Hook, Sharon E., Smith, Rachael A., Waltham, Nathan, and Warne, Michael St.J. (2024) Pesticides in the Great Barrier Reef catchment area: Plausible risks to fish populations. Integrated Environmental Assessment and Management. (In Press)

Morris, Rebecca L., Campbell-Hooper, Erin, Waters, Elissa, Bishop, Melanie J., Lovelock, Catherine E., Lowe, Ryan J., Strain, Elizabeth M.A., Boon, Paul, Boxshall, Anthony, Browne, Nicola K., Carley, James T., Fest, Benedikt J., Fraser, Matthew W., Ghisalberti, Marco, Gillanders, Bronwyn M., Kendrick, Gary A., Konlechner, Teresa M., Mayer-Pinto, Mariana, Pomeroy, Andrew W.M., Rogers, Abbie A., Simpson, Viveka, Van Rooijen, Arnold A., Waltham, Nathan J., and Swearer, Stephen E. (2024) Current extent and future opportunities for living shorelines in Australia. Science of the Total Environment, 917. 17063.

Twomey, Alice J., Nunez, Karinna, Carr, Joel A., Crooks, Steve, Freiss, Daniel A., Glamore, William, Orr, Michelle, Reef, Ruth, Rogers, Kerrylee, Waltham, Nathan J., and Lovelock, Catherine E. (2024) Planning hydrological restoration of coastal wetlands: Key model considerations and solutions. Science of the Total Environment, 915. 169881.

Vulliet, Cecile, Koci, Jack, Jarihani, Ben, Sheaves, Marcus, and Waltham, Nathan (2023) Assessing Tidal Hydrodynamics in a Tropical Seascape Using Structure-from‐Motion Photogrammetry and 2D Flow Modelling. Estuaries and Coasts. (In Press)

Cadier, Charles, Waltham, Nathan J., Canning, Adam, Fry, Scott, and Adame, Maria (2023) Tidal restoration to reduce greenhouse gas emissions from freshwater impounded coastal wetlands. Restoration Ecology. (In Press)

Sheaves, M., Mattone, C., Barnett, A., Abrantes, K., Bradley, M., Sheaves, A., Sheaves, J., and Waltham, N.J. (2023) Whale sharks as oceanic nurseries for Golden Trevally. Pacific Conservation Biology, 23004. (In Press)

Walker, S.E., Sheaves, M., and Waltham, N.J. (2023) Barriers to Using UAVs in Conservation and Environmental Management: A Systematic Review. Environmental Management, 71. pp. 1052-1064.

Waltham, Nathan, Lovelock, Catherine, and Buelow, Christina (2023) Blue carbon stocks and cycling in tropical tidal marshes facing grazing pressure. Marine Ecology Progress Series, 717. pp. 1-16.

Canning, Adam D., Smart, James C.R., Dyke, Joshua, Curwen, Graeme, Hasan, Syezlin, and Waltham, Nathan J. (2023) Constructed Wetlands Suitability for Sugarcane Profitability, Freshwater Biodiversity and Ecosystem Services. Environmental Management, 71. pp. 304-320.

Waltham, Nathan J., Snape, Natale, Villacorta-Rath, Cecilia, and Burrows, Damien (2023) New Australian frontier in freshwater fish invasion via Torres Strait Islands. Biodiversity and Conservation, 32. pp. 4551-4571.

Iles, J.A., Cartwright, P., Johns, J., and Waltham, N.J. (2023) Quality control procedure for marine water quality logger data. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Duarte de Paula Costa, Micheli, Adame, Maria Fernanda, Bryant, Catherine V., Hill, Jack, Kellaway, Jeffrey J., Lovelock, Catherine E., Ola, Anne, Rasheed, Michael A., Salinas, Christian, Serrano, Oscar, Waltham, Nathan, York, Paul H., Young, Mary, and Macreadie, Peter (2023) Quantifying blue carbon stocks and the role of protected areas to conserve coastal wetlands. Science of the Total Environment, 874. 162518.

Jahanbakht, Mohammad, Rahimi Azghadi, Mostafa, and Waltham, Nathan J. (2023) Semi-supervised and weakly-supervised deep neural networks and dataset for fish detection in turbid underwater videos. Ecological Informatics, 78. 102303.

Cartwright, Paula, Waltham, Nathan, and Iles, Jordan (2023) Southern Mackay Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Bradley, Michael, Sheaves, Marcus, and Waltham, Nathan J. (2023) Urban-industrial seascapes can be abundant and dynamic fish habitat. Frontiers in Marine Science, 9. 1034039.

Cartwright, Paula, Waltham, Nathan, and Iles, Jordan (2023) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Annual report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Iles, J.A., Cartwright, P.J., and Waltham, N.J. (2023) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Annual report 2022-2023. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Iles, J.A., Cartwright, P.J., and Waltham, N. (2022) TSRA Groundwater Monitoring: Final Report 2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Castle, Alicia, and Waltham, Nathan (2022) Clearance rates achieved by an intertidal oyster, Isognomon ephippium, under different tidal emersion and temperature conditions. Estuarine, Coastal and Shelf Science, 276. 108018.

