use of the waste from green-lipped mussels as a food source for juvenile sea cucumber, Australostichopus mollis. Aquaculture, 292 (3-4). pp. 219-224.

Winter, Klaus, Garcia, Milton, and Holtum, Joseph A.M. (2009) Canopy CO2 exchange of two neotropical tree species exhibiting constitutive and facultative CAM photosynthesis, Clusia rosea and Clusia cylindrica. Journal of Experimental Botany, 60 (11). pp. 3167-3177.

van Herwerden, Lynne, Choat, J. Howard, Newman, Stephen J., Leray, Mattieu, and Hillersoy, Grethe (2009) Complex patterns of population structure and recruitment of Plectropomus leopardus (Pisces: Epinephelidae) in the Indo-West Pacific: implications for fisheries management. Marine Biology, 156 (8). pp. 1595-1607.

Devney, Carol A., Short, Michael, and Congdon, Bradley C. (2009) Cyclonic and anthropogenic influences on tern populations. Wildlife Research, 36 (5). pp. 368-378.

Johnson, Christopher N. (2009) Ecological consequences of Late Quaternary extinctions of megafauna. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1667). pp. 2509-2519.

Guy, Jeffrey A., Jerry, Dean R., and Rowland, Stuart J. (2009) Heterosis in fingerlings from a diallel cross between two wild strains of silver perch (Bidyanus bidyanus). Aquaculture Research, 40 (11). pp. 1291-1300.

Gagliano, Monica, and McCormick, Mark I. (2009) Hormonally mediated maternal effects shape offspring survival potential in stressful environments. Oecologia, 160 (4). pp. 657-665.

Brierley, Andrew S., and Kingsford, Michael J. (2009) Impacts of climate change on marine organisms and ecosystems. Current Biology, 19 (14). R602-R614.

Bay, Line K., Ulstrup, Karin E., Nielsen, H. Bjorn, Jarmer, Hanne, Goffard, Nicolas, Willis, Bette L., Miller, David J., and van Oppen, Madeleine J.H. (2009) Microarray analysis reveals transcriptional plasticity in the reef building coral Acropora millepora. Molecular Ecology, 18 (14). pp. 3062-3075.

Goodman, B.A. (2009) Nowhere to run: the role of habitat openness and refuge use in defining patterns of morphological and performance evolution in tropical lizards. Journal of Evolutionary Biology, 22 (7). pp. 1535-1544.

Jiang, Ling-Yan, Qian, Zeng-Qiang, Guo, Zhi-Gang, Wang, Chong, and Zhao, Gui-Fang (2009) Polyploid origins in Gynostemma pentaphyllum (Cucurbitaceae) inferred from multiple gene sequences. Molecular Phylogenetics and Evolution, 52 (1). pp. 183-191.

Ritchie, Euan, Martin, Jennifer K., Johnson, Christopher N., and Fox, Barry J. (2009) Separating the influences of environment and species interactions on patterns of distribution and abundance: competition between large herbivores. Journal of Animal Ecology, 78 (4). pp. 724-731.

Mieog, Jos C., Olsen, Jeanine L., Berkelmans, Ray, Bleuler-Martinez, Silvia A., Willis, Bette L., and van Oppen, Madeleine J.H. (2009) The roles and interactions of symbiont, host and environment in defining coral fitness. PLoS ONE, 4 (7). p. 6364.

Cooper, Timothy F., and Ulstrup, Karin E. (2009) Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient. Estuarine, Coastal and Shelf Science , 83 (2). pp. 186-196.

Boyle, M.C., FitzSimmons, N.N., Limpus, C.J., Kelez, S., Velez-Zuazo, X., and Waycott, M. (2009) Evidence for transoceanic migrations by loggerhead sea turtles in the southern Pacific Ocean. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1664). pp. 1993-1999.

Winter, Kelly L., Isbister, Geoffrey K., Jacoby, Tamara, Seymour, Jamie E., and Hodgson, Wayne C. (2009) An in vivo comparison of the efficacy of CSL box jellyfish antivenom with antibodies raised against nematocyst-derived Chironex fleckeri venom. Toxicology Letters, 187 (2). pp. 94-98.

Boyero, Luz, Ramirez, Alonso, Dudgeon, David, and Pearson, Richard G. (2009) Are tropical streams really different? Journal of the North American Benthological Society, 28 (2). pp. 397-403.

Hughes, A. Randall, Williams, Susan L., Duarte, Carlos M., Heck Jr, Kenneth L., and Waycott, Michelle (2009) Associations of concern: declining seagrasses and threatened dependent species. Frontiers in Ecology and the Environment, 7 (5). pp. 242-246.

Munday, P.L., Leis, J.M., Lough, J.M., Paris, C.B., Kingsford, M.J., Berumen, M.L., and Lambrechts, J. (2009) Climate change and coral reef connectivity. Coral Reefs, 28 (2). pp. 379-395.

Botsford, L.W., White, J.W., Coffroth, M-A., Paris, C.B., Planes, S., Shearer, T.L., Thorrold, S.R., and Jones, G.P. (2009) Connectivity and resilience of coral reef metapopulations in marine protected areas: matching empirical efforts to predictive needs. Coral Reefs, 28 (2). pp. 327-337.

Almany, G.R., Connolly, S.R., Heath, D.D., Hogan, J.D., Jones, G.P., McCook, L.J., Mills, M., Pressey, R.L., and Williamson, D.H. (2009) Connectivity, biodiversity conservation and the design of marine reserve networks for coral reefs. Coral Reefs, 28 (2). pp. 339-351.

Raina, Jean-Baptiste, Tapiolas, Dianne, Willis, Bette L., and Bourne, David G. (2009) Coral-associated bacteria and their role in the biogeochemical cycling of sulfur. Applied and Environmental Microbiology, 75 (11). pp. 3492-3501.

