Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Jones, Geoffrey P., Puotinen, Marji, Petus, Caroline, Russ, Garry R., Srinivasan, Maya, and Williamson, David H. (2023) Physical, biological and anthropogenic drivers of spatial patterns of coral reef fish assemblages at regional and local scales. Science of the Total Environment, 904. 166695.

Smallhorn-West, Patrick F., Cohen, Philippa J., Morais, Renato A., Januchowski-Hartley, Fraser A., Ceccarelli, Daniela, Malimali, Siola'a, Stone, Karen, Warren, Regon, and Cinner, Joshua E. (2022) Hidden benefits and risks of partial protection for coral reef fisheries. Ecology and Society, 27 (1). 26.

Ceccarelli, Daniela M., Davey, Kate, Jones, Geoffrey P., Harris, Peter, Matoto, Sione V., Raubani, Jason, and Fernandes, Leanne (2021) How to meet new global targets in the offshore realms: biophysical guidelines for offshore networks of no-take marine protected areas. Frontiers in Marine Science, 8. 634574.

McLeod, Ian M., Bourne, David, Ceccarelli, Daniela M., Boström-Einarsson, Lisa, Cook, Nathan, Fulton, Stella E., Hancock, Boze, Harrison, Peter, Hein, Margaux, Le Port, Agnès, Paewai-Higgins, Roma, Smith, Hillary A., and Smith, Adam (2020) Best practice coral restoration for the Great Barrier Reef. Report. Reef and Rainforest Research Centre Limited (RRRC), Cairns, QLD, Australia.

Smallhorn-West, Patrick, Gordon, Sophie, Stone, Karen, Ceccarelli, Daniela, Malimali, Siola'a, Halafihi, Tu'ikolongahau, Wyatt, Mathew, Bridge, Tom, Pressey, Robert, and Jones, Geoffrey (2020) Biophysical and anthropogenic influences on the status of Tonga's coral reefs and reef fish fishery. PLoS One, 15 (11). e0241146.

Smallhorn-West, Patrick F., Stone, Karen, Ceccarelli, Daniela M., Malimali, Siola'a, Halafihi, Tu'ikolongahau, Bridge, Tom C. L., Pressey, Robert L., and Jones, Geoffrey P. (2020) Community management yields positive impacts for coastal fisheries resources and biodiversity conservation. Conservation Letters, 13. e12755.

Lowe, J. R., Williamson, D. H., Ceccarelli, D. M., Evans, R. D., and Russ, G. R. (2020) Environmental disturbance events drive declines in juvenile wrasse biomass on inshore coral reefs of the Great Barrier Reef. Environmental Biology of Fishes, 103. pp. 1279-1293.

Edgar, Graham J., Cooper, Antonia, Baker, Susan C., Barker, William, Barrett, Neville S., Becerro, Mikel A., Bates, Amanda E., Brock, Danny, Ceccarelli, Daniela M., Clausius, Ella, Davey, Marlene, Davis, Tom R., Day, Paul B., Green, Andrew, Griffiths, Samuel R., Hicks, Jamie, Hinojosa, Iván A., Jones, Ben K., Kininmonth, Stuart, Larkin, Meryl F., Lazzari, Natali, Lefcheck, Jonathan S., Ling, Scott D., Mooney, Peter, Oh, Elizabeth, Pérez-Matus, Alejandro, Pocklington, Jacqueline B., Riera, Rodrigo, Sanabria-Fernandez, Jose A., Seroussi, Yanir, Shaw, Ian, Shields, Derek, Shields, Joe, Smith, Margo, Soler, German A., Stuart-Smith, Jemina, Turnbull, John, and Stuart-Smith, Rick D. (2020) Establishing the ecological basis for conservation of shallow marine life using Reef Life Survey. Biological Conservation, 252. 108855.

Ceccarelli, Daniela M., McLeod, Ian M., Boström-Einarsson, Lisa, Bryan, Scott E., Chartrand, Kathryn M., Emslie, Michael J., Gibbs, Mark T., Gonzalez Rivero, Manuel, Hein, Margaux Y., Heyward, Andrew, Kenyon, Tania M., Lewis, Brett M., Newlands, Maxine, Mattocks, Neil, Schläppy, Marie-Lise, Suggett, David J., and Bay, Line K. (2020) Substrate stabilisation and small structures in coral restoration: state of knowledge, and considerations for management and implementation. PLoS ONE, 15 (10). e0240846.