Walker, Sophie, Waltham, Nathan, Buelow, Christina, and Iles, Jordan (2022) Coastal habitat restoration, invasive species and remote monitoring solutions. In: Humphreys, John, and Little, Sally, (eds.) Challenges in Estuarine and Coastal Science: Estuarine and Coastal Sciences Association 50th anniversary volume. Pelagic Publishing, Exeter, UK, pp. 160-176.

Jahanbakht, Mohammad, Xiang, Wei, Waltham, Nathan J., and Rahimiazghadi, Mostafa (2022) Distributed Deep Learning in the Cloud and Energy-efficient Real-time Image Processing at the Edge for Fish Segmentation in Underwater Videos Segmentation in Underwater Videos. IEEE Access, 10. pp. 117796-117807.

Waltham, Nathan J., and Connolly, Rod M. (2022) Food webs supporting fisheries production in estuaries with expanding coastal urbanisation. Food Webs, 33. e00259.

Murray, Nicholas J., Worthington, Thomas A., Bunting, Pete, Duce, Stephanie, Hagger, Valerie, Lovelock, Catherine E., Lucas, Richard, Saunders, Megan I., Sheaves, Marcus, Spalding, Mark, Waltham, Nathan J., and Lyons, Mitchell B. (2022) High-resolution mapping of losses and gains of Earth's tidal wetlands. Science, 376. pp. 744-749.

Claassens, L., de Villiers, N.M., and Waltham, N.J. (2022) How developed is the South African coast? Baseline extent of South Africa’s coastal and estuarine infrastructure. Ocean and Coastal Management, 222. 106112.

Wallace, Jim, Bueno, Carlos, and Waltham, Nathan J. (2022) Modelling the removal of nitrogen and sediment by a constructed wetland system in north Queensland, Australia. Ecological Engineering, 184. 106767.

Hagger, Valerie, Waltham, Nathan J., and Lovelock, Catherine E. (2022) Opportunities for coastal wetland restoration for blue carbon with co-benefits for biodiversity, coastal fisheries, and water quality. Ecosystem Services, 55. 101423.

Cartwright, Paula, Iles, Jordan, and Waltham, Nathan (2022) Port of Abbot Point Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Cartwright, P., Iles, J.A., and Waltham, N.J. (2022) Port of Mackay and Hay Point Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Waltham, N.J., Iles, J.A., and Cartwright, P. (2022) Port of Weipa Ambient Marine Water Quality Monitoring Program: Annual Report 2021-2022. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Waltham, Nathan J., Bradley, Michael, Wilson, Saara, Kane, Kevin, Langham, Odette, and Sheaves, Marcus (2022) Remotely operated vehicle reveals fish orientate to the substrate underneath marina floating pontoons. Estuarine, Coastal and Shelf Science, 280. 108184.

Waltham, Nathan J., Schaffer, Jason, Walker, Sophie, Perry, Justin, and Nordberg, Eric (2022) Simple fence modification increases land movement prospects for freshwater turtles on floodplains. Wildlife Biology, 2022 (3). e01012.

Cartwright, Paula, Iles, Jordan, Mattone, Carlo, O'Callaghan, Mark, and Waltham, Nathan (2022) Turbidity (NTU) to Suspended Sediment Concentration (SSC) Conversion Protocol. Report. TropWATER, Townsville, QLD, Australia.

Dubuc, Alexia, Collins, Geoffrey, Coleman, Laura, Waltham, Nathan J., Rummer, Jodie L., and Sheaves, Marcus (2021) Association between physiological performance and short temporal changes in habitat utilisation modulated by environmental factors. Marine Environmental Research, 170. 105448.

Colombano, Denise D., Litvin, Steven Y., Ziegler, Shelby L., Alford, Scott B., Baker, Ronald, Barbeau, Myriam A., Cebrián, Just, Connolly, Rod M., Currin, Carolyn A., Deegan, Linda A., Lesser, Justin S., Martin, Charles W., McDonald, Ashley E., McLuckie, Catherine, Morrison, Blair H., Pahl, James W., Risse, L. Mark, Smith, Joseph A.M., Staver, Lorie W., Turner, R. Eugene, and Waltham, Nathan J. (2021) Climate change implications for tidal marshes and food web linkages to estuarine and coastal nekton. Estuaries and Coasts, 44. pp. 1637-1648.

Duarte de Paula Costa, Micheli, Lovelock, Catherine E., Waltham, Nathan J., Young, Mary, Adame, Maria F., Bryant, Catherine V., Butler, Don, Green, David, Rasheed, Michael A., Salinas, Cristian, Serrano, Oscar, York, Paul H., Whitt, Ashley A., and Macreadie, Peter I. (2021) Current and future carbon stocks in coastal wetlands within the Great Barrier Reef catchments. Global Change Biology, 27 (14). pp. 3257-3271.

Adame, Maria, Waltham, Nathan, Iram, Naima, Farahani, Bahareh Shahrabi, Salinas, Cristian, Buford, Michelle, and Ronan, Mike (2021) Denitrification within the sediments and epiphyton of tropical macrophyte stands. Inland Waters, 11. 3. pp. 257-266.

Sheaves, Marcus, Mattone, Carlo, Connolly, Rod M., Hernandez, Stephanie, Nagelkerken, Ivan, Murray, Nicholas, Ronan, Michael, Waltham, Nathan John, and Bradley, Michael (2021) Ecological constraint mapping: understanding uutcome-limiting bottlenecks for improved environmental decision-making in marine and coastal environments. Frontiers in Marine Science, 8. 717448.