Sheaves, Marcus, and Johnston, Ross (2009) Ecological drivers of spatial variability among fish fauna of 21 tropical Australian estuaries. Marine Ecology Progress Series, 385. pp. 245-260.

Johnson, Chris N., and VanDerWal, Jeremy (2009) Evidence that dingoes limit abundance of a mesopredator in eastern Australian forests. Journal of Applied Ecology, 46 (3). pp. 641-646.

Bozzano, Anna, Pankhurst, Patricia M., Moltschaniwskyj, Natalie A., and Villanueva, Roger (2009) Eye development in southern calamary, Sepioteuthis australis, embryos and hatchlings. Marine Biology, 156 (7). pp. 1359-1373.

Li, Miao-Miao, Cai, Yu-Liang, Qian, Zeng-Qiang, and Zhao, Gui-Fang (2009) Genetic diversity and differentiation in Chinese sour cherry Prunus pseudocerasus Lindl., and its implications for conservation. Genetic Resources and Crop Evolution, 56 (4). pp. 455-464.

Smith-Keune, Carolyn, and Jerry, Dean R. (2009) High levels of intra-specific variation in the NG repeat region of the Pinctada maxima N66 organic matrix protein. Aquaculture Research, 40 (9). pp. 1054-1063.

Cantin, N.E., van Oppen, M.J.H., Willis, B.L., Mieog, J.C., and Negri, A.P. (2009) Juvenile corals can acquire more carbon from high-performance algal symbionts. Coral Reefs, 28 (2). pp. 405-414.

Jones, G.P., Almany, G.R., Russ, G.R., Sale, P.F., Steneck, R.S., Van Oppen, M.J.H., and Willis, B.L. (2009) Larval retention and connectivity among populations of corals and reef fishes: history, advances and challenges. Coral Reefs, 28 (2). pp. 307-325.

Gonzalez Cabello, Alonso, and Bellwood, David R. (2009) Local ecological impacts of regional biodiversity on reef fish assemblages. Journal of Biogeography, 36 (6). pp. 1129-1137.

McCook, L.J., Almany, G.R., Berumen, M.L., Day, J.C., Green, A.L., Jones, G.P., Leis, J.M., Planes, S., Russ, G.R., Sale, P.F., and Thorrold, S.R. (2009) Management under uncertainty: guide-lines for incorporating connectivity into the protection of coral reefs. Coral Reefs, 28 (2). pp. 353-366.

Goatley, Christopher, and Bellwood, David R. (2009) Morphological structure in a reef fish assemblage. Coral Reefs, 28 (2). pp. 1-9.

Edwards, Will, and Moles, Angela T. (2009) Re-contemplate an entangled bank: the "Power of Movement in Plants" revisited. Botanical Journal of the Linnean Society, 160 (2). pp. 111-118.

Yule, Catherine M., Leong, Mun Yi, Liew, Kong Cheng, Ratnarajah, Lavenia, Schmidt, Katrin, Wong, Hooi Ming, Pearson, Richard G., and Boyero, Luz (2009) Shredders in Malaysia: abundance and richness are higher in cool upland tropical streams. Journal of the North American Benthological Society, 28 (2). pp. 404-415.

Devney, Carol A., and Congdon, Bradley C. (2009) Testing the efficacy of a boundary fence at an important tropical seabird breeding colony and key tourist destination. Wildlife Research, 36 (4). pp. 353-360.

Jones, G.P., Russ, G.R., Sale, P.F., and Steneck, R.S. (2009) Theme section on “Larval connectivity, resilience and the future of coral reefs”. Coral Reefs, 28 (2). pp. 303-305.

Steneck, R.S., Paris, C.B., Arnold, S.N., Ablan-Lagman, M.C., Alcala, A.C., Butler, M.J., McCook, L.J., Russ, G.R., and Sale, P.F. (2009) Thinking and managing outside the box: coalescing connectivity networks to build region-wide resilience in coral reef ecosystems. Coral Reefs, 28 (2). pp. 367-378.

Bromage, Erin, and Owens, Leigh (2009) Environmental factors affecting the susceptibility of barramundi to Streptococcus iniae. Aquaculture, 290 (3-4). pp. 224-228.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Effects of coral bleaching on the feeding response of two species of coral-feeding fish. Journal of Experimental Marine Biology and Ecology, 373. pp. 11-15.

Feary, David A., McCormick, Mark I., and Jones, Geoffrey P. (2009) Growth of reef fishes in response to live coral cover. Journal of Experimental Marine Biology and Ecology, 373 (1). pp. 45-49.

Meyer, Eli, Aglyamova, Galina V., Wang, Shi, Buchanan-Carter, Jade, Abrego, David, Colbourne, John K., Willis, Bette L., and Matz, Mikhail V. (2009) Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx. BMC Genomics, 10 (219). pp. 1-18.

Kassahn, Karin S., Crozier, Ross H., Pörtner, Hans O., and Caley, M. Julian (2009) Animal performance and stress: responses and tolerance limits at different levels of biological organisation. Biological Reviews, 84 (2). pp. 277-292.

Parsons, Jennifer G., Blair, David, Luly, Jon, and Robson, Simon K.A. (2009) Bat strikes in the Australian aviation industry. Journal of Wildlife Management, 73 (4). pp. 526-529.

Hoegh-Guldberg, Ove, Hoegh-Guldberg, Hans, Veron, John E., Green, Alison, Gomez, Edgardo D., Lough, Janice, King, Melanie, Ambariyanto , Dr., Hansen, Lara, Cinner, Josh, Dews, Geoff, Russ, Garry, Schuttenberg, Heidi Z., Peñaflor, Eileen L., Eakin, C. Mark, Christensen, Tyler R.L., Abbey, Michael, Areki, Francis, Kosako, Rosemary A., Tewfik, Alexander , and Oliver, Jamie (2009) The Coral Triangle and Climate Change: ecosystems, people and societies at risk. Report. WWF Australia, Sydney, NSW, Australia.