McLeod, Ian M., Williamson, David H., Taylor, Sascha, Srinivasan, Maya, Read, Mark, Boxer, Craig, Mattocks, Neil, and Ceccarelli, Daniela M. (2019) Bommies away! Logistics and early effects of repositioning 400 tonnes of displaced coral colonies following cyclone impacts on the Great Barrier Reef. Ecological Management and Restoration, 20 (3). pp. 262-265.

Ceccarelli, Daniela M., Evans, Richard D., Logan, Murray, Mantel, Philippa, Puotinen, Marji, Petus, Caroline, Russ, Garry R., and Williamson, David H. (2019) Long-term dynamics and drivers of coral and macroalgal cover on inshore reefs of the Great Barrier Reef Marine Park. Ecological Applications. e02008.

Lowe, J.R., Williamson, D.H., Ceccarelli, D.M., Evans, R.D., and Russ, G.R. (2019) Responses of coral reef wrasse assemblages to disturbance and marine reserve protection on the Great Barrier Reef. Marine Biology, 166 (9). 119.

Strain, Elisabeth M.A., Edgar, Graham J., Ceccarelli, Daniela, Stuart-smith, Rick D., Hosack, Geoffrey R., and Thomson, Russell J. (2019) A global assessment of the direct and indirect benefits of marine protected areas for coral reef conservation. Diversity and Distributions, 25 (1). pp. 9-20.

Boström‐Einarsson, Lisa, Ceccarelli, Daniela, Babcock, Russell C., Bayraktarov, Elisa, Cook, Nathan, Harrison, Peter, Hein, Margaux, Shaver, Elizabeth, Smith, Adam, Stewart-Sinclair, Phoebe J., Vardi, Tali, and McLeod, Ian M. (2018) Coral restoration in a changing world - a global synthesis of methods and techniques. Report. Reef and Rainforest Research Centre Ltd, Cairns.

Stuart-Smith, Rick D., Brown, Christopher J., Ceccarelli, Daniela M., and Edgar, Graham J. (2018) Ecosystem restructuring along the Great Barrier Reef following mass coral bleaching. Nature, 560. pp. 92-107.

Ceccarelli, Daniela M., Loffler, Zoe, Bourne, David G., Al Moajil-Cole, Grace S., Boström Einarsson, Lisa, Evans-Illidge, Elizabeth, Fabricius, Katharina, Glasl, Bettina, Marshall, Paul, McLeod, Ian, Read, Mark, Schaffelke, Britta, Smith, Adam K., Jorda, Georgina T., Williamson, David H., and Bay, Line (2018) Rehabilitation of coral reefs through removal of macroalgae: state of knowledge and considerations for management and implementation. Restoration Ecology, 26 (5). pp. 827-838.

Martin, Tyson S.H., Connolly, Rod M., Olds, Andrew D., Ceccarelli, Daniela M., Fenner, Douglas E., Schlacher, Thomas A., and Beger, Maria (2017) Subsistence harvesting by a small community does not substantially compromise coral reef fish assemblages. ICES Journal of Marine Science, 74 (8). pp. 2191-2200.

Lamb, Joleah B., Wenger, Amelia S., Devlin, Michelle J., Ceccarelli, Daniela M., Williamson, David H., and Willis, Bette L. (2016) Reserves as tools for alleviating impacts of marine disease. Philosophical Transactions of the Royal Society B: Biological Sciences, 371 (1689). pp. 1-11.

Wenger, Amelia S., Williamson, David H., da Silva, Eduardo T., Ceccarelli, Daniela M., Browne, Nicola, Petus, Caroline, and Devlin, Michelle J. (2016) Effects of reduced water quality on coral reefs in and out of no-take marine reserves. Conservation Biology, 30 (1). pp. 142-153.

Brandl, Simon J., Emslie, Michael J, Ceccarelli, Daniela M., and Richards, Zoe T. (2016) Habitat degradation increases functional originality in highly diverse coral reef fish assemblages. Ecosphere, 7 (11). e01557. pp. 1-19.

Ceccarelli, Daniela M., Emslie, Michael J., and Richards, Zoe T. (2016) Post-disturbance stability of fish assemblages measured at coarse taxonomic resolution masks change at finer scales. PLoS One, 11 (6). e0156232. pp. 1-22.