Canning, Adam D., and Waltham, Nathan J. (2021) Ecological impact assessment of climate change and habitat loss on wetland vertebrate assemblages of the Great Barrier Reef catchment and the influence of survey bias. Ecology and Evolution, 11 (10). pp. 5244-5254.

Chilton, Daniel, Hamilton, David P., Nagelkerken, Ivan, Cook, Perran, Hipsey, Matthew R., Reid, Robert, Sheaves, Marcus, Waltham, Nathan J., and Brookes, Justin (2021) Environmental flow requirements of estuaries: providing resilience to current and future climate and direct anthropogenic changes. Frontiers in Environmental Science, 9. 764218.

Canning, Adam D., Jarvis, Diane, Costanza, Robert, Hasan, Syezlin, Smart, James C.R., Finisdore, John, Lovelock, Catherine E., Greenhalgh, Suzie, Marr, Helen M., Beck, Michael W., Gillies, Christopher L., and Waltham, Nathan J. (2021) Financial incentives for large-scale wetland restoration: beyond markets to common asset trusts. One Earth, 4 (7). pp. 937-950.

Dunstan, Laura, Pulman, Lisa, Waltham, Nathan, and Sargent, Sue (2021) Finding the sweet spot: Can social marketing encourage cane farmers to change practices for water quality outcomes in the Great Barrier Reef Catchment? In: Hay, Rachel, Eagle, Lynne, and Bhati, Abhishek, (eds.) Broadening Cultural Horizons in Social Marketing: comparing case studies from Asia-Pacific. Springer, Singapore, pp. 29-46.

Ziegler, Shelby L., Baker, Ronald, Crosby, Sarah C., Colombano, Denise D., Barbeau, Myriam A., Cebrian, Just, Connolly, Rod M., Deegan, Linda A., Gilby, Ben L., Mallick, Debbrota, Martin, Charles W., Nelson, James A., Reinhardt, James F., Simenstad, Charles A., Waltham, Nathan J., Worthington, Thomas A., and Rozas, Lawrence P. (2021) Geographic variation in salt marsh structure and function for Nekton: a guide to finding commonality across multiple scales. Estuaries and Coasts, 44. pp. 1497-1507.

Waltham, Nathan J., Wegscheidl, Carla, Volders, Adrian, Smart, James C.R., Hasan, Syezlin, Ledee, Elodie, and Waterhouse, Jane (2021) Land use conversion to improve water quality in high DIN risk, low-lying sugarcane areas of the Great Barrier Reef catchments. Marine Pollution Bulletin, 167. 112373.

Duarte de Paula Costa, Micheli, Lovelock, Catherine E., Waltham, Nathan C., Moritsch, Monica, Butler, Don, Power, Trent, Thomas, Evan, and Macreadie, Peter I. (2021) Modelling blue carbon farming opportunities at different spatial scales. Journal of Environmental Management, 301. 113813.

Karim, Fazlul, Wallace, Jim, Abbott, Brett, Nicholas, Mike, and Waltham, Nathan J. (2021) Modelling the removal of an earth bund to maximise seawater ingress into a coastal wetland. Estuarine, Coastal and Shelf Science, 263. 107626.

Kimball, Matthew, Connolly, Rod M., Alford, Scott B., Colombano, Denise D., James, W. Ryan, Kenworthy, Matthew D., Norris, Gregory S., Ollerhead, Jeff, Ramsden, Sarah, Rehage, Jennifer S., Sparks, Eric L., Waltham, Nathan J., Worthington, Thomas A., and Taylor, Matthew D. (2021) Novel applications of technology for advancing tidal marsh ecology. Estuaries and Coasts, 44. pp. 1568-1578.

Wallace, Jim, and Waltham, Nathan J. (2021) On the potential for improving water quality entering the Great Barrier Reef lagoon using constructed wetlands. Marine Pollution Bulletin, 170. 112627.

Canning, Adam D., Death, Russell G., and Waltham, Nathan J. (2021) Pharmaceutical companies should pay for raiding nature's medicine cabinet. Lancet, 398 (10303). pp. 840-841.

Waltham, N., Iles, J.A., and Johns, J. (2021) Port of Abbot Point Ambient Marine Water Quality Monitoring Program: Annual Report 2020-2021: A Report for North Queensland Bulk Ports Corporation. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Waltham, N., Iles, J.A., and Johns, J. (2021) Port of Mackay and Hay Point Ambient Marine Water Quality Monitoring Program: Annual Report 2020-2021. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Waltham, N.J., Iles, J.A., and Johns, J. (2021) Port of Weipa Ambient Marine Water Quality Monitoring Program: Annual Report 2020-2021: A Report for North Queensland Bulk Ports Corporation. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Sheaves, M., Waltham, N.J., Benham, C., Bradley, M., Mattone, C., Diedrich, A., Sheaves, J., Sheaves, A., Hernandez, S., Dale, P., Banhalmi-Zakar, Z., and Newlands, M. (2021) Restoration of marine ecosystems: understanding possible futures for optimal outcomes. Science of the Total Environment, 796. 148845.