Puschendorf, Robert, Carnaval, Ana C., VanDerWal, Jeremy, Zumbado-Ulate, Héctor, Chaves, Gerardo, Bolaños, Federico, and Alford, Ross A. (2009) Distribution models for the amphibian chytrid Batrachochytrium dendrobatidis in Costa Rica: proposing climatic refuges as a conservation tool. Diversity and Distributions, 15 (3). pp. 401-408.

Littman, Raechel A., Willis, Bette L., Pfeffer, Christian, and Bourne, David G. (2009) Diversities of coral-associated bacteria differ with location, but not species, for three acroporid corals on the Great Barrier Reef. FEMS Microbiology Ecology, 68 (2). pp. 152-163.

Isaac, Joanne L. (2009) Effects of climate change on life history: implications for extinction risk in mammals. Endangered Species Research, 7 (2). pp. 115-123.

Abrantes, Kátya, and Sheaves, Marcus (2009) Food web structure in a near-pristine mangrove area of the Australian Wet Tropics. Estuarine, Coastal and Shelf Science, 82 (4). pp. 597-607.

McCormick, Mark I. (2009) Indirect effects of heterospecific interactions on progeny size through maternal stress. Oikos, 118 (5). pp. 744-752.

Buerki, Sven, Forest, Felix, Acevedo-Rodriguez, Pedro, Callmander, Martin W., Nylander, Johan A.A., Harrington, Mark, Sanmartin, Isabel, Kupfer, Philippe, and Alvarez, Nadir (2009) Plastid and nuclear DNA markers reveal intricate relationships at subfamilial and tribal levels in the soapberry family (Sapindaceae). Molecular Phylogenetics and Evolution, 51 (2). pp. 238-258.

Pratchett, M.S., Schenk, T.J., Baine, M., Syms, C., and Baird, A.H. (2009) Selective coral mortality associated with outbreaks of Acanthaster planci L. in Bootless Bay, Papua New Guinea. Marine Environmental Research, 67 (4-5). pp. 230-236.

Devney, Carol, Short, Michael, and Congdon, Bradley C. (2009) Sensitivity of tropical seabirds to El Nino precursors. Ecology, 90 (5). pp. 1175-1183.

Romano, Nicholas, and Zeng, Chaoshu (2009) Subchronic exposure to nitrite, potassium and their combination on survival, growth, total haemocyte count and gill structure of juvenile blue swimmer crabs, Portunus pelagicus. Ecotoxicology and Environmental Safety, 72 (4). pp. 1287-1295.

Konstantakopoulos, Nicki, Isbister, Geoffrey K., Seymour, Jamie E., and Hodgson, Wayne C. (2009) A cell-based assay for screening of antidotes to, and antivenom against Chironex fleckeri (box jellyfish) venom. Journal of Pharmacological and Toxicological Methods, 59 (3). pp. 166-170.

Anderson, Kylie L., Sallam, Nader, and Congdon, Bradley C. (2009) The effect of host structure on the distribution and abundance of the island sugarcane planthopper, Eumetopina flavipes Muir, vector of Ramu stunt disease of sugarcane. Virus Research, 141 (2). pp. 247-257.

Robson, Simon K.A., and Crozier, Ross H. (2009) An evaluation of two biochemical methods of age determination in insects (pteridines and lipofuscins) using the ant Polyrhachis sexpinosa Latrielle (Hymenoptera: Formicidae). Australian Journal of Entomology, 48 (2). pp. 102-106.

Goodman, Brett A., Hudson, Simon C., Isaac, Joanne, and Schwarzkopf, Lin (2009) The evolution of body shape in response to habitat: is reproductive output reduced in flat lizards? Evolution: international journal of organic evolution, 63 (5). pp. 1279-1291.

de Nys, R., and Guenther, J. (2009) The impact and control of biofouling in marine finfish aquaculture. In: Hellio, Claire, and Yebra, Diego, (eds.) Advances in Marine Antifouling Coatings and Technologies. Woodhead Publishing, Cambridge,UK, pp. 177-221.

Hobbs, Jean-Paul A., Frisch, Ashley J., Allen, Gerald R., and van Herwerden, Lynne (2009) Marine hybrid hotspot at Indo-Pacific biogeographic border. Biology Letters, 5 (2). pp. 258-261.

Donelson, Jennifer M., Munday, Philip L., and McCormick, Mark I. (2009) Parental effects on offspring life histories: when are they important? Biology Letters, 5 (2). pp. 262-265.

Romano, Nicholas, and Zeng, Chaoshu (2009) Evaluating the newly proposed protocol of incorporated potassium in nitrate toxicity experiments at different salinities: a case study with the tiger prawn, Penaeus monodon, juveniles. Aquaculture, 289 (3). pp. 304-309.

Moritz, C., Hoskin, C.J., MacKenzie, J.B., Phillips, B.L., Tonione, M., Silva, N., VanDerWal, Jeremy, Williams, S.E., and Graham, C.H. (2009) Identification and dynamics of a cryptic suture zone in tropical rainforest. Proceedings of the Royal Society of London Series B, Biological Sciences, 276 (1660). pp. 1235-1244.

Planes, Serge, Jones, Geoffrey P., and Thorrold, Simon R. (2009) Larval dispersal connects fish populations in a network of marine protected areas. Proceedings of the National Academy of Sciences, 106 (14). pp. 5693-5697.

Christidis, Faye (2009) Riekophlebia crocina, a new genus and species of Atalophlebiinae (Ephemeroptera: Leptophlebiidae) from the Wet Tropics bioregion of north-eastern Australia. Zootaxa, 2063. pp. 64-68.

Lober, Malwine, and Zeng, Chaoshu (2009) Effect of microalgae concentration on larval survival, development and growth of an Australian strain of giant freshwater prawn Macrobrachium rosenbergii. Aquaculture, 289 (1). pp. 95-100.

Heimann, Kirsten, and Katsaros, Christos (2009) Algal cell biology and genomics. Botanica Marina, 52. pp. 93-94.