Welch, Heather, Pressey, Robert L., Heron, Scott F., Ceccarelli, Daniela M., and Hobday, Alistair J. (2016) Regimes of chlorophyll-a in the Coral Sea: implications for evaluation adequacy of marine protected areas. Ecography, 39 (3). pp. 289-304.

Young, Jock W., Hunt, Brian P.V., Cook, Timothée R., Llopiz, Joel K., Hazen, Elliott L., Pethybridge, Heidi R., Ceccarelli, Daniela, Lorrain, Anne, Olson, Robert J., Allain, Valerie, Menkes, Christophe, Patterson, Toby, Nicol, Simon, Lehodey, Patrick, Kloser, Rudy J., Arrizabalaga, Haritz, and Choy, C. Anela (2015) The trophodynamics of marine top predators: current knowledge, recent advances and challenges. Deep-Sea Research Part II: topical studies in oceanography, 113. pp. 170-187.

Emslie, Michael J., Logan, Murray, Williamson, David H., Ayling, Anthony M., MacNeil, M. Aaron, Ceccarelli, Daniela, Cheal, Alistair J., Evans, Richard D., Johns, Kerryn A, Jonker, Michelle J., Miller, Ian R., Osborne, Kate, Russ, Garry R., and Sweatman, Hugh P.A. (2015) Expectations and outcomes of reserve network performance following re-zoning of the Great Barrier Reef Marine Park. Current Biology, 25 (8). pp. 983-992.

Williamson, David H., Ceccarelli, Daniela M., Evans, Richard D., Hill, Jos K., and Russ, Garry R. (2014) Derelict fishing line provides a useful proxy for estimating levels of non-compliance with no-take marine reserves. PLoS One, 9 (12). e114395. pp. 1-21.

Reside, April E., Ceccarelli, Daniela M., Isaac, Joanne L., Hilbert, David W., Moran, Cath, Llewelyn, John, Macdonald, Stewart, Hoskin, Conrad J., Pert, Petina, and Parsons, Jennifer (2014) Biodiversity: adaptation pathways and opportunities. In: Moran, Catherine, Turton, Stephen M., and Hill, Rosemary, (eds.) Adaptation Pathways and Opportunities for the Wet Tropics NRM Cluster Region: volume 1: introduction, biodiversity and ecosystem services. James Cook University, Cairns, QLD, Australia, pp. 11-74.

Williamson, David H., Ceccarelli, Daniela M., Evans, Richard D., Jones, Geoffrey P., and Russ, Garry R. (2014) Habitat dynamics, marine reserve status, and the decline and recovery of coral reef fish communities. Ecology and Evolution, 4 (4). pp. 337-354.

Ceccarelli, Daniela M., Frisch, Ashley J., Graham, Nicholas A.J., Ayling, Anthony M., and Beger, Maria (2014) Habitat partitioning and vulnerability of sharks in the Great Barrier Reef Marine Park. Reviews in Fish Biology and Fisheries, 24 (1). pp. 169-197.

Ceccarelli, Daniela M., McKinnon, A. David, Andréfouët, Serge, Allain, Valerie, Young, Jock, Gledhill, Daniel C., Flynn, Adrian, Bax, Nicholas J., Beaman, Robin, Borsa, Philippe, Brinkman, Richard, Bustamante, Rodrigo H., Campbell, Robert, Cappo, Mike, Cravatte, Sophie, D'Agata, Stéphanie, Dichmont, Catherine M., Dunstan, Piers K., Dupouy, Cécile, Edgar, Graham, Farman, Richard, Furnas, Miles, Garrigue, Claire, Hutton, Trevor, Kulbicki, Michel, Letourneur, Yves, Lindsay, Dhugal, Menkes, Christophe, Mouillot, David, Parravicini, Valeriano, Payri, Claude, Pelletier, Bernard, Richer de Forges, Bertrand, Ridgway, Ken, Rodier, Martine, Samadi, Sarah, Schoeman, David, Skewes, Tim, Swearer, Steven, Vigliola, Laurent, Wantiez, Laurent, Williams, Alan, Williams, Ashley, and Richardson, Anthony J. (2013) The Coral Sea: physical environment, ecosystem status and biodiversity assets. In: Lesser, Michael, (ed.) Advances in Marine Biology. Advances in Marine Biology, 66 . Elsevier, Amsterdam, The Netherlands, pp. 213-290.