Waltham, N.J., and Iles, J.A. (2021) Southern Mackay Ambient Marine Water Quality Monitoring Program: Annual report 2020-2021. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Waltham, Nathan J., Alcott, Caitlin, Barbeau, Myriam A., Cebrian, Just, Connolly, Rod, Deegan, Linda A., Dodds, Kate, Goodridge Gaines, Lucy, Gilby, Ben, Henderson, Christopher J., McLuckie, Catherine M., Minello, Thomas, Norris, Gregory, Ollerhead, Jeff, Pahl, James, Reinhardt, James F., Rezek, Ryan J., Simenstad, Charles, Smith, Joseph A.M., Sparks, Eric, Staver, Lorie W., Ziegler, Shelby, and Weinstein, Michael (2021) Tidal Marsh Restoration Optimism in a Changing Climate and Urbanizing Seascape. Estuaries and Coasts, 44. pp. 1681-1690.

Iles, Jordan, and Waltham, Nathan (2021) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Quarterly update - January 2021 Report 21/02. Report. TropWATER, Townsville.

Waltham, Nathan, and Schaffer, Jason (2021) Will fencing floodplain and riverine wetlands from feral pig damage conserve fish community values? Ecology and Evolution, 11 (20). pp. 13780-13792.

Iles, Jordan, and Waltham, Nathan (2021) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Final report. Report. James Cook University, Townsville, QLD, Australia. (Unpublished)

Iles, Jordan, and Waltham, Nathan (2021) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Quarterly update - April 2021. Report. TropWATER, Townsville, QLD, Australia. (Unpublished)

Abbott, Brett N., Wallace, Jim, Nicholas, David M., Karim, Fazlul, and Waltham, Nathan J. (2020) Bund removal to re-establish tidal flow, remove aquatic weeds and restore coastal wetland services—North Queensland, Australia. PLoS ONE, 15 (1). e0217531.

Stewart-Sinclair, Phoebe J., Purandare, Jemma, Bayraktarov, Elisa, Waltham, Nathan, Reeves, Simon, Statton, John, Sinclair, Elizabeth A., Brown, Benjamin M., Shribman, Zoë I., and Lovelock, Catherine E. (2020) Blue restoration - building confidence and overcoming barriers. Frontiers in Marine Science, 7. 541700.

Baker, Ronald, Taylor, Matthew D., Able, Kenneth W., Beck, Michael W., Cebrian, Just, Colombano, Denise D., Connolly, Rod M., Currin, Carolyn, Deegan, Linda A., Feller, Ilka C., Gilby, Ben L., Kimball, Matthew E., Minello, Thomas J., Rozas, Lawrence P., Simenstad, Charles, Turner, R. Eugene, Waltham, Nathan J., Weinstein, Michael P., Ziegler, Shelby L., zu Ermgassen, Philine S.E., Alcott, Caitlin, Alford, Scott B., Barbeau, Myriam A., Crosby, Sarah C., Dodds, Kate, Frank, Alyssa, Goeke, Janelle, Goodridge Gaines, Lucy A., Hardcastle, Felicity E., Henderson, Christopher J., James, W. Ryan, Kenworthy, Matthew D., Lesser, Justin, Mallick, Debbrota, Martin, Charles W., McDonald, Ashley E., McLuckie, Catherine, Morrison, Blair H., Nelson, James A., Norris, Gregory S., Ollerhead, Jeff, Pahl, James W., Ramsden, Sarah, Rehage, Jennifer S., Reinhardt, James F., Rezek, Ryan J., Risse, L. Mark, Smith, Joseph A.M., Sparks, Eric L., and Staver, Lorie W. (2020) Fisheries rely on threatened salt marshes. Science, 370 (6517). pp. 670-671.

Gilby, Ben L., Weinstein, Michael P., Baker, Ronald, Cebrian, Just, Alford, Scott B., Chelsky, Ariella, Colombano, Denise, Connolly, Rod M., Currin, Carolyn A., Feller, Ilka C., Frank, Alyssa, Goeke, Janelle A., Goodridge Gaines, Lucy A., Hardcastle, Felicity E., Henderson, Christopher J., Martin, Charles W., McDonald, Ashley E., Morrison, Blair H., Olds, Andrew D., Rehage, Jennifer S., Waltham, Nathan J., and Ziegler, Shelby L. (2020) Human actions alter tidal marsh seascapes and the provision of ecosystem services. Estuaries and Coasts.

Waltham, Nathan J., Pyott, Merv, Buelow, Christina, and Wearne, Lynise (2020) Mechanical harvester removes invasive aquatic weeds to restore water quality and fish habitat values on the Burdekin floodplain. Ecological Management and Restoration, 21 (3). pp. 187-197.

Waltham, Nathan J., McCann, Jack, Power, Trent, Moore, Matt, and Buelow, Christina (2020) Patterns of fish use in urban estuaries: engineering maintenance schedules to protect broader seascape habitat. Estuarine, Coastal and Shelf Science, 238. 106729.

Waltham, Nathan J., Coleman, Laura, Buelow, Christina, Fry, Scott, and Burrows, Damien (2020) Restoring fish habitat values on a tropical agricultural floodplain: learning from two decades of aquatic invasive plant maintenance efforts. Ocean and Coastal Management, 198. 105355.

Buelow, Christina A., and Waltham, Nathan J. (2020) Restoring tropical coastal wetland water quality: ecosystem service provisioning by a native freshwater bivalve. Aquatic Sciences, 82. 77.

