Fuzzy clustering of stochastic models for molecular phylogenetics
Pham, Tuan D., Beck, Dominik, and Crane, Denis I. (2005) Fuzzy clustering of stochastic models for molecular phylogenetics. WSEAS Transactions on Biology and Biomedicine, 2 (1). pp. 87-91.
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A new method for the study of molecular phylogenetics based on fuzzy c-means clustering of Markov models is proposed. This approach is able to cluster whole sequences or genomes into groups whose boundaries overlap, and to reconstruct the phylogenetic trees that graphically describe the evolutionary relationships between organisms. The method is applied to examine the similarities and evolutionary relationships of a large data set of complet.e mammalian mitochondrial genomes.
|Item Type:||Article (Refereed Research - C1)|
|Keywords:||fuzzy c-means; Markov models,; molecular phylogeny; systems biology|
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|Date Deposited:||03 Dec 2010 03:11|
|FoR Codes:||08 INFORMATION AND COMPUTING SCIENCES > 0899 Other Information and Computing Sciences > 089999 Information and Computing Sciences not elsewhere classified @ 100%|
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