Lukoschek, Vimoksalehi, Beger, Maria, Ceccarelli, Daniela, Richards, Zoe, and Pratchett, Morgan (2013) Enigmatic declines of Australia's sea snakes from a biodiversity hotspot. Biological Conservation, 166. pp. 191-202.

Emslie, M.J., Logan, M., Ceccarelli, D.M., Cheal, A.J., Hoey, A.S., Miller, I., and Sweatman, H.P.A. (2012) Regional-scale variation in the distribution and abundance of farming damselfishes on Australia's Great Barrier Reef. Marine Biology, 159 (6). pp. 1293-1304.

Ceccarelli, D.M., and Williamson, D.H. (2012) Sharks that eat sharks: opportunistic predation by wobbegongs. Coral Reefs, 31 (2). p. 471.

Young, Jock W., McKinnon, A. David, Ceccarelli, Daniela, Brinkman, Richard, Bustamante, Rodrigo H., Cappo, Mike, Dichmont, Cathy, Doherty, Peter, Furnas, Miles, Gledhill, Daniel, Griffiths, Shane, Hutton, Trevor, Ridgway, Ken, Smith, David, Skewes, Tim, Williams, Alan, and Richardson, Anthony J. (2012) Workshop on the ecosystem and fisheries of the Coral Sea: an Australian perspective on research and management. Reviews in Fish Biology and Fisheries, 22 (3). pp. 827-834.

Ceccarelli, D.M., Richards, Z.T., Pratchett, M.S., and Cvitanovic, C. (2011) Rapid increase in coral cover on an isolated coral reef, the Ashmore Reef National Nature Reserve, north-western Australia. Marine and Freshwater Research, 62 (10). pp. 1214-1220.

Ceccarelli, Daniela, Beger, Maria, Kospartov, Marie, Richards, Zoe, and Birrell, Chico (2011) Population trends of remote invertebrate resources in a marine reserve: trochus and holothurians at Ashmore Reef. Pacific Conservation Biology, 17 (2). pp. 132-140.

Ceccarelli, D.M., Jones, G.P, and McCook, L.J. (2011) Interactions between herbivorous fish guilds and their influence on algal succession on a coastal coral reef. Journal of Experimental Marine Biology and Ecology, 399 (1). pp. 60-67.

Barneche, Diego R., Floeter, S.R., Ceccarelli, D.M., Frensel, D.M.B., Dinslaken, D.F., Mario, H.F.S., and Ferreira, C.E.L. (2009) Feeding macroecology of territorial damselfishes (Perciformes: Pomacentridae). Marine Biology, 156 (3). pp. 289-299.

Ceccarelli, D., Choat, J.H., Ayling, A., Richards, Z.T., Van Herwerden, L., Ewel, G.D., Hobbs, J-P., and Cuff, B. (2008) Coringa-Herald National Nature Reserve Marine Survey 2007. Report. Department of the Environment, Water, Heritage and the Arts, Canberra, ACT, Australia.

Ceccarelli, D.M. (2007) Modification of benthic communities by territorial damselfish: a multi-species comparison. Coral Reefs, 26 (4). pp. 853-866.

Hughes, Terence P., Rodrigues, Maria J., Bellwood, David R., Ceccarelli, Daniela, Hoegh-Guldberg, Ove, McCook, Laurence, Moltschaniwskyj, Natalie, Pratchett, Morgan S., Steneck, Robert S., and Willis, Bette (2007) Phase shifts, herbivory, and the resilience of coral reefs to climate change. Current Biology, 17 (4). pp. 360-365.

Ceccarelli, Daniela M., Hughes, Terry P., and McCook, Laurence J. (2006) Impacts of simulated overfishing on the territoriality of coral reef damselfish. Marine Ecology Progress Series, 309. pp. 255-256.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Effects of territorial damselfish on an algal-dominated coastal coral reef. Coral Reefs, 24 (4). pp. 606-620.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2005) Foragers versus farmers: contrasting effects of two behavioural groups of herbivores on coral reefs. Oecologia, 145 (3). pp. 445-453.

Ceccarelli, Daniela Monica (2004) Herbivorous fishes as determinants of the structure of coral reef communities: farmers, foragers and their interactions. PhD thesis, James Cook University.

Ceccarelli, Daniela M., Jones, Geoffrey P., and McCook, Laurence J. (2001) Territorial damselfishes as determinants of the structure of benthic communities on coral reefs. Oceanography and Marine Biology: an annual review, 39. pp. 355-389.