Baker, Ronald, and Waltham, Nathan (2020) Tethering mobile aquatic organisms to measure predation: a renewed call for caution. Journal of Experimental Marine Biology and Ecology, 523. 151270.

Waltham, Nathan J., and Sheaves, Marcus (2020) Thermal exposure risks to mobile tropical marine snails: are eco-engineered rock pools on seawalls scale-specific enough for comprehensive biodiversity outcomes? Marine Pollution Bulletin, 156. 111237.

Waltham, Nathan J., Elliott, Michael, Lee, Shing Yip, Lovelock, Catherine, Duarte, Carlos M., Buelow, Christina, Simenstad, Charles, Nagelkerken, Ivan, Claassens, Louw, Wen, Colin K.-C., Barletta, Mario, Connolly, Rod, Gillies, Christopher, Mitsch, William, Ogburn, Matthew B., Purandare, Jemma, Possingham, Hugh, and Sheaves, Marcus (2020) UN decade on ecosystem restoration 2021-2020 - what chance for success in restoring coastal ecosystems? Frontiers in Marine Science, 7. 71. pp. 1-5.

Iles, J.A., and Waltham, N.J. (2020) Whitsunday Water Quality Monitoring Blueprint for Tourism Operators: Quarterly update - July 2020: A Report for Reef Catchments (Mackay Whitsunday Isaac) Limited. Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Sheaves, Marcus, Abrantes, Katya, Barnett, Adam, Benham, Claudia, Dale, Patricia, Mattone, Carlo, Sheaves, Alison, Waltham, Nathan, and Bradley, Michael (2020) The consequences of paradigm change and poorly validated science: the example of the value of mangroves to fisheries. Fish and Fisheries, 21 (5). pp. 1067-1075.

Dubuc, Alexia, Baker, Ronald, Marchand, Cyril, Waltham, Nathan J., and Sheaves, Marcus (2019) Hypoxia in mangroves: occurrence and impact on valuable tropical fish habitat. Biogeosciences, 16 (20). pp. 3959-3976.

Dunn, Ryan J.K., Welsh, David T., Teasdale, Peter R., Gilbert, Franck, Poggiale, Jean-Christopher, and Waltham, Nathan J. (2019) Effects of the bioturbating marine yabby Trypaea australiensis on sediment properties in sandy sediments receiving mangrove leaf litter. Journal of Marine Science and Engineering, 7 (12). 426.

Folan, Anthony, Fischer, Justin, Waltham, Nathan, and Horton, Peter (2019) Flying fish point rock revetment upgrade: application of 'green engineering', fish friendly features and other innovative measures. In: Proceedings of the Australasian Coasts and Ports 2019 Conference. pp. 411-417. From: Australasian Coasts and Ports 2019 Conference, 10-13 September 2019, Hobart, TAS, Australia.

Waltham, Nathan J., Burrows, Damien, Wegscheidl, Carla, Buelow, Christina, Ronan, Mike, Connolly, Niall, Groves, Paul, Marie-Audas, Donna, Creighton, Colin, and Sheaves, Marcus (2019) Lost floodplain wetland environments and efforts to restore connectivity, habitat, and water quality settings on the Great Barrier Reef. Frontiers in Marine Science, 6. 71. pp. 1-14.

Adame, Maria Fernanda, Arthington, Angela, Waltham, Nathan, Hasan, Syezlin, Selles, Amelia, and Ronan, Mike (2019) Managing threats and restoring wetlands within catchments of the Great Barrier Reef, Australia. Aquatic Conservation: marine and freshwater ecosystems, 29. pp. 829-839.

Adame, M.F., Franklin, H., Waltham, N.J., Rodriguez, S., Kavehei, E., Turschwell, M.P., Balcombe, S.R., Kaniewski, P., Burford, M.A., and Ronan, M. (2019) Nitrogen removal by tropical floodplain wetlands through denitrification. Marine and Freshwater Research, 70. pp. 1513-1521.

Dubuc, Alexia, Waltham, Nathan J., Baker, Ronald, Marchand, Cyril, and Sheaves, Marcus (2019) Patterns of fish utilisation in a tropical IndoPacific mangrove-coral seascape, New Caledonia. PLoS ONE, 14 (4). e0207168.

Dunn, Ryan J.K., Waltham, Nathan J., Huang, Jianyin, Teasdale, Peter R., and King, Brian A. (2019) Protecting water quality in urban estuaries: Australian case studies. In: Wolanski, Eric, Day, John W., Elliott, Michael, and Ramachandran, Ramesh, (eds.) Coasts and Estuaries: the future. Elsevier, Oxford, United Kingdom, pp. 69-86.