Williams, Paul R. (2009) Contrasting demographics of tropical savanna and temperate forest eucalypts provide insight into how savannas and forests function. A case study using Corymbia clarksoniana from north-eastern Australia. Austral Ecology, 34 (2). pp. 120-131.

Williams, Paul, and Collette, Andrew (2009) Control of the exotic Para Grass allows the expansion of the rare native wetland grass Paspalidium udum in a north Queensland wetland. Ecological Management and Restoration, 10 (1). pp. 60-61.

Nankervis, L., and Southgate, P.C. (2009) Enzyme and acid treatment of fish meal for incorporation into formulated microbound diets for barramundi (Lates calcarifer) larvae. Aquaculture Nutrition, 15 (2). pp. 135-143.

Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., and Planes, S. (2009) Estimating connectivity in marine populations: an empirical evaluation of assignment tests and parentage analysis under different gene flow scenarios. Molecular Ecology, 18 (8). pp. 1765-1776.

Milione, Michael, and Harding, Elaine (2009) Habitat use by platypus (Ornithorhynchus anatinus) in a modified Australian Wet Tropics catchment, north-eastern Queensland. Australian Mammalogy, 31 (1). pp. 35-46.

Heimann, Kirsten, Klerks, Paul L., and Hasenstein, Karl H. (2009) Involvement of actin and microtubules in regulation of bioluminescence and translocation of chloroplasts in the dinoflagellate Pyrocystis lunula. Botanica Marina, 52 (2). pp. 170-177.

Laurance, William F. (2009) Possum on the rostrum. Natural History. p. 48.

Pirozzi, Igor, Booth, Mark A, and Pankhurst, Patricia M. (2009) The effect of stocking density and repeated handling on the growth of juvenile mulloway, Argyrosomus japonicus (Temminck & Schlegel 1843). Aquaculture International, 17 (2). pp. 199-205.

Pirozzi, Igor, and Booth, Mark A. (2009) The routine metabolic rate of mulloway (Argyrosomus japonicus: Sciaenidae) and yellowtail kingfish (Seriola lalandi: Carangidae) acclimated to six different temperatures. Comparative Biochemistry and Physiology: Part A, 152 (4). pp. 586-592.

Cornelius, Jonathan P. (2009) The utility of the predictive decapitation test as a tool for early genetic selection for Hypsipyla tolerance in big-leaf mahogany (Swietenia macrophylla King). Forest Ecology and Management, 257 (8). pp. 1815-1821.

Mamangkey, N. Gustav F., Acosta-Salmon, Hector, and Southgate, Paul C. (2009) Use of anaesthetics with the silver-lip pearl oyster, Pinctada maxima (Jameson). Aquaculture, 288 (3-4). pp. 280-284.

Franks, P.J., and Beerling, D.J. (2009) CO2-forced evolution of plant gas exchange capacity and water-use efficiency over the Phanerozoic. Geobiology, 7 (2). pp. 227-236.

Kingsford, M.J. (2009) Contrasting patterns of reef utilization and recruitment of coral trout (Plectropomus leopardus) and snapper (Lutjanus carponotatus) at One Tree Island, southern Great Barrier Reef. Coral Reefs, 28 (1). pp. 251-264.

Cole, A.J., Pratchett, M.S., and Jones, G.P. (2009) Coral-feeding wrasse scars massive Porites colonies. Coral Reefs, 28 (1). p. 207.

Hoogenboom, Mia O., and Connolly, Sean R. (2009) Defining fundamental niche dimensions of corals: synergistic effects of colony size, light, and flow. Ecology, 90 (3). pp. 767-780.

Bonaldo, Roberta Martini, and Bellwood, David R. (2009) Dynamics of parrotfish grazing scars. Marine Biology, 156 (4). pp. 771-777.

Howells, E.J., van Oppen, M.J.H., and Willis, B.L. (2009) High genetic differentiation and cross-shelf patterns of genetic diversity among Great Barrier Reef populations of Symbiodinium. Coral Reefs, 28 (1). pp. 215-225.

Holmes, Thomas H., and McCormick, Mark I. (2009) Influence of prey body characteristics and performance on predator selection. Oecologia, 159 (2). pp. 401-413.

Bonin, M.C., Srinivasan, M., Almany, G.R., and Jones, G.P. (2009) Interactive effects of interspecifc competition and microhabitat on early post-settlement survival in a coral reef fish. Coral Reefs, 28 (1). pp. 265-274.

Fauvelot, C., Smith-Keune, C., Jerry, D.R., Buston, P.M., and Planes, S. (2009) Isolation and characterization of 16 microsatellite loci in the humbug damselfish, Dascyllus aruanus (family Pomacentridae). Molecular Ecology Resources, 9 (2). pp. 651-653.

Cvitanovic, C., and Bellwood, D.R. (2009) Local variation in herbivore feeding activity on an inshore reef of the Great Barrier Reef. Coral Reefs, 28 (1). pp. 127-133.

Nkouawa, Agathe, Okamoto, Munehiro, Mabou, Alida Kouojip, Edinga, Eulodie, Yamasaki, Hiroshi, Sako, Yasuhito, Nakao, Minoru, Nakaya, Kazuhiro, Blair, David, Agatsuma, Takeshi, Enyong, Peter, Shibahara, Toshiyuki, Moyou-Somo, Roger, and Ito, Akira (2009) Paragonimiasis in Cameroon: molecular identification, serodiagnosis and clinical manifestations. Transactions of the Royal Society of Tropical Medicine and Hygiene, 103 (3). pp. 255-261.

Isaac, Joanne L., VanDerWal, Jeremy, Johnson, Christopher N., and Williams, Stephen (2009) Resistance and resilience: quantifying relative extinction risk in a diverse assemblage of Australian tropical rainforest vertebrates. Diversity and Distributions, 15 (2). pp. 280-288.