von Schiller, D., Datry, T., Corti, R., Foulquier, A., Tockner, K., Marcé, R., García-Baquero, G., Odriozola, I., Obrador, B., Elosegi, A., Mendoza-Lera, C., Gessner, M.O., Stubbington, R., Albariño, R., Allen, D.C., Altermatt, F., Arce, M., Arnon, S., Banas, D., Banegas-Medina, A., Beller, E., Blanchette, M.L, Blanco-Libreros, J.F., Blessing, J., Boëchat, I., Boersma, K., Bogan, M.T., Bonada, N., Bond, N., Brintrup, K., Bruder, A., Burrows, R.M., Cancellario, T., Carlson, S., Cauvy-Fraunié, S., Cid, N., Danger, M., de Freitas Terra, B., Dehedin, A., De Girolamo, A.M., del Campo, R., Díaz-Villanueva, V., Duerdoth, C., Dyer, F., Faye, E., Febria, C., Figueroa, R., Four, B., Gafny, S., Gómez, R., Gómez-gener, L., Graça, M.A.S., Guareschi, S., Gücker, B., Hoppeler, F., Hwan, J.L, Kubheka, S., Laini, A., Langhans, S.D, Leigh, C., Little, C.J., Lorenz, S., Marshall, J., Martín, E.J., Mcintosh, A., Meyer, E.I., Miliša, M., Mlambo, M.C., Moleón, M., Morais, M., Negus, P., Niyogi, D., Papatheodoulou, A., Pardo, I., Pařil, P., Pešić, V., Piscart, C., Polášek, M., Rodríguez-Lozano, P., Rolls, R.J., Sánchez-Montoya, M.M., Savić, A., Shumilova, O., Steward, A., Taleb, A., Uzan, A., Vander Vorst, R., Waltham, N., Woelfle-Erskine, C., Zak, D., Zarfl, C., and Zoppini, A. (2019) Sediment respiration pulses in intermittent rivers and ephemeral streams. Global Biogeochemical Cycles, 33 (10). pp. 1251-1263.

Shumilova, Oleksandra, Zak, Dominik, Datry, Thibault, von Schiller, Daniel, Corti, Roland, Foulquier, Arnaud, Obrador, Biel, Tockner, Klement, Allan, Daniel C., Altermatt, Florian, Arce, María Isabel, Arnon, Shai, Banas, Damien, Banegas-Medina, Andy, Beller, Erin, Blanchette, Melanie L., Blanco-Libreros, Juan F., Blessing, Joanna, Boëchat, Iola Gonçalves, Boersma, Kate, Bogan, Michael T., Bonada, Núria, Bond, Nick R., Brintrup, Kate, Bruder, Andreas, Burrows, Ryan, Cancellario, Tommaso, Carlson, Stephanie M., Cauvy-Fraunié, Sophie, Cid, Núria, Danger, Michael, de Freitas Terra, Bianca, De Girolamo, Anna Maria, del Campo, Ruben, Dyer, Fiona, Elosegi, Arturo, Faye, Emile, Febria, Catherine, Figueroa, Richardo, Four, Brian, Gessner, Mark O., Gnohossou, Pierre, Cerezo, Rosa Gómez, Gomez-Gener, Lluís, Graça, Manuel A.S., Guareschi, Simone, Gücker, Björn, Hwan, Jason L., Kubheka, Skhumbuzo, Langhans, Simone Daniela, Leigh, Catherine, Little, Chelsea J., Lorenz, Stefan, Marshall, Jonathan, McIntosh, Angus, Mendoza-Lera, Clara, Meyer, Elisabeth Irmgard, Miliša, Marko, Mlambo, Musa C., Moleón, Marcos, Negus, Peter, Niyogi, Dev, Papatheodoulou, Athina, Pardo, Isabel, Paril, Petr, Pešić, Vladimir, Rodriguez-Lozano, Pablo, Rolls, Robert J., Sanchez-Montoya, Maria Mar, Savić, Ana, Steward, Alisha, Stubbington, Rachel, Taleb, Amina, Vander Vorste, Ross, Waltham, Nathan, Zoppini, Annamaria, and Zarfl, Christiane (2019) Simulating rewetting events in intermittent rivers and ephemeral streams: a global analysis of leached nutrients and organic matter. Global Change Biology, 25 (5). pp. 1591-1611.

Waltham, Nathan J., and Dafforn, Katherine A. (2018) Ecological engineering in the coastal seascape. Ecological Engineering, 120. pp. 554-559.

Waltham, Nathan J. (2018) Acute thermal effects in an inland freshwater crab Austrothelphusa transversa (von Martens, 1868) occupying seasonal, tropical rivers. Journal of Crustacean Biology, 38 (4). pp. 497-503.

Waltham, Nathan J., and Sheaves, Marcus (2018) Eco-engineering rock pools to a seawall in a tropical estuary: microhabitat features and fine sediment accumulation. Ecological Engineering, 120. pp. 631-636.

Naser, Murtada D., Davie, Peter J. F., and Waltham, Nathan J. (2018) Redescription of Austrothelphusa wasselli (Bishop, 1963) (Crustacea: Brachyura: Gecarcinucidae), and designation of a new species from the Gilbert River, north Queensland, Australia. Zootaxa, 4369 (1). pp. 109-127.

Waltham, Nathan J., and Schaffer, Jason R. (2018) Thermal and asphyxia exposure risk to freshwater fish in feral-pig-damaged tropical wetlands. Journal of Fish Biology, 93 (4). pp. 723-728.

Waltham, N.J., Schaffer, J., Buist, J., Geyle, M., and Toby, D. (2018) Working with land and sea rangers to tackle tropical wetland restoration and conservation on the north-western islands, Torres Straits, Australia. Wetlands Ecology and Management, 26 (6). pp. 1143-1156.

Datry, T., Foulquier, A., Corti, R., von Schiller, D., Tockner, K., Mendoza-Lera, C., Clement, J.C., Gessner, M.O., Moleon, M., Stubbington, R., Gucker, B., Albarino, R., Allen, D.C., Altermatt, F., Arce, M.I., Arnon, S., Banas, D., Banegas-Medina, A., Beller, E., Blanchette, M.L., Blanco-Libreros, J.F., Blessing, J.J., Boechat, I.G., Boersma, K.S., Bogan, M.T., Bonada, N., Bond, N.R., Brintrup Barria, K.C., Bruder, A., Burrows, R.M., Cancellario, T., Canhoto, C., Carlson, S.M., Cauvy-Fraunie, S., Cid, N., Danger, M., de Freitas Terra, Bianca, De Girolamo, A.M., de La Barra, Evans, del Campo, R., Diaz-Villanueva, V.D., Dyer, F., Elosegi, A., Faye, E., Febria, C., Four, B., Gafny, S., Ghate, S.D., Gomez, R., Gomez-Gener, L., Graça, M.A.S., Guareschi, S., Hoppeler, F., Hwan, J.L., Kubheka, S., Laini, A., Langhans, S.D., Leigh, C., Little, C.J., Lorenz, S., Marshall, J.C., Martin, E., McIntosh, A.R., Meyer, E.I., Milisa, M., Mlambo, M.C., Morais, M., Moya, N., Negus, P.M., Niyogi, D.K., Papatheodoulou, A., Pardo, I., Paril, P., Pauls, S.U., Pesic, V., Polasek, M., Robinson, C.T., Rodriguez-Lozano, P., Rolls, R.J., Sanchez-Montoya, M.M., Savic, A., Shumilova, O., Shridhar, K.R., Steward, A.L., Storey, R., Taleb, A., Uzan, A., Vander Vorste, Ross, Waltham, Nathan, Woelfle-Erskine, C., Zak, D., Zarfl, C., and Zoppini, A. (2018) A global analysis of terrestrial plant litter dynamics in non-perennial waterways. Nature Geoscience, 11. pp. 497-503.

Waltham, N.J., and Fixler, S. (2017) Aerial herbicide spray to control invasive water hyacinth (Eichhornia crassipes): water quality concerns fronting fish occupying a tropical floodplain wetland. Tropical Conservation Science, 10.

Waltham, Nathan J., and Sheaves, Marcus (2017) Acute thermal tolerance of tropical estuarine fish occupying a man-made tidal lake, and increased exposure risk with climate change. Estuarine, Coastal and Shelf Science, 196. pp. 173-181.

James, Cassandra S., Reside, April E., VanDerWal, Jeremy, Pearson, Richard G., Burrows, Damien, Capon, Samatha J., Harwood, Thomas D., Hodgson, Lauren, and Waltham, Nathan J. (2017) Sink or swim? potential for high faunal turnover in Australian rivers under climate change. Journal of Biogeography, 44 (3). pp. 489-501.

Smith, Yanni, Waltham, Nathan, and Kane, Kevin (2017) Environmental report cards for heavy industry in the Great Barrier Reef lagoon. In: Proceedings of the Australasian Coasts & Ports 2017 Conference. pp. 999-1004. From: Australasian Coasts & Ports 2017 Conference: working with nature, 21-23 June 2017, Cairns, QLD, Australia.

Dubuc, Alexia, Waltham, Nathan, Malerba, Martino, and Sheaves, Marcus (2017) Extreme dissolved oxygen variability in urbanised tropical wetlands: the need for detailed monitoring to protect nursery ground values. Estuarine, Coastal and Shelf Science, 198 (Part A). pp. 163-171.

Waltham, Nathan, York, Paul, McKenna, Skye, Petus, Caroline, Devlin, Michelle, Rasheed, Michael, Campbell, Sean, Whinney, James, and Kane, Kevin (2017) Long term ambient water quality monitoring to support port management in the Great Barrier Reef World Heritage Area. In: Proceedings of the Australasian Coasts & Ports 2017 Conference. pp. 1125-1130. From: Australasian Coasts & Ports 2017 Conference: working with nature, 21-23 June 2017, Cairns, QLD, Australia.

Dunn, Ryan J.K., Waltham, Nathan, Teasdale, Peter R., Roberston, David, and Welsh, David T. (2017) Short-term nitrogen and phosphorus release during the disturbance of surface sediments: a case study in an urbanised estuarine system (Gold Coast Broadwater, Australia). Journal of Marine Science and Engineering, 5 (2). pp. 1-13.

Harding, Sandra, Trewin, Dennis, Penny, Ann, Ziembicki, Mark, Dale, Allan, Ustan, Taha Sellin, Tan, David, Waltham, Nathan, Laurance, William F., Ceclia, Rogas, Yong, Wik Diew, Kuah, Adrian T., Hassan, Suhaimy, Mcjannet, Kelly, Langston, James, Riggs, Rebecca, Mohd Sharif, Dato' Maimunah, and Jamaludin, Siti Rohaidah (2017) State of the Tropics 2017 report: sustainable infrastructure in the tropics. Report. James Cook University, Townsville, QLD, Australia.

Wallace, Jim, Waltham, Nathan, and Burrows, Damien (2017) A comparison of temperature regimes in dry-season waterholes in the Flinders and Gilbert catchments in northern Australia. Marine and Freshwater Research, 68 (4). pp. 650-667.