Calvo, Guillen, Fonte, Maria, Heinemann, Jack, Ishii-Eiteman, Marcia, Jiggins, Janice, Leakey, Roger, and flencovich, Cristina (2009) Towards sustainable agriculture. UNESCO-SCOPE-UNEP Policy Briefs, 8. pp. 1-6.

Williamson, David, Jones, Geoffrey, Thorrold, Simon R, and Frisch, Ashley J. (2009) Transgenerational marking of marine fish larvae: stable-isotope retention, physiological effects and health issues. Journal of Fish Biology, 74 (4). pp. 891-905.

DeGabriel, Jane L., Moore, Ben D., Foley, William J., and Johnson, Christopher N. (2009) The effects of plant defensive chemistry on nutrient availability predict reproductive success in a mammal. Ecology, 90 (3). pp. 711-719.

Devney, Carol A., Kondrad, Shannon L., Stebbins, Katherine R., Brittingham, Kevin D., Hoffman, David J., and Heinz, Gary H. (2009) A saltwater flotation technique to identify unincubated eggs. Journal of Fields Ornithology, 80 (1). pp. 88-93.

VanDerWal, Jeremy, Shoo, Luke P., Graham, Catherine, and Williams, Stephen E. (2009) Selecting pseudo-absence data for presence-only distribution modeling: How far should you stray from what you know? Ecological Modelling, 220 (4). pp. 589-594.

Sussman, Meir, Mieog, Jos C., Doyle, Jason R., Victor, Steven, Willis, Bette L., and Bourne, David G. (2009) Vibrio Zinc-Metalloprotease causes photoinactivation of coral endosymbionts and coral tissue lesions. PLoS ONE, 4 (2). p. 4511.

Haapkyla, Jessica, Seymour, Adrian S., Barneah, Orit, Brickner, Itzchak, Hennige, Sebastian, Suggett, David, and Smith, David (2009) Association of Waminoa sp. (Acoela) with corals in the Wakatobi Marine Park, South-East Sulawesi, Indonesia. Marine Biology, 156. pp. 1021-1027.

Wismer, Sharon, Hoey, Andrew, and Bellwood, David R. (2009) Cross-shelf benthic community structure on the Great Barrier Reef: relationships between macroalgal cover and herbivore biomass. Marine Ecology Progress Series, 376. pp. 45-54.

Munday, Philip L., Dixson, Danielle L., Donelson, Jennifer M., Jones, Geoffrey P., Pratchett, Morgan S., Devitsina, Galina V., and Døving, Kjell B. (2009) Ocean acidification impairs olfactory discrimination and homing ability of a marine fish. Proceedings of the National Academy of Sciences of the United States of America, 106 (6). pp. 1848-1852.

Haynes, Gwilym D., Gongora, Jaime, Nicholas, Frank W., and Zenger, Kyall R. (2009) Rapid identification of maternal lineages in common carp (Cyprinus carpio L.) using real-time PCR and high resolution melt-curve analysis. Aquaculture, 287 (1-2). pp. 59-66.

Camus, Thomas, and Zeng, Chaoshu (2009) The effects of stocking density on egg production and hatching success, cannibalism rate, sex ratio and population growth of the tropical calanoid copepod Acartia sinjiensis. Aquaculture, 287 (1). pp. 145-151.

Johnson, Christopher N., and Isaac, Joanne L. (2009) Body mass and extinction risk in Australian marsupials: the 'Critical Weight Range' revisited. Austral Ecology, 34 (1). pp. 35-40.

Harrington, Mark G., Biffen, Ed, and Gadek, Paul A. (2009) Comparative study of the evolution of nuclear ribosomal spacers incorporating secondary structure analyzes within Dodonaeoideae, Hippocastanoideae and Xanthoceroideae (Sapindaceae). Molecular Phylogenetics and Evolution, 50 (2). pp. 364-375.

Ward, Rebekah J., Clements, Kendall D., Choat, John Howard, and Angert, Esther R. (2009) Cytology of terminally differentiated Epulopiscium mother cells. DNA and Cell Biology, 28 (2). pp. 57-64.

Pye, Matthew G., Henwood, Murray J., and Gadek, Paul A. (2009) Differential levels of genetic diversity and divergence among populations of an ancient Australian rainforest conifer, Araucaria cunninghamii. Plant Systematics and Evolution, 277 (3-4). pp. 173-185.

Valentine, Leonie E., and Schwarzkopf, Lin (2009) Effects of weed-management burning on reptile assemblages in Australian tropical savannas. Conservation Biology, 23 (1). pp. 103-113.

Barneche, Diego R., Floeter, S.R., Ceccarelli, D.M., Frensel, D.M.B., Dinslaken, D.F., Mario, H.F.S., and Ferreira, C.E.L. (2009) Feeding macroecology of territorial damselfishes (Perciformes: Pomacentridae). Marine Biology, 156 (3). pp. 289-299.

VanDerWal, Jeremy, Shoo, Luke P., and Williams, Stephen E. (2009) New approaches to understanding late Quaternary climate fluctuations and refugial dynamics in Australian wet tropical rain forests. Journal of Biogeography, 36 (2). pp. 291-301.

Clements, Kendall D., Raubenheimer, David, and Choat, J. Howard (2009) Nutritional ecology of marine herbivorous fishes: ten years on. Functional Ecology, 23 (1). pp. 79-92.

Kingsford, Michael J., Hughes, Julian M., and Patterson, Heather M. (2009) Otolith chemistry of the non-dispersing reef fish Acanthochromis polyacanthus: cross-shelf patterns from the central Great Barrier Reef. Marine Ecology Progress Series, 377. pp. 279-288.

Palmer, Caroline V., Roth, Melissa S., and Gates, Ruth D. (2009) Red fluorescent protein responsible for pigmentation in Trematode-infected Porites compressa tissues. Biological Bulletin, 216 (1). pp. 68-74.

Lemberget, Tove, and McCormick, Mark I. (2009) Replenishment success linked to fluctuating asymmetry in larval fish. Oecologia, 159 (1). pp. 83-93.

Morita, Masaya, Iguchi, Akira, and Takemura, Akihiro (2009) Roles of calmodulin and calcium/calmodulin-dependent protein kinase in flagellar motility regulation in the coral Acropora digitifera. Marine Biotechnology, 11 (1). pp. 118-123.

Newey, Philip S., Robson, Simon K.A., and Crozier, Ross H. (2009) Temporal variation in recognition cues: implications for the social life of weaver ants Oecophylla smaragdina. Animal Behaviour, 77 (2). pp. 481-488.

Hernaman, V., Probert, P.K., and Robbins, W.D. (2009) Trophic ecology of coral reef gobies: interspecific, ontogenetic, and seasonal comparison of diet and feeding intensity. Marine Biology, 156 (3). pp. 317-330.

Smith, Greg G., Hall, Michael W., and Salmon, Matthew (2009) Use of microspheres, fresh and microbound diets to ascertain dietary path, component size, and digestive gland functioning in phyllosoma of the spiny lobster Panulirus ornatus. New Zealand Journal of Marine and Freshwater Research, 43 (1). pp. 205-215.

Moussalli, Adnan, Moritz, Craig, Williams, Stephen E., and Carnaval, Ana C. (2009) Variable responses of skinks to a common history of rainforest fluctuation: concordance between phylogeography and palaeo-distribution models. Molecular Ecology, 18 (3). pp. 483-499.

Brodie, Jon, Pearson, Richard, Lewis, Stephen, Bainbridge, Zoe, Waterhouse, Jane, and Prange, Joelle (2009) Water quality research: baseline synthesis and year 1 summary. Report. Reef and Rainforest Research Centre on behalf of the Australian Government's Marine and Tropical Sciences Research Facility, Cairns, Australia.

Holme, May-Helen, Zeng, Chaoshu, and Southgate, Paul C. (2009) A review of recent progress toward development of a formulated microbound diet for mud crab, Scylla serrata, larvae and their nutritional requirements. Aquaculture, 286 (3). pp. 164-175.

Lind, Curtis E., Evans, Brad S., Knauer, Jens, Taylor, Joseph J.U., and Jerry, Dean R. (2009) Decreased genetic diversity and a reduced effective population size in cultured silver-lipped pearl oysters (Pinctada maxima). Aquaculture, 286 (1-2). pp. 12-19.

Laurance, William (2009) Move over, polar bear. New Scientist, 201 (2690). p. 14.

Scardino, A.J., Hudleston, D., Peng, Z., Paul, N.A., and de Nys, R. (2009) Biomimetic characterisation of key surface parameters for the development of fouling resistant materials. Biofouling, 25 (1). pp. 83-93.

Gershwin, Lisa-ann, and Dabinett, Karen (2009) Comparison of eight types of protective clothing against Irukandji jellyfish stings. Journal of Coastal Research, 25 (1). pp. 117-130.

Alford, Ross A., Brown, Gregory P., Schwarzkopf, Lin, Phillips, Benjamin L., and Shine, Richard (2009) Comparisons through time and space suggest rapid evolution of dispersal behaviour in an invasive species. Wildlife Research, 36 (1). pp. 23-28.

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Crossland, Michael R., Alford, Ross A., and Shine, Richard (2009) Impact of the invasive cane toad (Bufo marinus) on an Australian frog (Opisthodon ornatus) depends on minor variation in reproductive timing. Oecologia, 158 (4). pp. 652-632.

Krajewski, J.P., Bonaldo, R.M., Sazima, C., and Sazima, I. (2009) Octopus mimicking its follower reef fish. Journal of Natural History, 43 (3). pp. 185-190.

Gordon, M.R., and Seymour, J.E. (2009) Quantifying movement of the tropical Australian cubozoan Chironex fleckeri using acoustic telemetry. Hydrobiologia, 616 (1). pp. 87-97.

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Harris, Reid N., Lauer, Antje, Simon, Mary Alice, Banning, Jenifer L., and Alford, Ross A. (2009) Addition of antifungal skin bacteria to salamanders ameliorates the effects of chytridiomycosis. Diseases of Aquatic Organisms, 83 (1). pp. 11-16.

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Lawn, Robert (2009) Agriculture at the crossroad: challenges for crop improvement. In: International Conference on Agriculture at the Crossroad, p. 1. From: International Conference on Agriculture at the Crossroad, 25-26 November 2009, Bandung, Indonesia.

Ceccarelli, Fadia Sara (2009) Ant-mimicking spider, Myrmarachne species (Araneae : Salticidae), distinguishes its model, the green ant, Oecophylla smaragdina, from a sympatric Batesian O. smaragdina mimic, Riptortus serripes (Hemiptera : Alydidae). Australian Journal of Zoology, 57 (5). pp. 305-309.

Littman, Raechel A., Willis, Bette L., and Bourne, David G. (2009) Bacterial communities of juvenile corals infected with different Symbiodinium (dinoflagellate) clades. Marine Ecology Progress Series, 389. pp. 45-59.

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Goodman, Brett A. (2009) Book review of "Lizard Ecology: the evolutionary consequences of foraging mode" edited by Stephen M. Reilly, Lance B. McBrayer, and Donald B. Miles, Cambridge University Press, Cambridge, New York. Herpetological Review, 40 (3). pp. 371-374.

Schlüns, E.A., Wegener, B.J., Schlüns, H., Azuma, N., Robson, S.K.A., and Crozier, R.H. (2009) Breeding system, colony and population structure in the weaver ant Oecophylla smaragdina. Molecular Ecology, 18. pp. 156-167.

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Laurance, William F. (2009) Changing realities for tropical forest managers. ITTO Tropical Forest Update, 18 (4). pp. 6-8.

Guenther, Jana, Wright, Anthony D., Burns, Kathryn, and de Nys, Rocky (2009) Chemical antifouling defences of sea stars: effects of the natural products hexadecanoic acid, cholesterol, lathosterol and sitosterol. Marine Ecology Progress Series, 385. pp. 137-149.