Sheaves, Marcus, Coles, Rob, Dale, Pat, Grech, Alana, Pressey, Robert L., and Waltham, Nathan J. (2016) Enhancing the value and validity of EIA: serious science to protect Australia's Great Barrier Reef. Conservation Letters, 9 (5). pp. 377-383.

Waltham, Nathan (2016) Unravelling life history of the Inland Freshwater Crab Austrothelphusa transversa in seasonal tropical river catchments. Australian Zoologist, 38 (2). pp. 217-222.

Waltham, Nathan, McKenna, Skye, York, Paul, Devlin, Michelle, Campbell, Sean, Rasheed, Michael, Da Silva, Eduardo, Petus, Caroline, and Ridd, Peter (2015) Port of Mackay and Hay Point Ambient Marine Water Quality Monitoring Program (July 2014 to July 2015). Report. TropWATER, James Cook University, Townsville, QLD, Australia.

Connolly, Rod M., and Waltham, Nathan J. (2015) Spatial analysis of carbon isotopes reveals seagrass contribution to fishery food web. Ecosphere, 6 (9). 148. pp. 1-12.

Dafforn, Katherine A., Mayer-Pinto, Mariana, Morris, Rebecca L., and Waltham, Nathan J. (2015) Application of management tools to integrate ecological principles with the design of marine infrastructure. Journal of Environmental Management, 158. pp. 61-73.

Waltham, Nathan J., and Sheaves, Marcus (2015) Expanding coastal urban and industrial seascape in the Great Barrier Reef World Heritage Area: critical need for coordinated planning and policy. Marine Policy, 57. pp. 78-84.

Wallace, Jim, Waltham, Nathan, Burrows, Damien, and McJannet, David (2015) The temperature regimes of dry-season waterholes in tropical northern Australia: potential effects on fish refugia. Freshwater science, 34 (2). pp. 663-678.

Waltham, Nathan J., and Sheaves, Marcus (2015) Expanding urban and industrial development in tropical seascapes necessitates green engineering and spatial planning thinking. Environmental Science and Technology, 49 (5). pp. 2598-2599.

Waltham, Nathan, Barry, Michael, McAlister, Tony, Weber, Tony, and Groth, Dominic (2014) Protecting the green behind the gold: catchment-wide restoration efforts necessary to achieve nutrient and sediment load reduction targets in Gold Coast City, Australia. Environmental Management, 54 (4). pp. 840-851.

Waltham, Nathan J., Hughes, Jane M., and Davie, Peter J.F. (2014) Freshwater crabs occupying tropical north Queensland coastal creeks. Australian Zoologist, 37 (2). pp. 256-262.

Dunn, Ryan J.K., Waltham, Nathan J., Benfer, Nathan P., King, Brian A., Lemckert, Charles J., and Zigic, Sasha (2014) Gold Coast Broadwater: southern Moreton Bay, Southeast Queensland (Australia). In: Wolanski, Eric, (ed.) Estuaries of Australia in 2050 and Beyond. Estuaries of the World . Springer, Dordrecht, The Netherlands, pp. 93-110.

Waltham, Nathan J., Reichelt-Brushett, Amanda, McCann, Damian, and Eyre, Bradley D. (2014) Water and sediment quality, nutrient biochemistry and pollution loads in an urban freshwater lake: balancing human and ecological services. Environmental Science Processes and Impacts, 16 (12). pp. 2804-2813.

Waltham, Nathan J., Burrows, Damien, Butler, Barry, and Wallace, Jim (2014) Water quality and fish refugia in riverine waterholes in northern Queensland potentially subject to irrigation development. In: Proceedings of the 7th Australian Stream Management Conference. pp. 150-155. From: 7th Australian Stream Management Conference: catchment to coast, 27-30 July 2014, Townsville, QLD, Australia.

Dunn, Ryan J.K., Robertson, David, Teasdale, Peter R., Waltham, Nathan J., and Welsh, David T. (2013) Benthic metabolism and nitrogen dynamics in an urbanised tidal creek: domination of DNRA over denitrificDunnation as a nitrate reduction pathway. Estuarine, Coastal and Shelf Science , 131. pp. 271-281.

Waltham, Nathan J., Teasdale, Peter R., and Connolly, Rod M. (2013) Use of flathead mullet (Mugil cephalus) in coastal biomonitor studies: review and recommendations for future studies. Marine Pollution Bulletin, 69 (1-2). pp. 195-205.

Waltham, Nathan J., and Connolly, Rod M. (2013) Artificial tidal lakes: built for humans, home for fish. Ecological Engineering, 60. pp. 414-420.

James, Cassandra, Vanderwal, Jeremy, Capon, Samantha, Hodgson, Lauren, Waltham, Nathan, Ward, Doug, Anderson, Barbara, and Pearson, Richard (2013) Identifying Climate Refuges for Freshwater Biodiversity Across Australia: identification and characterisation of freshwater refuges in the face of climate change. National Climate Change Adaptation Research Facility, Gold Coast, QLD, Australia.

Dunn, Ryan J.K., Welsh, David T., Jordan, Mark A., Waltham, Nathan J., Lemckert, Charles J., and Teasdale, Peter R. (2012) Benthic metabolism and nitrogen dynamics in a sub-tropical coastal lagoon: microphytobenthos stimulate nitrification and nitrate reduction through photosynthetic oxygen evolution. Estuarine, Coastal and Shelf Science , 113. pp. 272-282.