Allan, K., Boyero, L., and Pearson, R.G. (2009) Chemical communication in competitive interactions among tropical stream detritivores. Tropical Zoology, 22 (2). pp. 195-204.

Lloyd, Ray, Alford, Ross A., and Schwarzkopf, Lin (2009) Chemical discrimination among predators by lizards: responses of three skink species to the odours of high and low-threat varanid predators. Austral Ecology, 34. pp. 50-54.

Puill-Stephan, Eneour, Willis, Bette L., van Herwerden, Lynne, and van Oppen, Madeleine JH (2009) Chimerism in wild adult populations of the broadcast spawning coral Acropora millepora on the Great Barrier Reef. PLoS ONE, 4 (1). p. 7751.

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Sheaves, Marcus (2009) Consequences of ecological connectivity: the coastal ecosystem mosaic. Marine Ecology Progress Series, 391. pp. 107-115.

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Welch, D.J., Buckworth, R.C., Ovenden, J.R., Newman, S.J., Broderick, D., Lester, R.J.G., Ballagh, A.C., Stapley, J., Charters, R.A., and Gribble, N.A. (2009) Determination of management units for grey mackerel fisheries in northern Australia. Report. James Cook University, Townsville, Queensland, Australia.

Rigg, Damian P., Peverell, Stirling C., Hearndon, Mark, and Seymour, Jamie E. (2009) Do elasmobranch reactions to magnetic fields in water show promise for bycatch mitigation? Marine and Freshwater Research, 60 (9). pp. 942-948.

Coker, D.J., Pratchett, M.S., and Munday, P.L. (2009) Does body colouration influence predation risk of coral dwelling reef fish in bleached landscapes? In: Proceedings of the 11th Coral Reef Symposium, pp. 1281-1285. From: 11th International Coral Reef Symposium, 7-11 July 2008, Fort Lauderdale, Florida, USA.

Leakey, R.R.B, Nevenimo, T., Moxon, J., Pauku, R., Tate, H, Page, T., and Cornelius, J. (2009) Domestication and improvement of tropical crops for multi-functional farming systems. In: Proceedings of 14th Australasian Plant Breeding Conference and 11th SABRAO Congress, pp. 1-23. From: 14th APBC/11th SABRAO Congress, 10-13 August 2009, Cairns, QLD, Australia.

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Collier, Catherine, and Waycott, Michelle (2009) Drivers of Change to Seagrass Distributions and Communities on the Great Barrier Reef: literature review and gaps analysis. Report. Reef and Rainforest Research Centre, Cairns, QLD, Australia.

Sangha, Kamalijit Kaur (2009) Ecological Effects of Tree Clearing: the ecological effects of tree clearing on pasture systems of central Queensland, Australia. VDM Verlag, Saarbrücken, Germany.

Laurance, William F., and Vasconcelos, Heraldo L. (2009) Ecological consequences of forest fragmentation in the Amazon. Oecologia Brasiliensis, 13 (3). pp. 434-451.

Peplow, L.M., Kingsford, M.J., Seymour, J.E., and Van Oppen, M.J.H. (2009) Eight microsatellite loci for the Irukandji syndrome-causing carybdeid jellyfish, Carukia barnesi (Cubozoa, Cnidaria). Molecular Ecology Resources, 9. pp. 670-672.

Nilsson, Göran E., Crawley, Natalie, Lunde, Ida G., and Munday, Philip L. (2009) Elevated temperature reduces the respiratory scope of coral reef fishes. Global Change Biology, 15 (6). pp. 1405-1412.

Fox, Rebecca J., Sunderland, Tony L., Hoey, Andrew, and Bellwood, David R. (2009) Estimating ecosystem function: contrasting roles of closely related herbivorous rabbitfishes (Siganidae) on coral reefs. Marine Ecology Progress Series, 385. pp. 261-269.

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Adams, Lisa M., Cumbo, Vivian, and Takabayashi, Misaki (2009) Exposure to sediment enhances primary acquisition of Symbiodinium by asymbiotic coral larvae. Marine Ecology Progress Series, 377. pp. 179-156.

Rowley, Jodi J.I., and Alford, Ross A. (2009) Factors affecting interspecific variation in susceptibility to disease in amphibians. In: Heatwole, Harold, and Wilkinson, John W., (eds.) Amphibian Biology:. Volume 8: Amphibian Decline: diseases, parasites, maladies and pollution, 8 . Surrey Beatty & Sons, Chipping Norton, NSW, Australia, pp. 3053-3066.

Laurance, William F. (2009) Faculty response: After "eco" comes "service". Frontiers in Ecology and the Environment, 7. p. 278.

Baumgartner, Finn A., Motti, Cherie, de Nys, Rocky, and Paul, Nicholas A. (2009) Feeding preferences and host associations of specialist marine herbivores align with quantitative variation in seaweed secondary metabolites. Marine Ecology Progress Series, 396. pp. 1-12.

Walker, Stefan P.W., and McCormick, Mark I. (2009) Fish ears are sensitive to sex change. Biology Letters, 5. pp. 73-76.

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Jamnadass, Ramni, Dawson, Ian, Leakey, Roger, Kindt, Roeland, Muriuki, Jonathan, Beniest, Jan, and Simons, Tony (2009) Forest genetic resources and farmers’ tree domestication. In: Proceedings of a Regional Workshop: learning agrobiodiversity: options for universities in Sub-Saharan Africa, pp. 45-50. From: Regional Workshop: learning agrobiodiversity: options for universities in Sub-Saharan Africa, 21-23 January 2009, Nairobi, Kenya.

Meyer, Eli, Davies, Sarah, Wang, Shi, Willis, Bette L., Abrego, David, Juenger, Thomas E., and Matz, Mikhail V. (2009) Genetic variation in responses to a settlement cue and elevated temperature in the reef-building coral Acropora millepora. Marine Ecology Progress Series, 392. pp. 81-92.

Goodman, Brett A. (2009) Glaphyromorphus nigricaudus (NCN): prey piracy. Herpetological Review, 40 (1). pp. 85-86.

Pearson, Richard G., and Boyero, Luz (2009) Gradients in regional diversity of freshwater taxa. Journal of the North American Benthological Society, 28 (2). pp. 504-514.

Hooker, Nanette, and Jackes, Betsy (2009) Grasses of James Cook University, Townsville Campus Part A: a pictorial key to grass genera in North Queensland. James Cook University, Townsville, Queensland, Australia.

Hooker, Nanette (2009) Grasses of James Cook University, Townsville Campus Part B: generic descriptions and key to species. James Cook University, Townsville, Queensland, Australia.

Yek, Sze Huei, Williams, Stephen E., Burwell, Chris J., Robson, Simon K.A., and Crozier, Ross H. (2009) Ground dwelling ants as surrogates for establishing conservation priorities in the Australian wet tropics. Journal of Insect Science, 9 (12). pp. 1-12.

Munday, P. L., Ryen, C.A., McCormick, M. I., and Walker, S.P.W. (2009) Growth acceleration, behaviour and otolith check marks associated with sex change in the wrasse Halichoeres miniatus. Coral Reefs, 28 (3). pp. 623-634.

Greer, Amy L., Schock, Danna M., Brunner, Jesse L., Johnson, Rebecca A., Picco, Angela M., Cashins, Scott D., Alford, Ross A., Skerratt, Lee F., and Collins, James P. (2009) Guidelines for the safe use of disposable gloves with amphibian larvae in light of pathogens and possible toxic effects. Herpetological Review, 40 (2). pp. 145-147.

Abrego, David, van Oppen, Madeleine J.H., and Willis, Bette L. (2009) Highly infectious symbiont dominates initial uptake in coral juveniles. Molecular Ecology, 18. pp. 3518-3531.

Li, Jin, Hilbert, David W., Parker, Trevor, and Williams, Stephen (2009) How do species respond to climate change along an elevation gradient? A case study of the grey-headed robin (Heteromyias albispecularis). Global Change Biology, 15. pp. 255-267.

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Anderson, L.O., Malhi, Y., Ladle, R.J., Aragao, L.E.O.C., Shimabukuro, Y., Phillips, O.L., Baker, T., Costa, A.C.L., Espejo, J.S., Higuchi, N., Laurance, W.F., López González, G., Monteagudo, A., Núñez-Vargas, P., Peacock, J., Quesada, C.A., and Almeida, S. (2009) Influence of landscape heterogeneity on spatial patterns of wood productivity, wood specific density and above ground biomass in Amazonia. Biogeosciences, 6 (9). pp. 1883-1902.

Page, Cathie A., Baker, David M., Harvell, C Drew, Golbuu, Yimnang, Raymundo, Laurie, Neale, Stephen J., Rosell, Kathryn B., Rypien, Krystal L., Andras, Jason P., and Willis, Bette L. (2009) Influence of marine reserves on coral disease prevalence. Diseases of Aquatic Organisms, 87 (1-2). pp. 135-150.

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Shoo, Luke P., Anderson, Alex, and Williams, Stephen (2009) On the isolated population of Lewin’s Honeyeater (Meliphaga lewinii amphochlora) from the McIlwraith Range uplands, Cape York Peninsula, Australia: estimates of population size and distribution. Emu: austral ornithology, 109 (4). pp. 288-293.

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Rapley, Luke, Johnson, P.H., Williams, C. R., Silcock, R. M., Larkman, M., Long, S. A., Russel, R. C., and Ritchie, Scott (2009) A lethal ovitrap-based mass trapping scheme for dengue control in Australia: II. Impact on populations of the mosquito Aedes aegypti. Medical and Veterinary Entomology, 23 (4). pp. 303-316.

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Winsor, Leigh (2009) A new subfamily, new genus and new species of terrestrial flatworm (Platyhelminthes: Tricladida: Geoplanidae) from Stewart Island, New Zealand. Tuhinga: records of the museum of New Zealand Te Papa Tongarewa, 20. pp. 23-32.

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Krautwald, Martina, Maxwell, Philippa, Stuchbury, Grant, Holtum, Joe, Burnell, James, and Munch, Gerald (2009) The thiamine analogue and advanced glycation endproducts crosslink breaker ALT-711 does not interfere with transketolase activity. Open Longevity Science, 3. pp. 11-15.

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Dixson, Danielle L. , Jones, Geoffrey P., Munday, Philip L., Planes, Serge, Pratchett, Morgan S., Srinivasan, Maya, Syms, Craig, and Thorrold, Simon R. (2008) Coral reef fish smell leaves to find island homes. Proceedings of the Royal Society of London Series B, Biological Sciences, 275. pp. 2831-2839.

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Parsons, Jennifer G., Blair, David, Luly, Jon, and Robson, Simon K.A. (2008) Flying-fox (Megachiroptera: Pteropodidae) flight altitudes determined via an unusual sampling method: aircraft strikes in Australia. Acta Chiropterologica, 10 (2). pp. 377-379.

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Yin, Mingbo, Hu, Wei, Mo, Xiaojin, Wang, Shengyue, Brindley, Paul J., McManus, Donald P., Davis, George M., Feng, Zheng, and Blair, David (2008) Multiple near-identical genotypes of Schistosoma japonicum can occur in snails and have implications for population-genetic analyses. International Journal for Parasitology, 38 (14). pp. 1681-1691.

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Isaac, Joanne L. (2008) Out of the mist. BBC Wildlife, 1. p. 45.

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Lawn, R.J., and Likoswe, A.A. (2008) Genotypic differences in leaf area maintenance contribute to differences in recovery from water stress in soybean. Australian Journal of Agricultural Research, 59 (12). pp. 1075-1085